Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1215:A1273
Extra
PDB:
ATOM 1 O3' A A1214 249.738 126.813 -16.698 1.00 74.33 O
ATOM 2 P A A1215 250.572 127.400 -17.943 1.00 76.05 P
ATOM 3 OP1 A A1215 249.647 128.151 -18.845 1.00 74.62 O
ATOM 4 OP2 A A1215 251.369 126.262 -18.459 1.00 76.64 O
ATOM 5 O5' A A1215 251.570 128.481 -17.301 1.00 76.68 O
ATOM 6 C5' A A1215 251.077 129.732 -16.776 1.00 76.33 C
ATOM 7 C4' A A1215 252.126 130.821 -16.902 1.00 76.09 C
ATOM 8 O4' A A1215 253.292 130.466 -16.114 1.00 75.57 O
ATOM 9 C3' A A1215 252.638 131.133 -18.306 1.00 76.06 C
ATOM 10 O3' A A1215 252.818 132.538 -18.450 1.00 76.24 O
ATOM 11 C2' A A1215 253.992 130.431 -18.344 1.00 75.62 C
ATOM 12 O2' A A1215 254.922 130.989 -19.248 1.00 75.65 O
ATOM 13 C1' A A1215 254.450 130.607 -16.902 1.00 74.81 C
ATOM 14 N9 A A1215 255.446 129.641 -16.457 1.00 73.88 N
ATOM 15 C8 A A1215 255.283 128.337 -16.064 1.00 74.09 C
ATOM 16 N7 A A1215 256.401 127.743 -15.727 1.00 73.29 N
ATOM 17 C5 A A1215 257.364 128.724 -15.910 1.00 74.21 C
ATOM 18 C6 A A1215 258.752 128.723 -15.737 1.00 74.54 C
ATOM 19 N6 A A1215 259.437 127.656 -15.328 1.00 75.40 N
ATOM 20 N1 A A1215 259.423 129.867 -16.008 1.00 74.77 N
ATOM 21 C2 A A1215 258.727 130.934 -16.431 1.00 74.83 C
ATOM 22 N3 A A1215 257.419 131.056 -16.636 1.00 74.58 N
ATOM 23 C4 A A1215 256.788 129.900 -16.354 1.00 74.54 C
ATOM 24 P U A1216 251.744 133.394 -19.288 1.00 78.49 P
ATOM 25 OP1 U A1216 251.015 132.417 -20.156 1.00 80.16 O
ATOM 26 OP2 U A1216 252.373 134.588 -19.912 1.00 77.10 O
ATOM 27 O5' U A1216 250.717 133.871 -18.180 1.00 79.28 O
TER
ATOM 1 O3' C B1272 265.035 127.000 -13.337 1.00 88.30 O
ATOM 2 P C B1273 265.958 126.782 -14.634 1.00 88.44 P
ATOM 3 OP1 C B1273 266.553 125.416 -14.453 1.00 86.88 O
ATOM 4 OP2 C B1273 266.841 127.964 -14.822 1.00 88.80 O
ATOM 5 O5' C B1273 264.910 126.733 -15.824 1.00 86.46 O
ATOM 6 C5' C B1273 263.913 125.704 -15.858 1.00 83.61 C
ATOM 7 C4' C B1273 262.972 125.934 -16.999 1.00 81.32 C
ATOM 8 O4' C B1273 262.322 127.216 -16.815 1.00 81.32 O
ATOM 9 C3' C B1273 263.586 125.947 -18.393 1.00 80.79 C
ATOM 10 O3' C B1273 262.692 125.314 -19.267 1.00 80.14 O
ATOM 11 C2' C B1273 263.641 127.432 -18.741 1.00 81.50 C
ATOM 12 O2' C B1273 263.472 127.687 -20.120 1.00 81.83 O
ATOM 13 C1' C B1273 262.426 127.969 -17.999 1.00 81.56 C
ATOM 14 N1 C B1273 262.529 129.392 -17.656 1.00 82.16 N
ATOM 15 C2 C B1273 261.763 130.317 -18.384 1.00 84.01 C
ATOM 16 O2 C B1273 261.023 129.909 -19.302 1.00 85.93 O
ATOM 17 N3 C B1273 261.845 131.628 -18.075 1.00 83.86 N
ATOM 18 C4 C B1273 262.650 132.032 -17.093 1.00 82.94 C
ATOM 19 N4 C B1273 262.699 133.339 -16.828 1.00 83.22 N
ATOM 20 C5 C B1273 263.440 131.115 -16.338 1.00 83.06 C
ATOM 21 C6 C B1273 263.350 129.817 -16.650 1.00 82.52 C
ATOM 22 P C B1274 263.176 124.068 -20.149 1.00 79.45 P
ATOM 23 OP1 C B1274 264.175 123.290 -19.353 1.00 79.20 O
ATOM 24 OP2 C B1274 263.512 124.586 -21.496 1.00 79.98 O
ATOM 25 O5' C B1274 261.868 123.185 -20.259 1.00 80.67 O
TER
ATOM 2 P A A1215 250.572 127.400 -17.943 1.00 76.05 P
ATOM 3 OP1 A A1215 249.647 128.151 -18.845 1.00 74.62 O
ATOM 4 OP2 A A1215 251.369 126.262 -18.459 1.00 76.64 O
ATOM 5 O5' A A1215 251.570 128.481 -17.301 1.00 76.68 O
ATOM 6 C5' A A1215 251.077 129.732 -16.776 1.00 76.33 C
ATOM 7 C4' A A1215 252.126 130.821 -16.902 1.00 76.09 C
ATOM 8 O4' A A1215 253.292 130.466 -16.114 1.00 75.57 O
ATOM 9 C3' A A1215 252.638 131.133 -18.306 1.00 76.06 C
ATOM 10 O3' A A1215 252.818 132.538 -18.450 1.00 76.24 O
ATOM 11 C2' A A1215 253.992 130.431 -18.344 1.00 75.62 C
ATOM 12 O2' A A1215 254.922 130.989 -19.248 1.00 75.65 O
ATOM 13 C1' A A1215 254.450 130.607 -16.902 1.00 74.81 C
ATOM 14 N9 A A1215 255.446 129.641 -16.457 1.00 73.88 N
ATOM 15 C8 A A1215 255.283 128.337 -16.064 1.00 74.09 C
ATOM 16 N7 A A1215 256.401 127.743 -15.727 1.00 73.29 N
ATOM 17 C5 A A1215 257.364 128.724 -15.910 1.00 74.21 C
ATOM 18 C6 A A1215 258.752 128.723 -15.737 1.00 74.54 C
ATOM 19 N6 A A1215 259.437 127.656 -15.328 1.00 75.40 N
ATOM 20 N1 A A1215 259.423 129.867 -16.008 1.00 74.77 N
ATOM 21 C2 A A1215 258.727 130.934 -16.431 1.00 74.83 C
ATOM 22 N3 A A1215 257.419 131.056 -16.636 1.00 74.58 N
ATOM 23 C4 A A1215 256.788 129.900 -16.354 1.00 74.54 C
ATOM 24 P U A1216 251.744 133.394 -19.288 1.00 78.49 P
ATOM 25 OP1 U A1216 251.015 132.417 -20.156 1.00 80.16 O
ATOM 26 OP2 U A1216 252.373 134.588 -19.912 1.00 77.10 O
ATOM 27 O5' U A1216 250.717 133.871 -18.180 1.00 79.28 O
TER
ATOM 1 O3' C B1272 265.035 127.000 -13.337 1.00 88.30 O
ATOM 2 P C B1273 265.958 126.782 -14.634 1.00 88.44 P
ATOM 3 OP1 C B1273 266.553 125.416 -14.453 1.00 86.88 O
ATOM 4 OP2 C B1273 266.841 127.964 -14.822 1.00 88.80 O
ATOM 5 O5' C B1273 264.910 126.733 -15.824 1.00 86.46 O
ATOM 6 C5' C B1273 263.913 125.704 -15.858 1.00 83.61 C
ATOM 7 C4' C B1273 262.972 125.934 -16.999 1.00 81.32 C
ATOM 8 O4' C B1273 262.322 127.216 -16.815 1.00 81.32 O
ATOM 9 C3' C B1273 263.586 125.947 -18.393 1.00 80.79 C
ATOM 10 O3' C B1273 262.692 125.314 -19.267 1.00 80.14 O
ATOM 11 C2' C B1273 263.641 127.432 -18.741 1.00 81.50 C
ATOM 12 O2' C B1273 263.472 127.687 -20.120 1.00 81.83 O
ATOM 13 C1' C B1273 262.426 127.969 -17.999 1.00 81.56 C
ATOM 14 N1 C B1273 262.529 129.392 -17.656 1.00 82.16 N
ATOM 15 C2 C B1273 261.763 130.317 -18.384 1.00 84.01 C
ATOM 16 O2 C B1273 261.023 129.909 -19.302 1.00 85.93 O
ATOM 17 N3 C B1273 261.845 131.628 -18.075 1.00 83.86 N
ATOM 18 C4 C B1273 262.650 132.032 -17.093 1.00 82.94 C
ATOM 19 N4 C B1273 262.699 133.339 -16.828 1.00 83.22 N
ATOM 20 C5 C B1273 263.440 131.115 -16.338 1.00 83.06 C
ATOM 21 C6 C B1273 263.350 129.817 -16.650 1.00 82.52 C
ATOM 22 P C B1274 263.176 124.068 -20.149 1.00 79.45 P
ATOM 23 OP1 C B1274 264.175 123.290 -19.353 1.00 79.20 O
ATOM 24 OP2 C B1274 263.512 124.586 -21.496 1.00 79.98 O
ATOM 25 O5' C B1274 261.868 123.185 -20.259 1.00 80.67 O
TER
Atoms:
OP1: (249.647,128.151,-18.845)
OP2: (251.369,126.262,-18.459)
C3': (252.638,131.133,-18.306)
C1': (254.450,130.607,-16.902)
C5': (251.077,129.732,-16.776)
O4': (253.292,130.466,-16.114)
C8: (255.283,128.337,-16.064)
O2': (254.922,130.989,-19.248)
C6: (258.752,128.723,-15.737)
C5: (257.364,128.724,-15.910)
C4: (256.788,129.900,-16.354)
P: (250.572,127.400,-17.943)
C4': (252.126,130.821,-16.902)
C2': (253.992,130.431,-18.344)
C2: (258.727,130.934,-16.431)
N1: (259.423,129.867,-16.008)
N3: (257.419,131.056,-16.636)
N6: (259.437,127.656,-15.328)
N7: (256.401,127.743,-15.727)
N9: (255.446,129.641,-16.457)
O5': (251.570,128.481,-17.301)
O3': (252.818,132.538,-18.450)
OP2: (251.369,126.262,-18.459)
C3': (252.638,131.133,-18.306)
C1': (254.450,130.607,-16.902)
C5': (251.077,129.732,-16.776)
O4': (253.292,130.466,-16.114)
C8: (255.283,128.337,-16.064)
O2': (254.922,130.989,-19.248)
C6: (258.752,128.723,-15.737)
C5: (257.364,128.724,-15.910)
C4: (256.788,129.900,-16.354)
P: (250.572,127.400,-17.943)
C4': (252.126,130.821,-16.902)
C2': (253.992,130.431,-18.344)
C2: (258.727,130.934,-16.431)
N1: (259.423,129.867,-16.008)
N3: (257.419,131.056,-16.636)
N6: (259.437,127.656,-15.328)
N7: (256.401,127.743,-15.727)
N9: (255.446,129.641,-16.457)
O5': (251.570,128.481,-17.301)
O3': (252.818,132.538,-18.450)
C2: (261.763,130.317,-18.384)
OP1: (266.553,125.416,-14.453)
OP2: (266.841,127.964,-14.822)
C4: (262.650,132.032,-17.093)
O5': (264.910,126.733,-15.824)
C3': (263.586,125.947,-18.393)
C1': (262.426,127.969,-17.999)
O4': (262.322,127.216,-16.815)
C5': (263.913,125.704,-15.858)
P: (265.958,126.782,-14.634)
O2: (261.023,129.909,-19.302)
C4': (262.972,125.934,-16.999)
C2': (263.641,127.432,-18.741)
O2': (263.472,127.687,-20.120)
N1: (262.529,129.392,-17.656)
N3: (261.845,131.628,-18.075)
N4: (262.699,133.339,-16.828)
C6: (263.350,129.817,-16.650)
C5: (263.440,131.115,-16.338)
O3': (262.692,125.314,-19.267)
OP1: (266.553,125.416,-14.453)
OP2: (266.841,127.964,-14.822)
C4: (262.650,132.032,-17.093)
O5': (264.910,126.733,-15.824)
C3': (263.586,125.947,-18.393)
C1': (262.426,127.969,-17.999)
O4': (262.322,127.216,-16.815)
C5': (263.913,125.704,-15.858)
P: (265.958,126.782,-14.634)
O2: (261.023,129.909,-19.302)
C4': (262.972,125.934,-16.999)
C2': (263.641,127.432,-18.741)
O2': (263.472,127.687,-20.120)
N1: (262.529,129.392,-17.656)
N3: (261.845,131.628,-18.075)
N4: (262.699,133.339,-16.828)
C6: (263.350,129.817,-16.650)
C5: (263.440,131.115,-16.338)
O3': (262.692,125.314,-19.267)
Image (generated by PyMOL):