Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:056:057
Extra
PDB:
ATOM 1 O3' C A 55 56.003 154.920 29.251 1.00 47.84 O
ATOM 2 P G A 56 57.554 154.701 28.910 1.00 49.87 P
ATOM 3 OP1 G A 56 57.680 154.679 27.429 1.00 50.15 O
ATOM 4 OP2 G A 56 58.021 153.538 29.702 1.00 48.79 O
ATOM 5 O5' G A 56 58.286 156.000 29.478 1.00 47.52 O
ATOM 6 C5' G A 56 57.920 157.321 29.029 1.00 45.56 C
ATOM 7 C4' G A 56 58.854 158.359 29.616 1.00 43.98 C
ATOM 8 O4' G A 56 58.852 158.245 31.064 1.00 44.42 O
ATOM 9 C3' G A 56 60.315 158.273 29.201 1.00 43.66 C
ATOM 10 O3' G A 56 60.862 159.587 29.273 1.00 45.30 O
ATOM 11 C2' G A 56 60.922 157.430 30.317 1.00 42.87 C
ATOM 12 O2' G A 56 62.311 157.643 30.471 1.00 40.80 O
ATOM 13 C1' G A 56 60.159 157.960 31.529 1.00 42.19 C
ATOM 14 N9 G A 56 60.042 157.034 32.652 1.00 41.62 N
ATOM 15 C8 G A 56 59.234 155.926 32.723 1.00 41.82 C
ATOM 16 N7 G A 56 59.290 155.322 33.878 1.00 42.24 N
ATOM 17 C5 G A 56 60.201 156.067 34.613 1.00 41.30 C
ATOM 18 C6 G A 56 60.656 155.904 35.948 1.00 40.40 C
ATOM 19 O6 G A 56 60.332 155.044 36.775 1.00 38.13 O
ATOM 20 N1 G A 56 61.578 156.882 36.293 1.00 40.00 N
ATOM 21 C2 G A 56 62.009 157.886 35.469 1.00 39.93 C
ATOM 22 N2 G A 56 62.914 158.718 35.985 1.00 40.58 N
ATOM 23 N3 G A 56 61.589 158.058 34.230 1.00 41.64 N
ATOM 24 C4 G A 56 60.689 157.118 33.868 1.00 41.91 C
ATOM 25 P A A 57 60.775 160.573 28.007 1.00 45.01 P
ATOM 26 OP1 A A 57 59.875 159.977 26.984 1.00 45.84 O
ATOM 27 OP2 A A 57 62.157 160.945 27.642 1.00 42.55 O
ATOM 28 O5' A A 57 60.042 161.864 28.578 1.00 44.53 O
TER
ATOM 1 O3' G B 56 60.862 159.587 29.273 1.00 45.30 O
ATOM 2 P A B 57 60.775 160.573 28.007 1.00 45.01 P
ATOM 3 OP1 A B 57 59.875 159.977 26.984 1.00 45.84 O
ATOM 4 OP2 A B 57 62.157 160.945 27.642 1.00 42.55 O
ATOM 5 O5' A B 57 60.042 161.864 28.578 1.00 44.53 O
ATOM 6 C5' A B 57 60.439 162.440 29.829 1.00 46.34 C
ATOM 7 C4' A B 57 60.912 163.858 29.621 1.00 48.05 C
ATOM 8 O4' A B 57 61.388 164.385 30.890 1.00 48.71 O
ATOM 9 C3' A B 57 62.084 163.997 28.656 1.00 48.55 C
ATOM 10 O3' A B 57 62.042 165.295 28.056 1.00 47.51 O
ATOM 11 C2' A B 57 63.280 163.888 29.594 1.00 49.26 C
ATOM 12 O2' A B 57 64.468 164.435 29.061 1.00 51.34 O
ATOM 13 C1' A B 57 62.769 164.680 30.797 1.00 49.80 C
ATOM 14 N9 A B 57 63.393 164.341 32.077 1.00 51.81 N
ATOM 15 C8 A B 57 64.039 165.193 32.937 1.00 52.81 C
ATOM 16 N7 A B 57 64.486 164.613 34.022 1.00 53.53 N
ATOM 17 C5 A B 57 64.114 163.286 33.864 1.00 53.59 C
ATOM 18 C6 A B 57 64.300 162.156 34.667 1.00 54.13 C
ATOM 19 N6 A B 57 64.934 162.179 35.840 1.00 54.44 N
ATOM 20 N1 A B 57 63.808 160.983 34.219 1.00 55.38 N
ATOM 21 C2 A B 57 63.177 160.959 33.040 1.00 53.70 C
ATOM 22 N3 A B 57 62.941 161.951 32.196 1.00 53.00 N
ATOM 23 C4 A B 57 63.441 163.104 32.671 1.00 52.94 C
ATOM 24 P U B 58 62.003 165.443 26.459 1.00 45.56 P
ATOM 25 OP1 U B 58 62.953 164.464 25.863 1.00 44.59 O
ATOM 26 OP2 U B 58 62.164 166.884 26.169 1.00 45.21 O
ATOM 27 O5' U B 58 60.507 165.046 26.085 1.00 43.99 O
TER
ATOM 2 P G A 56 57.554 154.701 28.910 1.00 49.87 P
ATOM 3 OP1 G A 56 57.680 154.679 27.429 1.00 50.15 O
ATOM 4 OP2 G A 56 58.021 153.538 29.702 1.00 48.79 O
ATOM 5 O5' G A 56 58.286 156.000 29.478 1.00 47.52 O
ATOM 6 C5' G A 56 57.920 157.321 29.029 1.00 45.56 C
ATOM 7 C4' G A 56 58.854 158.359 29.616 1.00 43.98 C
ATOM 8 O4' G A 56 58.852 158.245 31.064 1.00 44.42 O
ATOM 9 C3' G A 56 60.315 158.273 29.201 1.00 43.66 C
ATOM 10 O3' G A 56 60.862 159.587 29.273 1.00 45.30 O
ATOM 11 C2' G A 56 60.922 157.430 30.317 1.00 42.87 C
ATOM 12 O2' G A 56 62.311 157.643 30.471 1.00 40.80 O
ATOM 13 C1' G A 56 60.159 157.960 31.529 1.00 42.19 C
ATOM 14 N9 G A 56 60.042 157.034 32.652 1.00 41.62 N
ATOM 15 C8 G A 56 59.234 155.926 32.723 1.00 41.82 C
ATOM 16 N7 G A 56 59.290 155.322 33.878 1.00 42.24 N
ATOM 17 C5 G A 56 60.201 156.067 34.613 1.00 41.30 C
ATOM 18 C6 G A 56 60.656 155.904 35.948 1.00 40.40 C
ATOM 19 O6 G A 56 60.332 155.044 36.775 1.00 38.13 O
ATOM 20 N1 G A 56 61.578 156.882 36.293 1.00 40.00 N
ATOM 21 C2 G A 56 62.009 157.886 35.469 1.00 39.93 C
ATOM 22 N2 G A 56 62.914 158.718 35.985 1.00 40.58 N
ATOM 23 N3 G A 56 61.589 158.058 34.230 1.00 41.64 N
ATOM 24 C4 G A 56 60.689 157.118 33.868 1.00 41.91 C
ATOM 25 P A A 57 60.775 160.573 28.007 1.00 45.01 P
ATOM 26 OP1 A A 57 59.875 159.977 26.984 1.00 45.84 O
ATOM 27 OP2 A A 57 62.157 160.945 27.642 1.00 42.55 O
ATOM 28 O5' A A 57 60.042 161.864 28.578 1.00 44.53 O
TER
ATOM 1 O3' G B 56 60.862 159.587 29.273 1.00 45.30 O
ATOM 2 P A B 57 60.775 160.573 28.007 1.00 45.01 P
ATOM 3 OP1 A B 57 59.875 159.977 26.984 1.00 45.84 O
ATOM 4 OP2 A B 57 62.157 160.945 27.642 1.00 42.55 O
ATOM 5 O5' A B 57 60.042 161.864 28.578 1.00 44.53 O
ATOM 6 C5' A B 57 60.439 162.440 29.829 1.00 46.34 C
ATOM 7 C4' A B 57 60.912 163.858 29.621 1.00 48.05 C
ATOM 8 O4' A B 57 61.388 164.385 30.890 1.00 48.71 O
ATOM 9 C3' A B 57 62.084 163.997 28.656 1.00 48.55 C
ATOM 10 O3' A B 57 62.042 165.295 28.056 1.00 47.51 O
ATOM 11 C2' A B 57 63.280 163.888 29.594 1.00 49.26 C
ATOM 12 O2' A B 57 64.468 164.435 29.061 1.00 51.34 O
ATOM 13 C1' A B 57 62.769 164.680 30.797 1.00 49.80 C
ATOM 14 N9 A B 57 63.393 164.341 32.077 1.00 51.81 N
ATOM 15 C8 A B 57 64.039 165.193 32.937 1.00 52.81 C
ATOM 16 N7 A B 57 64.486 164.613 34.022 1.00 53.53 N
ATOM 17 C5 A B 57 64.114 163.286 33.864 1.00 53.59 C
ATOM 18 C6 A B 57 64.300 162.156 34.667 1.00 54.13 C
ATOM 19 N6 A B 57 64.934 162.179 35.840 1.00 54.44 N
ATOM 20 N1 A B 57 63.808 160.983 34.219 1.00 55.38 N
ATOM 21 C2 A B 57 63.177 160.959 33.040 1.00 53.70 C
ATOM 22 N3 A B 57 62.941 161.951 32.196 1.00 53.00 N
ATOM 23 C4 A B 57 63.441 163.104 32.671 1.00 52.94 C
ATOM 24 P U B 58 62.003 165.443 26.459 1.00 45.56 P
ATOM 25 OP1 U B 58 62.953 164.464 25.863 1.00 44.59 O
ATOM 26 OP2 U B 58 62.164 166.884 26.169 1.00 45.21 O
ATOM 27 O5' U B 58 60.507 165.046 26.085 1.00 43.99 O
TER
Atoms:
OP1: (57.680,154.679,27.429)
OP2: (58.021,153.538,29.702)
C3': (60.315,158.273,29.201)
C1': (60.159,157.960,31.529)
C5': (57.920,157.321,29.029)
O6: (60.332,155.044,36.775)
O4': (58.852,158.245,31.064)
C8: (59.234,155.926,32.723)
C2: (62.009,157.886,35.469)
C6: (60.656,155.904,35.948)
C5: (60.201,156.067,34.613)
C4: (60.689,157.118,33.868)
P: (57.554,154.701,28.910)
C4': (58.854,158.359,29.616)
C2': (60.922,157.430,30.317)
O2': (62.311,157.643,30.471)
N1: (61.578,156.882,36.293)
N2: (62.914,158.718,35.985)
N3: (61.589,158.058,34.230)
N7: (59.290,155.322,33.878)
N9: (60.042,157.034,32.652)
O5': (58.286,156.000,29.478)
O3': (60.862,159.587,29.273)
OP2: (58.021,153.538,29.702)
C3': (60.315,158.273,29.201)
C1': (60.159,157.960,31.529)
C5': (57.920,157.321,29.029)
O6: (60.332,155.044,36.775)
O4': (58.852,158.245,31.064)
C8: (59.234,155.926,32.723)
C2: (62.009,157.886,35.469)
C6: (60.656,155.904,35.948)
C5: (60.201,156.067,34.613)
C4: (60.689,157.118,33.868)
P: (57.554,154.701,28.910)
C4': (58.854,158.359,29.616)
C2': (60.922,157.430,30.317)
O2': (62.311,157.643,30.471)
N1: (61.578,156.882,36.293)
N2: (62.914,158.718,35.985)
N3: (61.589,158.058,34.230)
N7: (59.290,155.322,33.878)
N9: (60.042,157.034,32.652)
O5': (58.286,156.000,29.478)
O3': (60.862,159.587,29.273)
OP1: (59.875,159.977,26.984)
OP2: (62.157,160.945,27.642)
C3': (62.084,163.997,28.656)
C1': (62.769,164.680,30.797)
C5': (60.439,162.440,29.829)
O4': (61.388,164.385,30.890)
C8: (64.039,165.193,32.937)
O2': (64.468,164.435,29.061)
C6: (64.300,162.156,34.667)
C5: (64.114,163.286,33.864)
C4: (63.441,163.104,32.671)
P: (60.775,160.573,28.007)
C4': (60.912,163.858,29.621)
C2': (63.280,163.888,29.594)
C2: (63.177,160.959,33.040)
N1: (63.808,160.983,34.219)
N3: (62.941,161.951,32.196)
N6: (64.934,162.179,35.840)
N7: (64.486,164.613,34.022)
N9: (63.393,164.341,32.077)
O5': (60.042,161.864,28.578)
O3': (62.042,165.295,28.056)
OP2: (62.157,160.945,27.642)
C3': (62.084,163.997,28.656)
C1': (62.769,164.680,30.797)
C5': (60.439,162.440,29.829)
O4': (61.388,164.385,30.890)
C8: (64.039,165.193,32.937)
O2': (64.468,164.435,29.061)
C6: (64.300,162.156,34.667)
C5: (64.114,163.286,33.864)
C4: (63.441,163.104,32.671)
P: (60.775,160.573,28.007)
C4': (60.912,163.858,29.621)
C2': (63.280,163.888,29.594)
C2: (63.177,160.959,33.040)
N1: (63.808,160.983,34.219)
N3: (62.941,161.951,32.196)
N6: (64.934,162.179,35.840)
N7: (64.486,164.613,34.022)
N9: (63.393,164.341,32.077)
O5': (60.042,161.864,28.578)
O3': (62.042,165.295,28.056)
Image (generated by PyMOL):