Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:056:057
Extra
PDB:
ATOM 1 O3' C A 55 55.808 155.007 29.233 1.00 41.34 O
ATOM 2 P G A 56 57.354 154.828 28.863 1.00 43.17 P
ATOM 3 OP1 G A 56 57.460 154.856 27.388 1.00 43.58 O
ATOM 4 OP2 G A 56 57.855 153.651 29.613 1.00 42.83 O
ATOM 5 O5' G A 56 58.066 156.122 29.460 1.00 41.86 O
ATOM 6 C5' G A 56 57.710 157.447 29.016 1.00 40.71 C
ATOM 7 C4' G A 56 58.683 158.468 29.570 1.00 39.64 C
ATOM 8 O4' G A 56 58.691 158.392 31.022 1.00 39.17 O
ATOM 9 C3' G A 56 60.135 158.304 29.141 1.00 39.64 C
ATOM 10 O3' G A 56 60.761 159.588 29.145 1.00 40.79 O
ATOM 11 C2' G A 56 60.714 157.459 30.273 1.00 39.08 C
ATOM 12 O2' G A 56 62.110 157.624 30.410 1.00 38.00 O
ATOM 13 C1' G A 56 59.984 158.042 31.483 1.00 39.46 C
ATOM 14 N9 G A 56 59.824 157.123 32.610 1.00 41.10 N
ATOM 15 C8 G A 56 58.962 156.055 32.674 1.00 42.74 C
ATOM 16 N7 G A 56 58.996 155.433 33.821 1.00 43.49 N
ATOM 17 C5 G A 56 59.945 156.123 34.561 1.00 41.64 C
ATOM 18 C6 G A 56 60.393 155.916 35.882 1.00 41.06 C
ATOM 19 O6 G A 56 60.037 155.052 36.688 1.00 41.35 O
ATOM 20 N1 G A 56 61.355 156.846 36.246 1.00 40.58 N
ATOM 21 C2 G A 56 61.825 157.848 35.444 1.00 40.05 C
ATOM 22 N2 G A 56 62.750 158.644 35.984 1.00 39.21 N
ATOM 23 N3 G A 56 61.417 158.054 34.205 1.00 41.67 N
ATOM 24 C4 G A 56 60.477 157.162 33.829 1.00 41.46 C
ATOM 25 P A A 57 60.519 160.615 27.932 1.00 38.97 P
ATOM 26 OP1 A A 57 59.588 160.013 26.943 1.00 39.29 O
ATOM 27 OP2 A A 57 61.849 161.083 27.496 1.00 39.11 O
ATOM 28 O5' A A 57 59.757 161.837 28.608 1.00 39.51 O
TER
ATOM 1 O3' G B 56 60.761 159.588 29.145 1.00 40.79 O
ATOM 2 P A B 57 60.519 160.615 27.932 1.00 38.97 P
ATOM 3 OP1 A B 57 59.588 160.013 26.943 1.00 39.29 O
ATOM 4 OP2 A B 57 61.849 161.083 27.496 1.00 39.11 O
ATOM 5 O5' A B 57 59.757 161.837 28.608 1.00 39.51 O
ATOM 6 C5' A B 57 60.219 162.389 29.847 1.00 41.31 C
ATOM 7 C4' A B 57 60.683 163.810 29.643 1.00 43.33 C
ATOM 8 O4' A B 57 61.166 164.322 30.916 1.00 45.17 O
ATOM 9 C3' A B 57 61.841 163.980 28.663 1.00 43.40 C
ATOM 10 O3' A B 57 61.757 165.280 28.063 1.00 40.81 O
ATOM 11 C2' A B 57 63.050 163.889 29.590 1.00 45.17 C
ATOM 12 O2' A B 57 64.229 164.475 29.080 1.00 46.97 O
ATOM 13 C1' A B 57 62.536 164.651 30.810 1.00 46.50 C
ATOM 14 N9 A B 57 63.189 164.304 32.072 1.00 48.75 N
ATOM 15 C8 A B 57 63.847 165.153 32.923 1.00 50.23 C
ATOM 16 N7 A B 57 64.333 164.565 33.989 1.00 51.30 N
ATOM 17 C5 A B 57 63.973 163.236 33.827 1.00 52.06 C
ATOM 18 C6 A B 57 64.198 162.096 34.612 1.00 52.86 C
ATOM 19 N6 A B 57 64.867 162.112 35.767 1.00 53.38 N
ATOM 20 N1 A B 57 63.707 160.921 34.165 1.00 54.50 N
ATOM 21 C2 A B 57 63.037 160.905 33.005 1.00 53.80 C
ATOM 22 N3 A B 57 62.763 161.908 32.178 1.00 52.86 N
ATOM 23 C4 A B 57 63.265 163.060 32.652 1.00 51.43 C
ATOM 24 P U B 58 61.641 165.430 26.465 1.00 38.58 P
ATOM 25 OP1 U B 58 62.557 164.473 25.791 1.00 37.10 O
ATOM 26 OP2 U B 58 61.760 166.877 26.184 1.00 37.44 O
ATOM 27 O5' U B 58 60.141 165.017 26.144 1.00 38.27 O
TER
ATOM 2 P G A 56 57.354 154.828 28.863 1.00 43.17 P
ATOM 3 OP1 G A 56 57.460 154.856 27.388 1.00 43.58 O
ATOM 4 OP2 G A 56 57.855 153.651 29.613 1.00 42.83 O
ATOM 5 O5' G A 56 58.066 156.122 29.460 1.00 41.86 O
ATOM 6 C5' G A 56 57.710 157.447 29.016 1.00 40.71 C
ATOM 7 C4' G A 56 58.683 158.468 29.570 1.00 39.64 C
ATOM 8 O4' G A 56 58.691 158.392 31.022 1.00 39.17 O
ATOM 9 C3' G A 56 60.135 158.304 29.141 1.00 39.64 C
ATOM 10 O3' G A 56 60.761 159.588 29.145 1.00 40.79 O
ATOM 11 C2' G A 56 60.714 157.459 30.273 1.00 39.08 C
ATOM 12 O2' G A 56 62.110 157.624 30.410 1.00 38.00 O
ATOM 13 C1' G A 56 59.984 158.042 31.483 1.00 39.46 C
ATOM 14 N9 G A 56 59.824 157.123 32.610 1.00 41.10 N
ATOM 15 C8 G A 56 58.962 156.055 32.674 1.00 42.74 C
ATOM 16 N7 G A 56 58.996 155.433 33.821 1.00 43.49 N
ATOM 17 C5 G A 56 59.945 156.123 34.561 1.00 41.64 C
ATOM 18 C6 G A 56 60.393 155.916 35.882 1.00 41.06 C
ATOM 19 O6 G A 56 60.037 155.052 36.688 1.00 41.35 O
ATOM 20 N1 G A 56 61.355 156.846 36.246 1.00 40.58 N
ATOM 21 C2 G A 56 61.825 157.848 35.444 1.00 40.05 C
ATOM 22 N2 G A 56 62.750 158.644 35.984 1.00 39.21 N
ATOM 23 N3 G A 56 61.417 158.054 34.205 1.00 41.67 N
ATOM 24 C4 G A 56 60.477 157.162 33.829 1.00 41.46 C
ATOM 25 P A A 57 60.519 160.615 27.932 1.00 38.97 P
ATOM 26 OP1 A A 57 59.588 160.013 26.943 1.00 39.29 O
ATOM 27 OP2 A A 57 61.849 161.083 27.496 1.00 39.11 O
ATOM 28 O5' A A 57 59.757 161.837 28.608 1.00 39.51 O
TER
ATOM 1 O3' G B 56 60.761 159.588 29.145 1.00 40.79 O
ATOM 2 P A B 57 60.519 160.615 27.932 1.00 38.97 P
ATOM 3 OP1 A B 57 59.588 160.013 26.943 1.00 39.29 O
ATOM 4 OP2 A B 57 61.849 161.083 27.496 1.00 39.11 O
ATOM 5 O5' A B 57 59.757 161.837 28.608 1.00 39.51 O
ATOM 6 C5' A B 57 60.219 162.389 29.847 1.00 41.31 C
ATOM 7 C4' A B 57 60.683 163.810 29.643 1.00 43.33 C
ATOM 8 O4' A B 57 61.166 164.322 30.916 1.00 45.17 O
ATOM 9 C3' A B 57 61.841 163.980 28.663 1.00 43.40 C
ATOM 10 O3' A B 57 61.757 165.280 28.063 1.00 40.81 O
ATOM 11 C2' A B 57 63.050 163.889 29.590 1.00 45.17 C
ATOM 12 O2' A B 57 64.229 164.475 29.080 1.00 46.97 O
ATOM 13 C1' A B 57 62.536 164.651 30.810 1.00 46.50 C
ATOM 14 N9 A B 57 63.189 164.304 32.072 1.00 48.75 N
ATOM 15 C8 A B 57 63.847 165.153 32.923 1.00 50.23 C
ATOM 16 N7 A B 57 64.333 164.565 33.989 1.00 51.30 N
ATOM 17 C5 A B 57 63.973 163.236 33.827 1.00 52.06 C
ATOM 18 C6 A B 57 64.198 162.096 34.612 1.00 52.86 C
ATOM 19 N6 A B 57 64.867 162.112 35.767 1.00 53.38 N
ATOM 20 N1 A B 57 63.707 160.921 34.165 1.00 54.50 N
ATOM 21 C2 A B 57 63.037 160.905 33.005 1.00 53.80 C
ATOM 22 N3 A B 57 62.763 161.908 32.178 1.00 52.86 N
ATOM 23 C4 A B 57 63.265 163.060 32.652 1.00 51.43 C
ATOM 24 P U B 58 61.641 165.430 26.465 1.00 38.58 P
ATOM 25 OP1 U B 58 62.557 164.473 25.791 1.00 37.10 O
ATOM 26 OP2 U B 58 61.760 166.877 26.184 1.00 37.44 O
ATOM 27 O5' U B 58 60.141 165.017 26.144 1.00 38.27 O
TER
Atoms:
OP1: (57.460,154.856,27.388)
OP2: (57.855,153.651,29.613)
C3': (60.135,158.304,29.141)
C1': (59.984,158.042,31.483)
C5': (57.710,157.447,29.016)
O6: (60.037,155.052,36.688)
O4': (58.691,158.392,31.022)
C8: (58.962,156.055,32.674)
C2: (61.825,157.848,35.444)
C6: (60.393,155.916,35.882)
C5: (59.945,156.123,34.561)
C4: (60.477,157.162,33.829)
P: (57.354,154.828,28.863)
C4': (58.683,158.468,29.570)
C2': (60.714,157.459,30.273)
O2': (62.110,157.624,30.410)
N1: (61.355,156.846,36.246)
N2: (62.750,158.644,35.984)
N3: (61.417,158.054,34.205)
N7: (58.996,155.433,33.821)
N9: (59.824,157.123,32.610)
O5': (58.066,156.122,29.460)
O3': (60.761,159.588,29.145)
OP2: (57.855,153.651,29.613)
C3': (60.135,158.304,29.141)
C1': (59.984,158.042,31.483)
C5': (57.710,157.447,29.016)
O6: (60.037,155.052,36.688)
O4': (58.691,158.392,31.022)
C8: (58.962,156.055,32.674)
C2: (61.825,157.848,35.444)
C6: (60.393,155.916,35.882)
C5: (59.945,156.123,34.561)
C4: (60.477,157.162,33.829)
P: (57.354,154.828,28.863)
C4': (58.683,158.468,29.570)
C2': (60.714,157.459,30.273)
O2': (62.110,157.624,30.410)
N1: (61.355,156.846,36.246)
N2: (62.750,158.644,35.984)
N3: (61.417,158.054,34.205)
N7: (58.996,155.433,33.821)
N9: (59.824,157.123,32.610)
O5': (58.066,156.122,29.460)
O3': (60.761,159.588,29.145)
OP1: (59.588,160.013,26.943)
OP2: (61.849,161.083,27.496)
C3': (61.841,163.980,28.663)
C1': (62.536,164.651,30.810)
C5': (60.219,162.389,29.847)
O4': (61.166,164.322,30.916)
C8: (63.847,165.153,32.923)
O2': (64.229,164.475,29.080)
C6: (64.198,162.096,34.612)
C5: (63.973,163.236,33.827)
C4: (63.265,163.060,32.652)
P: (60.519,160.615,27.932)
C4': (60.683,163.810,29.643)
C2': (63.050,163.889,29.590)
C2: (63.037,160.905,33.005)
N1: (63.707,160.921,34.165)
N3: (62.763,161.908,32.178)
N6: (64.867,162.112,35.767)
N7: (64.333,164.565,33.989)
N9: (63.189,164.304,32.072)
O5': (59.757,161.837,28.608)
O3': (61.757,165.280,28.063)
OP2: (61.849,161.083,27.496)
C3': (61.841,163.980,28.663)
C1': (62.536,164.651,30.810)
C5': (60.219,162.389,29.847)
O4': (61.166,164.322,30.916)
C8: (63.847,165.153,32.923)
O2': (64.229,164.475,29.080)
C6: (64.198,162.096,34.612)
C5: (63.973,163.236,33.827)
C4: (63.265,163.060,32.652)
P: (60.519,160.615,27.932)
C4': (60.683,163.810,29.643)
C2': (63.050,163.889,29.590)
C2: (63.037,160.905,33.005)
N1: (63.707,160.921,34.165)
N3: (62.763,161.908,32.178)
N6: (64.867,162.112,35.767)
N7: (64.333,164.565,33.989)
N9: (63.189,164.304,32.072)
O5': (59.757,161.837,28.608)
O3': (61.757,165.280,28.063)
Image (generated by PyMOL):