Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2858:2926
Extra
PDB:
ATOM 1 O3' G A 857 -58.357 -0.861 125.083 1.00 87.20 O
ATOM 2 P G A 858 -57.600 -2.008 125.917 1.00 94.78 P
ATOM 3 OP1 G A 858 -58.601 -3.022 126.286 1.00 96.07 O
ATOM 4 OP2 G A 858 -56.840 -1.337 126.998 1.00 95.09 O
ATOM 5 O5' G A 858 -56.594 -2.604 124.842 1.00 93.85 O
ATOM 6 C5' G A 858 -55.193 -2.513 125.044 1.00 93.52 C
ATOM 7 C4' G A 858 -54.435 -2.494 123.743 1.00 92.15 C
ATOM 8 O4' G A 858 -54.691 -3.713 123.009 1.00 92.36 O
ATOM 9 C3' G A 858 -54.795 -1.392 122.756 1.00 90.79 C
ATOM 10 O3' G A 858 -54.195 -0.151 123.072 1.00 90.15 O
ATOM 11 C2' G A 858 -54.298 -1.973 121.445 1.00 89.91 C
ATOM 12 O2' G A 858 -52.883 -1.865 121.360 1.00 89.36 O
ATOM 13 C1' G A 858 -54.655 -3.446 121.624 1.00 91.05 C
ATOM 14 N9 G A 858 -55.971 -3.756 121.067 1.00 91.21 N
ATOM 15 C8 G A 858 -57.135 -3.812 121.776 1.00 92.20 C
ATOM 16 N7 G A 858 -58.152 -4.102 121.021 1.00 92.13 N
ATOM 17 C5 G A 858 -57.610 -4.236 119.747 1.00 91.02 C
ATOM 18 C6 G A 858 -58.255 -4.546 118.524 1.00 90.51 C
ATOM 19 O6 G A 858 -59.477 -4.772 118.359 1.00 90.98 O
ATOM 20 N1 G A 858 -57.328 -4.582 117.473 1.00 89.43 N
ATOM 21 C2 G A 858 -55.969 -4.349 117.609 1.00 88.92 C
ATOM 22 N2 G A 858 -55.218 -4.426 116.491 1.00 87.92 N
ATOM 23 N3 G A 858 -55.369 -4.053 118.753 1.00 89.40 N
ATOM 24 C4 G A 858 -56.254 -4.023 119.762 1.00 90.44 C
ATOM 25 P G A 859 -55.091 1.183 123.240 1.00 80.18 P
ATOM 26 OP1 G A 859 -55.091 1.523 124.695 1.00 81.23 O
ATOM 27 OP2 G A 859 -56.394 0.947 122.558 1.00 80.18 O
ATOM 28 O5' G A 859 -54.258 2.269 122.423 1.00 78.67 O
TER
ATOM 1 O3' C B 925 -48.920 -1.826 118.710 1.00 83.85 O
ATOM 2 P A B 926 -48.785 -3.416 118.847 1.00 89.01 P
ATOM 3 OP1 A B 926 -47.807 -3.698 119.934 1.00 89.81 O
ATOM 4 OP2 A B 926 -48.529 -3.964 117.487 1.00 88.28 O
ATOM 5 O5' A B 926 -50.230 -3.811 119.314 1.00 89.94 O
ATOM 6 C5' A B 926 -50.526 -5.139 119.614 1.00 91.09 C
ATOM 7 C4' A B 926 -50.803 -5.317 121.067 1.00 92.42 C
ATOM 8 O4' A B 926 -52.234 -5.374 121.230 1.00 92.95 O
ATOM 9 C3' A B 926 -50.282 -6.620 121.611 1.00 93.59 C
ATOM 10 O3' A B 926 -50.142 -6.536 123.021 1.00 94.67 O
ATOM 11 C2' A B 926 -51.395 -7.585 121.231 1.00 94.21 C
ATOM 12 O2' A B 926 -51.470 -8.769 122.003 1.00 95.68 O
ATOM 13 C1' A B 926 -52.649 -6.720 121.377 1.00 94.07 C
ATOM 14 N9 A B 926 -53.631 -7.003 120.340 1.00 93.70 N
ATOM 15 C8 A B 926 -53.354 -7.233 119.022 1.00 92.75 C
ATOM 16 N7 A B 926 -54.401 -7.508 118.300 1.00 92.69 N
ATOM 17 C5 A B 926 -55.426 -7.472 119.224 1.00 93.68 C
ATOM 18 C6 A B 926 -56.798 -7.683 119.093 1.00 94.17 C
ATOM 19 N6 A B 926 -57.410 -7.979 117.940 1.00 93.70 N
ATOM 20 N1 A B 926 -57.521 -7.575 120.219 1.00 95.21 N
ATOM 21 C2 A B 926 -56.913 -7.281 121.372 1.00 95.73 C
ATOM 22 N3 A B 926 -55.634 -7.054 121.628 1.00 95.37 N
ATOM 23 C4 A B 926 -54.958 -7.175 120.488 1.00 94.33 C
ATOM 24 P U B 927 -48.738 -6.916 123.687 1.00 92.62 P
ATOM 25 OP1 U B 927 -47.999 -5.640 123.921 1.00 91.82 O
ATOM 26 OP2 U B 927 -48.120 -7.955 122.821 1.00 92.48 O
ATOM 27 O5' U B 927 -49.169 -7.563 125.075 1.00 94.36 O
TER
ATOM 2 P G A 858 -57.600 -2.008 125.917 1.00 94.78 P
ATOM 3 OP1 G A 858 -58.601 -3.022 126.286 1.00 96.07 O
ATOM 4 OP2 G A 858 -56.840 -1.337 126.998 1.00 95.09 O
ATOM 5 O5' G A 858 -56.594 -2.604 124.842 1.00 93.85 O
ATOM 6 C5' G A 858 -55.193 -2.513 125.044 1.00 93.52 C
ATOM 7 C4' G A 858 -54.435 -2.494 123.743 1.00 92.15 C
ATOM 8 O4' G A 858 -54.691 -3.713 123.009 1.00 92.36 O
ATOM 9 C3' G A 858 -54.795 -1.392 122.756 1.00 90.79 C
ATOM 10 O3' G A 858 -54.195 -0.151 123.072 1.00 90.15 O
ATOM 11 C2' G A 858 -54.298 -1.973 121.445 1.00 89.91 C
ATOM 12 O2' G A 858 -52.883 -1.865 121.360 1.00 89.36 O
ATOM 13 C1' G A 858 -54.655 -3.446 121.624 1.00 91.05 C
ATOM 14 N9 G A 858 -55.971 -3.756 121.067 1.00 91.21 N
ATOM 15 C8 G A 858 -57.135 -3.812 121.776 1.00 92.20 C
ATOM 16 N7 G A 858 -58.152 -4.102 121.021 1.00 92.13 N
ATOM 17 C5 G A 858 -57.610 -4.236 119.747 1.00 91.02 C
ATOM 18 C6 G A 858 -58.255 -4.546 118.524 1.00 90.51 C
ATOM 19 O6 G A 858 -59.477 -4.772 118.359 1.00 90.98 O
ATOM 20 N1 G A 858 -57.328 -4.582 117.473 1.00 89.43 N
ATOM 21 C2 G A 858 -55.969 -4.349 117.609 1.00 88.92 C
ATOM 22 N2 G A 858 -55.218 -4.426 116.491 1.00 87.92 N
ATOM 23 N3 G A 858 -55.369 -4.053 118.753 1.00 89.40 N
ATOM 24 C4 G A 858 -56.254 -4.023 119.762 1.00 90.44 C
ATOM 25 P G A 859 -55.091 1.183 123.240 1.00 80.18 P
ATOM 26 OP1 G A 859 -55.091 1.523 124.695 1.00 81.23 O
ATOM 27 OP2 G A 859 -56.394 0.947 122.558 1.00 80.18 O
ATOM 28 O5' G A 859 -54.258 2.269 122.423 1.00 78.67 O
TER
ATOM 1 O3' C B 925 -48.920 -1.826 118.710 1.00 83.85 O
ATOM 2 P A B 926 -48.785 -3.416 118.847 1.00 89.01 P
ATOM 3 OP1 A B 926 -47.807 -3.698 119.934 1.00 89.81 O
ATOM 4 OP2 A B 926 -48.529 -3.964 117.487 1.00 88.28 O
ATOM 5 O5' A B 926 -50.230 -3.811 119.314 1.00 89.94 O
ATOM 6 C5' A B 926 -50.526 -5.139 119.614 1.00 91.09 C
ATOM 7 C4' A B 926 -50.803 -5.317 121.067 1.00 92.42 C
ATOM 8 O4' A B 926 -52.234 -5.374 121.230 1.00 92.95 O
ATOM 9 C3' A B 926 -50.282 -6.620 121.611 1.00 93.59 C
ATOM 10 O3' A B 926 -50.142 -6.536 123.021 1.00 94.67 O
ATOM 11 C2' A B 926 -51.395 -7.585 121.231 1.00 94.21 C
ATOM 12 O2' A B 926 -51.470 -8.769 122.003 1.00 95.68 O
ATOM 13 C1' A B 926 -52.649 -6.720 121.377 1.00 94.07 C
ATOM 14 N9 A B 926 -53.631 -7.003 120.340 1.00 93.70 N
ATOM 15 C8 A B 926 -53.354 -7.233 119.022 1.00 92.75 C
ATOM 16 N7 A B 926 -54.401 -7.508 118.300 1.00 92.69 N
ATOM 17 C5 A B 926 -55.426 -7.472 119.224 1.00 93.68 C
ATOM 18 C6 A B 926 -56.798 -7.683 119.093 1.00 94.17 C
ATOM 19 N6 A B 926 -57.410 -7.979 117.940 1.00 93.70 N
ATOM 20 N1 A B 926 -57.521 -7.575 120.219 1.00 95.21 N
ATOM 21 C2 A B 926 -56.913 -7.281 121.372 1.00 95.73 C
ATOM 22 N3 A B 926 -55.634 -7.054 121.628 1.00 95.37 N
ATOM 23 C4 A B 926 -54.958 -7.175 120.488 1.00 94.33 C
ATOM 24 P U B 927 -48.738 -6.916 123.687 1.00 92.62 P
ATOM 25 OP1 U B 927 -47.999 -5.640 123.921 1.00 91.82 O
ATOM 26 OP2 U B 927 -48.120 -7.955 122.821 1.00 92.48 O
ATOM 27 O5' U B 927 -49.169 -7.563 125.075 1.00 94.36 O
TER
Atoms:
OP1: (-58.601,-3.022,126.286)
OP2: (-56.840,-1.337,126.998)
C3': (-54.795,-1.392,122.756)
C1': (-54.655,-3.446,121.624)
C5': (-55.193,-2.513,125.044)
O6: (-59.477,-4.772,118.359)
O4': (-54.691,-3.713,123.009)
C8: (-57.135,-3.812,121.776)
C2: (-55.969,-4.349,117.609)
C6: (-58.255,-4.546,118.524)
C5: (-57.610,-4.236,119.747)
C4: (-56.254,-4.023,119.762)
P: (-57.600,-2.008,125.917)
C4': (-54.435,-2.494,123.743)
C2': (-54.298,-1.973,121.445)
O2': (-52.883,-1.865,121.360)
N1: (-57.328,-4.582,117.473)
N2: (-55.218,-4.426,116.491)
N3: (-55.369,-4.053,118.753)
N7: (-58.152,-4.102,121.021)
N9: (-55.971,-3.756,121.067)
O5': (-56.594,-2.604,124.842)
O3': (-54.195,-0.151,123.072)
OP2: (-56.840,-1.337,126.998)
C3': (-54.795,-1.392,122.756)
C1': (-54.655,-3.446,121.624)
C5': (-55.193,-2.513,125.044)
O6: (-59.477,-4.772,118.359)
O4': (-54.691,-3.713,123.009)
C8: (-57.135,-3.812,121.776)
C2: (-55.969,-4.349,117.609)
C6: (-58.255,-4.546,118.524)
C5: (-57.610,-4.236,119.747)
C4: (-56.254,-4.023,119.762)
P: (-57.600,-2.008,125.917)
C4': (-54.435,-2.494,123.743)
C2': (-54.298,-1.973,121.445)
O2': (-52.883,-1.865,121.360)
N1: (-57.328,-4.582,117.473)
N2: (-55.218,-4.426,116.491)
N3: (-55.369,-4.053,118.753)
N7: (-58.152,-4.102,121.021)
N9: (-55.971,-3.756,121.067)
O5': (-56.594,-2.604,124.842)
O3': (-54.195,-0.151,123.072)
OP1: (-47.807,-3.698,119.934)
OP2: (-48.529,-3.964,117.487)
C3': (-50.282,-6.620,121.611)
C1': (-52.649,-6.720,121.377)
C5': (-50.526,-5.139,119.614)
O4': (-52.234,-5.374,121.230)
C8: (-53.354,-7.233,119.022)
O2': (-51.470,-8.769,122.003)
C6: (-56.798,-7.683,119.093)
C5: (-55.426,-7.472,119.224)
C4: (-54.958,-7.175,120.488)
P: (-48.785,-3.416,118.847)
C4': (-50.803,-5.317,121.067)
C2': (-51.395,-7.585,121.231)
C2: (-56.913,-7.281,121.372)
N1: (-57.521,-7.575,120.219)
N3: (-55.634,-7.054,121.628)
N6: (-57.410,-7.979,117.940)
N7: (-54.401,-7.508,118.300)
N9: (-53.631,-7.003,120.340)
O5': (-50.230,-3.811,119.314)
O3': (-50.142,-6.536,123.021)
OP2: (-48.529,-3.964,117.487)
C3': (-50.282,-6.620,121.611)
C1': (-52.649,-6.720,121.377)
C5': (-50.526,-5.139,119.614)
O4': (-52.234,-5.374,121.230)
C8: (-53.354,-7.233,119.022)
O2': (-51.470,-8.769,122.003)
C6: (-56.798,-7.683,119.093)
C5: (-55.426,-7.472,119.224)
C4: (-54.958,-7.175,120.488)
P: (-48.785,-3.416,118.847)
C4': (-50.803,-5.317,121.067)
C2': (-51.395,-7.585,121.231)
C2: (-56.913,-7.281,121.372)
N1: (-57.521,-7.575,120.219)
N3: (-55.634,-7.054,121.628)
N6: (-57.410,-7.979,117.940)
N7: (-54.401,-7.508,118.300)
N9: (-53.631,-7.003,120.340)
O5': (-50.230,-3.811,119.314)
O3': (-50.142,-6.536,123.021)
Image (generated by PyMOL):