Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:034:035
Extra
PDB:
ATOM 1 O3' U A 33 64.510 139.656 25.251 1.00 51.33 O
ATOM 2 P G A 34 65.671 140.185 24.281 1.00 51.38 P
ATOM 3 OP1 G A 34 65.182 141.505 23.798 1.00 50.86 O
ATOM 4 OP2 G A 34 66.037 139.129 23.307 1.00 50.12 O
ATOM 5 O5' G A 34 66.921 140.388 25.250 1.00 52.43 O
ATOM 6 C5' G A 34 66.983 141.508 26.156 1.00 52.68 C
ATOM 7 C4' G A 34 68.355 141.607 26.777 1.00 52.72 C
ATOM 8 O4' G A 34 68.561 140.519 27.719 1.00 54.44 O
ATOM 9 C3' G A 34 69.530 141.482 25.826 1.00 53.02 C
ATOM 10 O3' G A 34 69.758 142.691 25.103 1.00 54.69 O
ATOM 11 C2' G A 34 70.658 141.121 26.788 1.00 52.61 C
ATOM 12 O2' G A 34 71.115 142.230 27.533 1.00 52.23 O
ATOM 13 C1' G A 34 69.940 140.166 27.745 1.00 52.75 C
ATOM 14 N9 G A 34 70.075 138.767 27.343 1.00 51.07 N
ATOM 15 C8 G A 34 69.132 137.997 26.701 1.00 50.84 C
ATOM 16 N7 G A 34 69.561 136.799 26.409 1.00 50.35 N
ATOM 17 C5 G A 34 70.860 136.769 26.893 1.00 49.32 C
ATOM 18 C6 G A 34 71.839 135.740 26.827 1.00 50.73 C
ATOM 19 O6 G A 34 71.754 134.622 26.289 1.00 50.96 O
ATOM 20 N1 G A 34 73.023 136.121 27.454 1.00 49.96 N
ATOM 21 C2 G A 34 73.240 137.336 28.052 1.00 49.19 C
ATOM 22 N2 G A 34 74.443 137.494 28.614 1.00 49.13 N
ATOM 23 N3 G A 34 72.344 138.316 28.097 1.00 48.33 N
ATOM 24 C4 G A 34 71.185 137.965 27.500 1.00 49.37 C
ATOM 25 P A A 35 70.438 142.646 23.634 1.00 54.97 P
ATOM 26 OP1 A A 35 69.399 142.910 22.605 1.00 53.99 O
ATOM 27 OP2 A A 35 71.281 141.424 23.520 1.00 55.70 O
ATOM 28 O5' A A 35 71.444 143.879 23.677 1.00 54.58 O
TER
ATOM 1 O3' G B 34 69.758 142.691 25.103 1.00 54.69 O
ATOM 2 P A B 35 70.438 142.646 23.634 1.00 54.97 P
ATOM 3 OP1 A B 35 69.399 142.910 22.605 1.00 53.99 O
ATOM 4 OP2 A B 35 71.281 141.424 23.520 1.00 55.70 O
ATOM 5 O5' A B 35 71.444 143.879 23.677 1.00 54.58 O
ATOM 6 C5' A B 35 72.374 144.001 24.765 1.00 54.33 C
ATOM 7 C4' A B 35 73.498 144.929 24.398 1.00 53.56 C
ATOM 8 O4' A B 35 74.399 145.019 25.532 1.00 53.71 O
ATOM 9 C3' A B 35 74.354 144.480 23.224 1.00 53.56 C
ATOM 10 O3' A B 35 74.878 145.642 22.604 1.00 57.56 O
ATOM 11 C2' A B 35 75.477 143.708 23.904 1.00 52.20 C
ATOM 12 O2' A B 35 76.668 143.644 23.145 1.00 45.68 O
ATOM 13 C1' A B 35 75.680 144.543 25.165 1.00 53.23 C
ATOM 14 N9 A B 35 76.235 143.807 26.302 1.00 54.17 N
ATOM 15 C8 A B 35 77.329 144.163 27.043 1.00 53.60 C
ATOM 16 N7 A B 35 77.593 143.339 28.023 1.00 54.66 N
ATOM 17 C5 A B 35 76.611 142.370 27.920 1.00 54.49 C
ATOM 18 C6 A B 35 76.343 141.225 28.673 1.00 55.34 C
ATOM 19 N6 A B 35 77.071 140.856 29.730 1.00 54.19 N
ATOM 20 N1 A B 35 75.289 140.462 28.306 1.00 55.42 N
ATOM 21 C2 A B 35 74.560 140.842 27.251 1.00 54.24 C
ATOM 22 N3 A B 35 74.711 141.903 26.466 1.00 54.93 N
ATOM 23 C4 A B 35 75.769 142.638 26.859 1.00 54.91 C
ATOM 24 P U B 36 74.639 145.888 21.041 1.00 58.24 P
ATOM 25 OP1 U B 36 74.687 144.572 20.365 1.00 58.01 O
ATOM 26 OP2 U B 36 75.575 146.960 20.643 1.00 56.67 O
ATOM 27 O5' U B 36 73.147 146.424 20.945 1.00 59.05 O
TER
ATOM 2 P G A 34 65.671 140.185 24.281 1.00 51.38 P
ATOM 3 OP1 G A 34 65.182 141.505 23.798 1.00 50.86 O
ATOM 4 OP2 G A 34 66.037 139.129 23.307 1.00 50.12 O
ATOM 5 O5' G A 34 66.921 140.388 25.250 1.00 52.43 O
ATOM 6 C5' G A 34 66.983 141.508 26.156 1.00 52.68 C
ATOM 7 C4' G A 34 68.355 141.607 26.777 1.00 52.72 C
ATOM 8 O4' G A 34 68.561 140.519 27.719 1.00 54.44 O
ATOM 9 C3' G A 34 69.530 141.482 25.826 1.00 53.02 C
ATOM 10 O3' G A 34 69.758 142.691 25.103 1.00 54.69 O
ATOM 11 C2' G A 34 70.658 141.121 26.788 1.00 52.61 C
ATOM 12 O2' G A 34 71.115 142.230 27.533 1.00 52.23 O
ATOM 13 C1' G A 34 69.940 140.166 27.745 1.00 52.75 C
ATOM 14 N9 G A 34 70.075 138.767 27.343 1.00 51.07 N
ATOM 15 C8 G A 34 69.132 137.997 26.701 1.00 50.84 C
ATOM 16 N7 G A 34 69.561 136.799 26.409 1.00 50.35 N
ATOM 17 C5 G A 34 70.860 136.769 26.893 1.00 49.32 C
ATOM 18 C6 G A 34 71.839 135.740 26.827 1.00 50.73 C
ATOM 19 O6 G A 34 71.754 134.622 26.289 1.00 50.96 O
ATOM 20 N1 G A 34 73.023 136.121 27.454 1.00 49.96 N
ATOM 21 C2 G A 34 73.240 137.336 28.052 1.00 49.19 C
ATOM 22 N2 G A 34 74.443 137.494 28.614 1.00 49.13 N
ATOM 23 N3 G A 34 72.344 138.316 28.097 1.00 48.33 N
ATOM 24 C4 G A 34 71.185 137.965 27.500 1.00 49.37 C
ATOM 25 P A A 35 70.438 142.646 23.634 1.00 54.97 P
ATOM 26 OP1 A A 35 69.399 142.910 22.605 1.00 53.99 O
ATOM 27 OP2 A A 35 71.281 141.424 23.520 1.00 55.70 O
ATOM 28 O5' A A 35 71.444 143.879 23.677 1.00 54.58 O
TER
ATOM 1 O3' G B 34 69.758 142.691 25.103 1.00 54.69 O
ATOM 2 P A B 35 70.438 142.646 23.634 1.00 54.97 P
ATOM 3 OP1 A B 35 69.399 142.910 22.605 1.00 53.99 O
ATOM 4 OP2 A B 35 71.281 141.424 23.520 1.00 55.70 O
ATOM 5 O5' A B 35 71.444 143.879 23.677 1.00 54.58 O
ATOM 6 C5' A B 35 72.374 144.001 24.765 1.00 54.33 C
ATOM 7 C4' A B 35 73.498 144.929 24.398 1.00 53.56 C
ATOM 8 O4' A B 35 74.399 145.019 25.532 1.00 53.71 O
ATOM 9 C3' A B 35 74.354 144.480 23.224 1.00 53.56 C
ATOM 10 O3' A B 35 74.878 145.642 22.604 1.00 57.56 O
ATOM 11 C2' A B 35 75.477 143.708 23.904 1.00 52.20 C
ATOM 12 O2' A B 35 76.668 143.644 23.145 1.00 45.68 O
ATOM 13 C1' A B 35 75.680 144.543 25.165 1.00 53.23 C
ATOM 14 N9 A B 35 76.235 143.807 26.302 1.00 54.17 N
ATOM 15 C8 A B 35 77.329 144.163 27.043 1.00 53.60 C
ATOM 16 N7 A B 35 77.593 143.339 28.023 1.00 54.66 N
ATOM 17 C5 A B 35 76.611 142.370 27.920 1.00 54.49 C
ATOM 18 C6 A B 35 76.343 141.225 28.673 1.00 55.34 C
ATOM 19 N6 A B 35 77.071 140.856 29.730 1.00 54.19 N
ATOM 20 N1 A B 35 75.289 140.462 28.306 1.00 55.42 N
ATOM 21 C2 A B 35 74.560 140.842 27.251 1.00 54.24 C
ATOM 22 N3 A B 35 74.711 141.903 26.466 1.00 54.93 N
ATOM 23 C4 A B 35 75.769 142.638 26.859 1.00 54.91 C
ATOM 24 P U B 36 74.639 145.888 21.041 1.00 58.24 P
ATOM 25 OP1 U B 36 74.687 144.572 20.365 1.00 58.01 O
ATOM 26 OP2 U B 36 75.575 146.960 20.643 1.00 56.67 O
ATOM 27 O5' U B 36 73.147 146.424 20.945 1.00 59.05 O
TER
Atoms:
OP1: (65.182,141.505,23.798)
OP2: (66.037,139.129,23.307)
C3': (69.530,141.482,25.826)
C1': (69.940,140.166,27.745)
C5': (66.983,141.508,26.156)
O6: (71.754,134.622,26.289)
O4': (68.561,140.519,27.719)
C8: (69.132,137.997,26.701)
C2: (73.240,137.336,28.052)
C6: (71.839,135.740,26.827)
C5: (70.860,136.769,26.893)
C4: (71.185,137.965,27.500)
P: (65.671,140.185,24.281)
C4': (68.355,141.607,26.777)
C2': (70.658,141.121,26.788)
O2': (71.115,142.230,27.533)
N1: (73.023,136.121,27.454)
N2: (74.443,137.494,28.614)
N3: (72.344,138.316,28.097)
N7: (69.561,136.799,26.409)
N9: (70.075,138.767,27.343)
O5': (66.921,140.388,25.250)
O3': (69.758,142.691,25.103)
OP2: (66.037,139.129,23.307)
C3': (69.530,141.482,25.826)
C1': (69.940,140.166,27.745)
C5': (66.983,141.508,26.156)
O6: (71.754,134.622,26.289)
O4': (68.561,140.519,27.719)
C8: (69.132,137.997,26.701)
C2: (73.240,137.336,28.052)
C6: (71.839,135.740,26.827)
C5: (70.860,136.769,26.893)
C4: (71.185,137.965,27.500)
P: (65.671,140.185,24.281)
C4': (68.355,141.607,26.777)
C2': (70.658,141.121,26.788)
O2': (71.115,142.230,27.533)
N1: (73.023,136.121,27.454)
N2: (74.443,137.494,28.614)
N3: (72.344,138.316,28.097)
N7: (69.561,136.799,26.409)
N9: (70.075,138.767,27.343)
O5': (66.921,140.388,25.250)
O3': (69.758,142.691,25.103)
OP1: (69.399,142.910,22.605)
OP2: (71.281,141.424,23.520)
C3': (74.354,144.480,23.224)
C1': (75.680,144.543,25.165)
C5': (72.374,144.001,24.765)
O4': (74.399,145.019,25.532)
C8: (77.329,144.163,27.043)
O2': (76.668,143.644,23.145)
C6: (76.343,141.225,28.673)
C5: (76.611,142.370,27.920)
C4: (75.769,142.638,26.859)
P: (70.438,142.646,23.634)
C4': (73.498,144.929,24.398)
C2': (75.477,143.708,23.904)
C2: (74.560,140.842,27.251)
N1: (75.289,140.462,28.306)
N3: (74.711,141.903,26.466)
N6: (77.071,140.856,29.730)
N7: (77.593,143.339,28.023)
N9: (76.235,143.807,26.302)
O5': (71.444,143.879,23.677)
O3': (74.878,145.642,22.604)
OP2: (71.281,141.424,23.520)
C3': (74.354,144.480,23.224)
C1': (75.680,144.543,25.165)
C5': (72.374,144.001,24.765)
O4': (74.399,145.019,25.532)
C8: (77.329,144.163,27.043)
O2': (76.668,143.644,23.145)
C6: (76.343,141.225,28.673)
C5: (76.611,142.370,27.920)
C4: (75.769,142.638,26.859)
P: (70.438,142.646,23.634)
C4': (73.498,144.929,24.398)
C2': (75.477,143.708,23.904)
C2: (74.560,140.842,27.251)
N1: (75.289,140.462,28.306)
N3: (74.711,141.903,26.466)
N6: (77.071,140.856,29.730)
N7: (77.593,143.339,28.023)
N9: (76.235,143.807,26.302)
O5': (71.444,143.879,23.677)
O3': (74.878,145.642,22.604)
Image (generated by PyMOL):