Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DJ2:A109:A163
Extra
PDB:
ATOM 1 O3' U A 108 14.913 11.359 7.410 1.00 36.67 O
ATOM 2 P G A 109 15.564 10.106 8.173 1.00 38.48 P
ATOM 3 OP1 G A 109 15.614 8.997 7.192 1.00 38.58 O
ATOM 4 OP2 G A 109 14.917 9.907 9.486 1.00 38.25 O
ATOM 5 O5' G A 109 17.044 10.613 8.486 1.00 40.70 O
ATOM 6 C5' G A 109 18.016 10.585 7.461 1.00 43.98 C
ATOM 7 C4' G A 109 19.097 11.612 7.733 1.00 46.49 C
ATOM 8 O4' G A 109 19.734 11.279 8.995 1.00 48.30 O
ATOM 9 C3' G A 109 20.185 11.657 6.662 1.00 46.99 C
ATOM 10 O3' G A 109 19.939 12.729 5.713 1.00 45.81 O
ATOM 11 C2' G A 109 21.481 11.803 7.474 1.00 48.51 C
ATOM 12 O2' G A 109 21.882 13.151 7.672 1.00 49.21 O
ATOM 13 C1' G A 109 21.136 11.170 8.833 1.00 49.81 C
ATOM 14 N9 G A 109 21.530 9.768 9.068 1.00 50.38 N
ATOM 15 C8 G A 109 22.173 9.301 10.194 1.00 50.63 C
ATOM 16 N7 G A 109 22.414 8.018 10.180 1.00 50.63 N
ATOM 17 C5 G A 109 21.893 7.594 8.966 1.00 50.51 C
ATOM 18 C6 G A 109 21.859 6.296 8.395 1.00 50.64 C
ATOM 19 O6 G A 109 22.302 5.243 8.876 1.00 50.75 O
ATOM 20 N1 G A 109 21.239 6.282 7.140 1.00 50.69 N
ATOM 21 C2 G A 109 20.714 7.397 6.518 1.00 50.96 C
ATOM 22 N2 G A 109 20.148 7.220 5.313 1.00 50.70 N
ATOM 23 N3 G A 109 20.744 8.615 7.047 1.00 50.80 N
ATOM 24 C4 G A 109 21.344 8.653 8.268 1.00 50.49 C
ATOM 25 P C A 110 18.824 12.589 4.554 1.00 44.75 P
ATOM 26 OP1 C A 110 17.490 12.794 5.167 1.00 44.48 O
ATOM 27 OP2 C A 110 19.116 11.337 3.816 1.00 44.67 O
ATOM 28 O5' C A 110 19.045 13.836 3.575 1.00 42.04 O
TER
ATOM 1 O3' G B 162 27.451 11.210 14.316 1.00 25.16 O
ATOM 2 P A B 163 26.058 10.797 13.642 1.00 25.20 P
ATOM 3 OP1 A B 163 25.757 11.724 12.535 1.00 24.83 O
ATOM 4 OP2 A B 163 25.082 10.602 14.740 1.00 26.31 O
ATOM 5 O5' A B 163 26.394 9.363 13.026 1.00 27.28 O
ATOM 6 C5' A B 163 26.041 8.132 13.663 1.00 27.52 C
ATOM 7 C4' A B 163 26.195 7.005 12.653 1.00 28.61 C
ATOM 8 O4' A B 163 25.355 7.250 11.489 1.00 29.47 O
ATOM 9 C3' A B 163 27.610 6.846 12.107 1.00 29.02 C
ATOM 10 O3' A B 163 27.920 5.471 11.921 1.00 28.22 O
ATOM 11 C2' A B 163 27.551 7.595 10.778 1.00 29.59 C
ATOM 12 O2' A B 163 28.518 7.182 9.833 1.00 29.73 O
ATOM 13 C1' A B 163 26.146 7.231 10.314 1.00 30.89 C
ATOM 14 N9 A B 163 25.648 8.184 9.323 1.00 31.55 N
ATOM 15 C8 A B 163 25.570 9.544 9.466 1.00 32.09 C
ATOM 16 N7 A B 163 25.098 10.172 8.417 1.00 32.23 N
ATOM 17 C5 A B 163 24.855 9.150 7.514 1.00 32.26 C
ATOM 18 C6 A B 163 24.347 9.156 6.197 1.00 31.96 C
ATOM 19 N6 A B 163 23.991 10.284 5.577 1.00 31.81 N
ATOM 20 N1 A B 163 24.219 7.968 5.553 1.00 31.88 N
ATOM 21 C2 A B 163 24.584 6.845 6.195 1.00 32.46 C
ATOM 22 N3 A B 163 25.077 6.716 7.436 1.00 32.69 N
ATOM 23 C4 A B 163 25.191 7.915 8.051 1.00 32.14 C
ATOM 24 P G B 164 28.846 4.683 12.958 1.00 27.46 P
ATOM 25 OP1 G B 164 29.236 3.404 12.322 1.00 27.86 O
ATOM 26 OP2 G B 164 28.163 4.673 14.269 1.00 27.41 O
ATOM 27 O5' G B 164 30.142 5.610 13.081 1.00 27.33 O
TER
ATOM 2 P G A 109 15.564 10.106 8.173 1.00 38.48 P
ATOM 3 OP1 G A 109 15.614 8.997 7.192 1.00 38.58 O
ATOM 4 OP2 G A 109 14.917 9.907 9.486 1.00 38.25 O
ATOM 5 O5' G A 109 17.044 10.613 8.486 1.00 40.70 O
ATOM 6 C5' G A 109 18.016 10.585 7.461 1.00 43.98 C
ATOM 7 C4' G A 109 19.097 11.612 7.733 1.00 46.49 C
ATOM 8 O4' G A 109 19.734 11.279 8.995 1.00 48.30 O
ATOM 9 C3' G A 109 20.185 11.657 6.662 1.00 46.99 C
ATOM 10 O3' G A 109 19.939 12.729 5.713 1.00 45.81 O
ATOM 11 C2' G A 109 21.481 11.803 7.474 1.00 48.51 C
ATOM 12 O2' G A 109 21.882 13.151 7.672 1.00 49.21 O
ATOM 13 C1' G A 109 21.136 11.170 8.833 1.00 49.81 C
ATOM 14 N9 G A 109 21.530 9.768 9.068 1.00 50.38 N
ATOM 15 C8 G A 109 22.173 9.301 10.194 1.00 50.63 C
ATOM 16 N7 G A 109 22.414 8.018 10.180 1.00 50.63 N
ATOM 17 C5 G A 109 21.893 7.594 8.966 1.00 50.51 C
ATOM 18 C6 G A 109 21.859 6.296 8.395 1.00 50.64 C
ATOM 19 O6 G A 109 22.302 5.243 8.876 1.00 50.75 O
ATOM 20 N1 G A 109 21.239 6.282 7.140 1.00 50.69 N
ATOM 21 C2 G A 109 20.714 7.397 6.518 1.00 50.96 C
ATOM 22 N2 G A 109 20.148 7.220 5.313 1.00 50.70 N
ATOM 23 N3 G A 109 20.744 8.615 7.047 1.00 50.80 N
ATOM 24 C4 G A 109 21.344 8.653 8.268 1.00 50.49 C
ATOM 25 P C A 110 18.824 12.589 4.554 1.00 44.75 P
ATOM 26 OP1 C A 110 17.490 12.794 5.167 1.00 44.48 O
ATOM 27 OP2 C A 110 19.116 11.337 3.816 1.00 44.67 O
ATOM 28 O5' C A 110 19.045 13.836 3.575 1.00 42.04 O
TER
ATOM 1 O3' G B 162 27.451 11.210 14.316 1.00 25.16 O
ATOM 2 P A B 163 26.058 10.797 13.642 1.00 25.20 P
ATOM 3 OP1 A B 163 25.757 11.724 12.535 1.00 24.83 O
ATOM 4 OP2 A B 163 25.082 10.602 14.740 1.00 26.31 O
ATOM 5 O5' A B 163 26.394 9.363 13.026 1.00 27.28 O
ATOM 6 C5' A B 163 26.041 8.132 13.663 1.00 27.52 C
ATOM 7 C4' A B 163 26.195 7.005 12.653 1.00 28.61 C
ATOM 8 O4' A B 163 25.355 7.250 11.489 1.00 29.47 O
ATOM 9 C3' A B 163 27.610 6.846 12.107 1.00 29.02 C
ATOM 10 O3' A B 163 27.920 5.471 11.921 1.00 28.22 O
ATOM 11 C2' A B 163 27.551 7.595 10.778 1.00 29.59 C
ATOM 12 O2' A B 163 28.518 7.182 9.833 1.00 29.73 O
ATOM 13 C1' A B 163 26.146 7.231 10.314 1.00 30.89 C
ATOM 14 N9 A B 163 25.648 8.184 9.323 1.00 31.55 N
ATOM 15 C8 A B 163 25.570 9.544 9.466 1.00 32.09 C
ATOM 16 N7 A B 163 25.098 10.172 8.417 1.00 32.23 N
ATOM 17 C5 A B 163 24.855 9.150 7.514 1.00 32.26 C
ATOM 18 C6 A B 163 24.347 9.156 6.197 1.00 31.96 C
ATOM 19 N6 A B 163 23.991 10.284 5.577 1.00 31.81 N
ATOM 20 N1 A B 163 24.219 7.968 5.553 1.00 31.88 N
ATOM 21 C2 A B 163 24.584 6.845 6.195 1.00 32.46 C
ATOM 22 N3 A B 163 25.077 6.716 7.436 1.00 32.69 N
ATOM 23 C4 A B 163 25.191 7.915 8.051 1.00 32.14 C
ATOM 24 P G B 164 28.846 4.683 12.958 1.00 27.46 P
ATOM 25 OP1 G B 164 29.236 3.404 12.322 1.00 27.86 O
ATOM 26 OP2 G B 164 28.163 4.673 14.269 1.00 27.41 O
ATOM 27 O5' G B 164 30.142 5.610 13.081 1.00 27.33 O
TER
Atoms:
OP1: (15.614,8.997,7.192)
OP2: (14.917,9.907,9.486)
C3': (20.185,11.657,6.662)
C1': (21.136,11.170,8.833)
C5': (18.016,10.585,7.461)
O6: (22.302,5.243,8.876)
O4': (19.734,11.279,8.995)
C8: (22.173,9.301,10.194)
C2: (20.714,7.397,6.518)
C6: (21.859,6.296,8.395)
C5: (21.893,7.594,8.966)
C4: (21.344,8.653,8.268)
P: (15.564,10.106,8.173)
C4': (19.097,11.612,7.733)
C2': (21.481,11.803,7.474)
O2': (21.882,13.151,7.672)
N1: (21.239,6.282,7.140)
N2: (20.148,7.220,5.313)
N3: (20.744,8.615,7.047)
N7: (22.414,8.018,10.180)
N9: (21.530,9.768,9.068)
O5': (17.044,10.613,8.486)
O3': (19.939,12.729,5.713)
OP2: (14.917,9.907,9.486)
C3': (20.185,11.657,6.662)
C1': (21.136,11.170,8.833)
C5': (18.016,10.585,7.461)
O6: (22.302,5.243,8.876)
O4': (19.734,11.279,8.995)
C8: (22.173,9.301,10.194)
C2: (20.714,7.397,6.518)
C6: (21.859,6.296,8.395)
C5: (21.893,7.594,8.966)
C4: (21.344,8.653,8.268)
P: (15.564,10.106,8.173)
C4': (19.097,11.612,7.733)
C2': (21.481,11.803,7.474)
O2': (21.882,13.151,7.672)
N1: (21.239,6.282,7.140)
N2: (20.148,7.220,5.313)
N3: (20.744,8.615,7.047)
N7: (22.414,8.018,10.180)
N9: (21.530,9.768,9.068)
O5': (17.044,10.613,8.486)
O3': (19.939,12.729,5.713)
OP1: (25.757,11.724,12.535)
OP2: (25.082,10.602,14.740)
C3': (27.610,6.846,12.107)
C1': (26.146,7.231,10.314)
C5': (26.041,8.132,13.663)
O4': (25.355,7.250,11.489)
C8: (25.570,9.544,9.466)
O2': (28.518,7.182,9.833)
C6: (24.347,9.156,6.197)
C5: (24.855,9.150,7.514)
C4: (25.191,7.915,8.051)
P: (26.058,10.797,13.642)
C4': (26.195,7.005,12.653)
C2': (27.551,7.595,10.778)
C2: (24.584,6.845,6.195)
N1: (24.219,7.968,5.553)
N3: (25.077,6.716,7.436)
N6: (23.991,10.284,5.577)
N7: (25.098,10.172,8.417)
N9: (25.648,8.184,9.323)
O5': (26.394,9.363,13.026)
O3': (27.920,5.471,11.921)
OP2: (25.082,10.602,14.740)
C3': (27.610,6.846,12.107)
C1': (26.146,7.231,10.314)
C5': (26.041,8.132,13.663)
O4': (25.355,7.250,11.489)
C8: (25.570,9.544,9.466)
O2': (28.518,7.182,9.833)
C6: (24.347,9.156,6.197)
C5: (24.855,9.150,7.514)
C4: (25.191,7.915,8.051)
P: (26.058,10.797,13.642)
C4': (26.195,7.005,12.653)
C2': (27.551,7.595,10.778)
C2: (24.584,6.845,6.195)
N1: (24.219,7.968,5.553)
N3: (25.077,6.716,7.436)
N6: (23.991,10.284,5.577)
N7: (25.098,10.172,8.417)
N9: (25.648,8.184,9.323)
O5': (26.394,9.363,13.026)
O3': (27.920,5.471,11.921)
Image (generated by PyMOL):