Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A873:A789
Extra
PDB:
ATOM 1 O3' A A 872 -15.132 110.417 109.480 1.00 0.91 O
ATOM 2 P A A 873 -15.933 109.229 108.758 1.00 9.27 P
ATOM 3 OP1 A A 873 -17.076 108.825 109.643 1.00 17.74 O
ATOM 4 OP2 A A 873 -14.928 108.227 108.336 1.00 15.38 O
ATOM 5 O5' A A 873 -16.542 109.917 107.456 1.00 21.56 O
ATOM 6 C5' A A 873 -17.622 110.868 107.565 1.00 20.60 C
ATOM 7 C4' A A 873 -17.905 111.487 106.219 1.00 20.63 C
ATOM 8 O4' A A 873 -16.734 112.226 105.784 1.00 22.13 O
ATOM 9 C3' A A 873 -18.191 110.493 105.105 1.00 21.22 C
ATOM 10 O3' A A 873 -19.584 110.157 105.053 1.00 23.58 O
ATOM 11 C2' A A 873 -17.738 111.246 103.859 1.00 21.62 C
ATOM 12 O2' A A 873 -18.751 112.103 103.379 1.00 21.33 O
ATOM 13 C1' A A 873 -16.569 112.080 104.393 1.00 21.48 C
ATOM 14 N9 A A 873 -15.270 111.459 104.173 1.00 12.14 N
ATOM 15 C8 A A 873 -14.619 110.534 104.953 1.00 11.96 C
ATOM 16 N7 A A 873 -13.462 110.144 104.462 1.00 12.80 N
ATOM 17 C5 A A 873 -13.352 110.859 103.286 1.00 11.71 C
ATOM 18 C6 A A 873 -12.376 110.879 102.297 1.00 12.93 C
ATOM 19 N6 A A 873 -11.289 110.108 102.308 1.00 15.03 N
ATOM 20 N1 A A 873 -12.558 111.722 101.267 1.00 11.75 N
ATOM 21 C2 A A 873 -13.664 112.471 101.234 1.00 10.92 C
ATOM 22 N3 A A 873 -14.670 112.522 102.095 1.00 13.55 N
ATOM 23 C4 A A 873 -14.450 111.685 103.107 1.00 11.64 C
ATOM 24 P G A 874 -20.033 108.681 104.600 1.00 58.31 P
ATOM 25 OP1 G A 874 -20.955 108.839 103.454 1.00 29.04 O
ATOM 26 OP2 G A 874 -20.472 107.921 105.798 1.00 31.16 O
ATOM 27 O5' G A 874 -18.682 108.028 104.073 1.00 10.48 O
TER
ATOM 1 O3' C B 788 -4.216 112.389 101.181 1.00 0.79 O
ATOM 2 P C B 789 -4.548 111.205 100.162 1.00 13.17 P
ATOM 3 OP1 C B 789 -4.263 109.904 100.834 1.00 19.44 O
ATOM 4 OP2 C B 789 -3.853 111.547 98.884 1.00 16.79 O
ATOM 5 O5' C B 789 -6.123 111.329 99.982 1.00 0.79 O
ATOM 6 C5' C B 789 -6.998 111.054 101.076 1.00 0.79 C
ATOM 7 C4' C B 789 -8.415 111.370 100.685 1.00 0.79 C
ATOM 8 O4' C B 789 -8.453 112.758 100.315 1.00 0.79 O
ATOM 9 C3' C B 789 -8.953 110.629 99.468 1.00 0.79 C
ATOM 10 O3' C B 789 -9.609 109.424 99.836 1.00 0.79 O
ATOM 11 C2' C B 789 -9.976 111.594 98.888 1.00 0.79 C
ATOM 12 O2' C B 789 -11.249 111.487 99.466 1.00 0.79 O
ATOM 13 C1' C B 789 -9.385 112.943 99.265 1.00 0.79 C
ATOM 14 N1 C B 789 -8.729 113.637 98.154 1.00 0.79 N
ATOM 15 C2 C B 789 -9.521 114.271 97.216 1.00 0.79 C
ATOM 16 O2 C B 789 -10.754 114.161 97.309 1.00 0.79 O
ATOM 17 N3 C B 789 -8.938 114.981 96.228 1.00 0.79 N
ATOM 18 C4 C B 789 -7.608 115.044 96.149 1.00 0.79 C
ATOM 19 N4 C B 789 -7.065 115.760 95.154 1.00 0.79 N
ATOM 20 C5 C B 789 -6.771 114.375 97.083 1.00 0.79 C
ATOM 21 C6 C B 789 -7.369 113.686 98.059 1.00 0.79 C
ATOM 22 P C B 790 -9.309 108.068 99.020 1.00 1.23 P
ATOM 23 OP1 C B 790 -10.401 107.137 99.390 1.00 3.15 O
ATOM 24 OP2 C B 790 -7.876 107.684 99.241 1.00 2.64 O
ATOM 25 O5' C B 790 -9.469 108.453 97.479 1.00 11.01 O
TER
ATOM 2 P A A 873 -15.933 109.229 108.758 1.00 9.27 P
ATOM 3 OP1 A A 873 -17.076 108.825 109.643 1.00 17.74 O
ATOM 4 OP2 A A 873 -14.928 108.227 108.336 1.00 15.38 O
ATOM 5 O5' A A 873 -16.542 109.917 107.456 1.00 21.56 O
ATOM 6 C5' A A 873 -17.622 110.868 107.565 1.00 20.60 C
ATOM 7 C4' A A 873 -17.905 111.487 106.219 1.00 20.63 C
ATOM 8 O4' A A 873 -16.734 112.226 105.784 1.00 22.13 O
ATOM 9 C3' A A 873 -18.191 110.493 105.105 1.00 21.22 C
ATOM 10 O3' A A 873 -19.584 110.157 105.053 1.00 23.58 O
ATOM 11 C2' A A 873 -17.738 111.246 103.859 1.00 21.62 C
ATOM 12 O2' A A 873 -18.751 112.103 103.379 1.00 21.33 O
ATOM 13 C1' A A 873 -16.569 112.080 104.393 1.00 21.48 C
ATOM 14 N9 A A 873 -15.270 111.459 104.173 1.00 12.14 N
ATOM 15 C8 A A 873 -14.619 110.534 104.953 1.00 11.96 C
ATOM 16 N7 A A 873 -13.462 110.144 104.462 1.00 12.80 N
ATOM 17 C5 A A 873 -13.352 110.859 103.286 1.00 11.71 C
ATOM 18 C6 A A 873 -12.376 110.879 102.297 1.00 12.93 C
ATOM 19 N6 A A 873 -11.289 110.108 102.308 1.00 15.03 N
ATOM 20 N1 A A 873 -12.558 111.722 101.267 1.00 11.75 N
ATOM 21 C2 A A 873 -13.664 112.471 101.234 1.00 10.92 C
ATOM 22 N3 A A 873 -14.670 112.522 102.095 1.00 13.55 N
ATOM 23 C4 A A 873 -14.450 111.685 103.107 1.00 11.64 C
ATOM 24 P G A 874 -20.033 108.681 104.600 1.00 58.31 P
ATOM 25 OP1 G A 874 -20.955 108.839 103.454 1.00 29.04 O
ATOM 26 OP2 G A 874 -20.472 107.921 105.798 1.00 31.16 O
ATOM 27 O5' G A 874 -18.682 108.028 104.073 1.00 10.48 O
TER
ATOM 1 O3' C B 788 -4.216 112.389 101.181 1.00 0.79 O
ATOM 2 P C B 789 -4.548 111.205 100.162 1.00 13.17 P
ATOM 3 OP1 C B 789 -4.263 109.904 100.834 1.00 19.44 O
ATOM 4 OP2 C B 789 -3.853 111.547 98.884 1.00 16.79 O
ATOM 5 O5' C B 789 -6.123 111.329 99.982 1.00 0.79 O
ATOM 6 C5' C B 789 -6.998 111.054 101.076 1.00 0.79 C
ATOM 7 C4' C B 789 -8.415 111.370 100.685 1.00 0.79 C
ATOM 8 O4' C B 789 -8.453 112.758 100.315 1.00 0.79 O
ATOM 9 C3' C B 789 -8.953 110.629 99.468 1.00 0.79 C
ATOM 10 O3' C B 789 -9.609 109.424 99.836 1.00 0.79 O
ATOM 11 C2' C B 789 -9.976 111.594 98.888 1.00 0.79 C
ATOM 12 O2' C B 789 -11.249 111.487 99.466 1.00 0.79 O
ATOM 13 C1' C B 789 -9.385 112.943 99.265 1.00 0.79 C
ATOM 14 N1 C B 789 -8.729 113.637 98.154 1.00 0.79 N
ATOM 15 C2 C B 789 -9.521 114.271 97.216 1.00 0.79 C
ATOM 16 O2 C B 789 -10.754 114.161 97.309 1.00 0.79 O
ATOM 17 N3 C B 789 -8.938 114.981 96.228 1.00 0.79 N
ATOM 18 C4 C B 789 -7.608 115.044 96.149 1.00 0.79 C
ATOM 19 N4 C B 789 -7.065 115.760 95.154 1.00 0.79 N
ATOM 20 C5 C B 789 -6.771 114.375 97.083 1.00 0.79 C
ATOM 21 C6 C B 789 -7.369 113.686 98.059 1.00 0.79 C
ATOM 22 P C B 790 -9.309 108.068 99.020 1.00 1.23 P
ATOM 23 OP1 C B 790 -10.401 107.137 99.390 1.00 3.15 O
ATOM 24 OP2 C B 790 -7.876 107.684 99.241 1.00 2.64 O
ATOM 25 O5' C B 790 -9.469 108.453 97.479 1.00 11.01 O
TER
Atoms:
OP1: (-17.076,108.825,109.643)
OP2: (-14.928,108.227,108.336)
C3': (-18.191,110.493,105.105)
C1': (-16.569,112.080,104.393)
C5': (-17.622,110.868,107.565)
O4': (-16.734,112.226,105.784)
C8: (-14.619,110.534,104.953)
O2': (-18.751,112.103,103.379)
C6: (-12.376,110.879,102.297)
C5: (-13.352,110.859,103.286)
C4: (-14.450,111.685,103.107)
P: (-15.933,109.229,108.758)
C4': (-17.905,111.487,106.219)
C2': (-17.738,111.246,103.859)
C2: (-13.664,112.471,101.234)
N1: (-12.558,111.722,101.267)
N3: (-14.670,112.522,102.095)
N6: (-11.289,110.108,102.308)
N7: (-13.462,110.144,104.462)
N9: (-15.270,111.459,104.173)
O5': (-16.542,109.917,107.456)
O3': (-19.584,110.157,105.053)
OP2: (-14.928,108.227,108.336)
C3': (-18.191,110.493,105.105)
C1': (-16.569,112.080,104.393)
C5': (-17.622,110.868,107.565)
O4': (-16.734,112.226,105.784)
C8: (-14.619,110.534,104.953)
O2': (-18.751,112.103,103.379)
C6: (-12.376,110.879,102.297)
C5: (-13.352,110.859,103.286)
C4: (-14.450,111.685,103.107)
P: (-15.933,109.229,108.758)
C4': (-17.905,111.487,106.219)
C2': (-17.738,111.246,103.859)
C2: (-13.664,112.471,101.234)
N1: (-12.558,111.722,101.267)
N3: (-14.670,112.522,102.095)
N6: (-11.289,110.108,102.308)
N7: (-13.462,110.144,104.462)
N9: (-15.270,111.459,104.173)
O5': (-16.542,109.917,107.456)
O3': (-19.584,110.157,105.053)
C2: (-9.521,114.271,97.216)
OP1: (-4.263,109.904,100.834)
OP2: (-3.853,111.547,98.884)
C4: (-7.608,115.044,96.149)
O5': (-6.123,111.329,99.982)
C3': (-8.953,110.629,99.468)
C1': (-9.385,112.943,99.265)
O4': (-8.453,112.758,100.315)
C5': (-6.998,111.054,101.076)
P: (-4.548,111.205,100.162)
O2: (-10.754,114.161,97.309)
C4': (-8.415,111.370,100.685)
C2': (-9.976,111.594,98.888)
O2': (-11.249,111.487,99.466)
N1: (-8.729,113.637,98.154)
N3: (-8.938,114.981,96.228)
N4: (-7.065,115.760,95.154)
C6: (-7.369,113.686,98.059)
C5: (-6.771,114.375,97.083)
O3': (-9.609,109.424,99.836)
OP1: (-4.263,109.904,100.834)
OP2: (-3.853,111.547,98.884)
C4: (-7.608,115.044,96.149)
O5': (-6.123,111.329,99.982)
C3': (-8.953,110.629,99.468)
C1': (-9.385,112.943,99.265)
O4': (-8.453,112.758,100.315)
C5': (-6.998,111.054,101.076)
P: (-4.548,111.205,100.162)
O2: (-10.754,114.161,97.309)
C4': (-8.415,111.370,100.685)
C2': (-9.976,111.594,98.888)
O2': (-11.249,111.487,99.466)
N1: (-8.729,113.637,98.154)
N3: (-8.938,114.981,96.228)
N4: (-7.065,115.760,95.154)
C6: (-7.369,113.686,98.059)
C5: (-6.771,114.375,97.083)
O3': (-9.609,109.424,99.836)
Image (generated by PyMOL):