Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1273:A1556
Extra
PDB:
ATOM 1 O3' U A1272 41.462 -73.805 -14.868 1.00 25.69 O
ATOM 2 P G A1273 41.975 -73.821 -13.337 1.00 33.66 P
ATOM 3 OP1 G A1273 42.942 -72.728 -13.186 1.00 38.67 O
ATOM 4 OP2 G A1273 42.416 -75.211 -13.032 1.00 44.18 O
ATOM 5 O5' G A1273 40.629 -73.478 -12.534 1.00 39.93 O
ATOM 6 C5' G A1273 39.818 -72.351 -12.897 1.00 23.04 C
ATOM 7 C4' G A1273 38.836 -71.989 -11.819 1.00 18.37 C
ATOM 8 O4' G A1273 37.667 -72.829 -11.974 1.00 36.17 O
ATOM 9 C3' G A1273 39.325 -72.202 -10.381 1.00 29.71 C
ATOM 10 O3' G A1273 38.724 -71.240 -9.506 1.00 21.68 O
ATOM 11 C2' G A1273 38.751 -73.567 -10.052 1.00 25.95 C
ATOM 12 O2' G A1273 38.590 -73.791 -8.673 1.00 33.73 O
ATOM 13 C1' G A1273 37.405 -73.487 -10.770 1.00 27.73 C
ATOM 14 N9 G A1273 36.779 -74.780 -11.053 1.00 30.25 N
ATOM 15 C8 G A1273 37.372 -75.961 -11.393 1.00 37.59 C
ATOM 16 N7 G A1273 36.557 -76.972 -11.526 1.00 33.32 N
ATOM 17 C5 G A1273 35.334 -76.410 -11.235 1.00 31.81 C
ATOM 18 C6 G A1273 34.084 -77.030 -11.203 1.00 32.76 C
ATOM 19 O6 G A1273 33.825 -78.227 -11.450 1.00 34.96 O
ATOM 20 N1 G A1273 33.125 -76.101 -10.847 1.00 31.31 N
ATOM 21 C2 G A1273 33.346 -74.787 -10.563 1.00 31.39 C
ATOM 22 N2 G A1273 32.291 -74.043 -10.243 1.00 34.97 N
ATOM 23 N3 G A1273 34.507 -74.214 -10.604 1.00 32.41 N
ATOM 24 C4 G A1273 35.449 -75.078 -10.949 1.00 30.91 C
ATOM 25 P G A1274 39.524 -69.940 -9.001 1.00 18.47 P
ATOM 26 OP1 G A1274 38.812 -69.399 -7.785 1.00 25.82 O
ATOM 27 OP2 G A1274 39.672 -69.049 -10.184 1.00 27.55 O
ATOM 28 O5' G A1274 40.943 -70.511 -8.568 1.00 29.60 O
TER
ATOM 1 O3' C B1555 42.618 -66.635 -14.660 1.00 27.33 O
ATOM 2 P A B1556 41.108 -66.920 -15.097 1.00 22.73 P
ATOM 3 OP1 A B1556 40.953 -68.397 -15.177 1.00 29.91 O
ATOM 4 OP2 A B1556 40.842 -66.105 -16.313 1.00 30.59 O
ATOM 5 O5' A B1556 40.256 -66.342 -13.880 1.00 31.37 O
ATOM 6 C5' A B1556 39.887 -64.968 -13.829 1.00 22.22 C
ATOM 7 C4' A B1556 39.063 -64.660 -12.618 1.00 19.87 C
ATOM 8 O4' A B1556 37.984 -65.643 -12.504 1.00 24.33 O
ATOM 9 C3' A B1556 39.812 -64.710 -11.286 1.00 26.15 C
ATOM 10 O3' A B1556 39.354 -63.638 -10.447 1.00 33.27 O
ATOM 11 C2' A B1556 39.337 -66.050 -10.710 1.00 24.84 C
ATOM 12 O2' A B1556 39.469 -66.188 -9.308 1.00 29.70 O
ATOM 13 C1' A B1556 37.891 -66.008 -11.158 1.00 29.47 C
ATOM 14 N9 A B1556 37.122 -67.255 -10.977 1.00 33.13 N
ATOM 15 C8 A B1556 36.475 -67.560 -9.771 1.00 42.60 C
ATOM 16 N7 A B1556 35.832 -68.693 -9.652 1.00 22.25 N
ATOM 17 C5 A B1556 36.072 -69.172 -10.908 1.00 28.97 C
ATOM 18 C6 A B1556 35.658 -70.373 -11.430 1.00 32.66 C
ATOM 19 N6 A B1556 34.927 -71.237 -10.742 1.00 32.55 N
ATOM 20 N1 A B1556 36.020 -70.619 -12.710 1.00 48.86 N
ATOM 21 C2 A B1556 36.761 -69.694 -13.381 1.00 46.55 C
ATOM 22 N3 A B1556 37.218 -68.504 -12.975 1.00 32.24 N
ATOM 23 C4 A B1556 36.830 -68.321 -11.729 1.00 26.85 C
ATOM 24 P C B1557 40.301 -62.365 -10.172 1.00 29.23 P
ATOM 25 OP1 C B1557 39.674 -61.497 -9.144 1.00 30.30 O
ATOM 26 OP2 C B1557 40.602 -61.792 -11.497 1.00 30.40 O
ATOM 27 O5' C B1557 41.579 -63.040 -9.541 1.00 41.65 O
TER
ATOM 2 P G A1273 41.975 -73.821 -13.337 1.00 33.66 P
ATOM 3 OP1 G A1273 42.942 -72.728 -13.186 1.00 38.67 O
ATOM 4 OP2 G A1273 42.416 -75.211 -13.032 1.00 44.18 O
ATOM 5 O5' G A1273 40.629 -73.478 -12.534 1.00 39.93 O
ATOM 6 C5' G A1273 39.818 -72.351 -12.897 1.00 23.04 C
ATOM 7 C4' G A1273 38.836 -71.989 -11.819 1.00 18.37 C
ATOM 8 O4' G A1273 37.667 -72.829 -11.974 1.00 36.17 O
ATOM 9 C3' G A1273 39.325 -72.202 -10.381 1.00 29.71 C
ATOM 10 O3' G A1273 38.724 -71.240 -9.506 1.00 21.68 O
ATOM 11 C2' G A1273 38.751 -73.567 -10.052 1.00 25.95 C
ATOM 12 O2' G A1273 38.590 -73.791 -8.673 1.00 33.73 O
ATOM 13 C1' G A1273 37.405 -73.487 -10.770 1.00 27.73 C
ATOM 14 N9 G A1273 36.779 -74.780 -11.053 1.00 30.25 N
ATOM 15 C8 G A1273 37.372 -75.961 -11.393 1.00 37.59 C
ATOM 16 N7 G A1273 36.557 -76.972 -11.526 1.00 33.32 N
ATOM 17 C5 G A1273 35.334 -76.410 -11.235 1.00 31.81 C
ATOM 18 C6 G A1273 34.084 -77.030 -11.203 1.00 32.76 C
ATOM 19 O6 G A1273 33.825 -78.227 -11.450 1.00 34.96 O
ATOM 20 N1 G A1273 33.125 -76.101 -10.847 1.00 31.31 N
ATOM 21 C2 G A1273 33.346 -74.787 -10.563 1.00 31.39 C
ATOM 22 N2 G A1273 32.291 -74.043 -10.243 1.00 34.97 N
ATOM 23 N3 G A1273 34.507 -74.214 -10.604 1.00 32.41 N
ATOM 24 C4 G A1273 35.449 -75.078 -10.949 1.00 30.91 C
ATOM 25 P G A1274 39.524 -69.940 -9.001 1.00 18.47 P
ATOM 26 OP1 G A1274 38.812 -69.399 -7.785 1.00 25.82 O
ATOM 27 OP2 G A1274 39.672 -69.049 -10.184 1.00 27.55 O
ATOM 28 O5' G A1274 40.943 -70.511 -8.568 1.00 29.60 O
TER
ATOM 1 O3' C B1555 42.618 -66.635 -14.660 1.00 27.33 O
ATOM 2 P A B1556 41.108 -66.920 -15.097 1.00 22.73 P
ATOM 3 OP1 A B1556 40.953 -68.397 -15.177 1.00 29.91 O
ATOM 4 OP2 A B1556 40.842 -66.105 -16.313 1.00 30.59 O
ATOM 5 O5' A B1556 40.256 -66.342 -13.880 1.00 31.37 O
ATOM 6 C5' A B1556 39.887 -64.968 -13.829 1.00 22.22 C
ATOM 7 C4' A B1556 39.063 -64.660 -12.618 1.00 19.87 C
ATOM 8 O4' A B1556 37.984 -65.643 -12.504 1.00 24.33 O
ATOM 9 C3' A B1556 39.812 -64.710 -11.286 1.00 26.15 C
ATOM 10 O3' A B1556 39.354 -63.638 -10.447 1.00 33.27 O
ATOM 11 C2' A B1556 39.337 -66.050 -10.710 1.00 24.84 C
ATOM 12 O2' A B1556 39.469 -66.188 -9.308 1.00 29.70 O
ATOM 13 C1' A B1556 37.891 -66.008 -11.158 1.00 29.47 C
ATOM 14 N9 A B1556 37.122 -67.255 -10.977 1.00 33.13 N
ATOM 15 C8 A B1556 36.475 -67.560 -9.771 1.00 42.60 C
ATOM 16 N7 A B1556 35.832 -68.693 -9.652 1.00 22.25 N
ATOM 17 C5 A B1556 36.072 -69.172 -10.908 1.00 28.97 C
ATOM 18 C6 A B1556 35.658 -70.373 -11.430 1.00 32.66 C
ATOM 19 N6 A B1556 34.927 -71.237 -10.742 1.00 32.55 N
ATOM 20 N1 A B1556 36.020 -70.619 -12.710 1.00 48.86 N
ATOM 21 C2 A B1556 36.761 -69.694 -13.381 1.00 46.55 C
ATOM 22 N3 A B1556 37.218 -68.504 -12.975 1.00 32.24 N
ATOM 23 C4 A B1556 36.830 -68.321 -11.729 1.00 26.85 C
ATOM 24 P C B1557 40.301 -62.365 -10.172 1.00 29.23 P
ATOM 25 OP1 C B1557 39.674 -61.497 -9.144 1.00 30.30 O
ATOM 26 OP2 C B1557 40.602 -61.792 -11.497 1.00 30.40 O
ATOM 27 O5' C B1557 41.579 -63.040 -9.541 1.00 41.65 O
TER
Atoms:
OP1: (42.942,-72.728,-13.186)
OP2: (42.416,-75.211,-13.032)
C3': (39.325,-72.202,-10.381)
C1': (37.405,-73.487,-10.770)
C5': (39.818,-72.351,-12.897)
O6: (33.825,-78.227,-11.450)
O4': (37.667,-72.829,-11.974)
C8: (37.372,-75.961,-11.393)
C2: (33.346,-74.787,-10.563)
C6: (34.084,-77.030,-11.203)
C5: (35.334,-76.410,-11.235)
C4: (35.449,-75.078,-10.949)
P: (41.975,-73.821,-13.337)
C4': (38.836,-71.989,-11.819)
C2': (38.751,-73.567,-10.052)
O2': (38.590,-73.791,-8.673)
N1: (33.125,-76.101,-10.847)
N2: (32.291,-74.043,-10.243)
N3: (34.507,-74.214,-10.604)
N7: (36.557,-76.972,-11.526)
N9: (36.779,-74.780,-11.053)
O5': (40.629,-73.478,-12.534)
O3': (38.724,-71.240,-9.506)
OP2: (42.416,-75.211,-13.032)
C3': (39.325,-72.202,-10.381)
C1': (37.405,-73.487,-10.770)
C5': (39.818,-72.351,-12.897)
O6: (33.825,-78.227,-11.450)
O4': (37.667,-72.829,-11.974)
C8: (37.372,-75.961,-11.393)
C2: (33.346,-74.787,-10.563)
C6: (34.084,-77.030,-11.203)
C5: (35.334,-76.410,-11.235)
C4: (35.449,-75.078,-10.949)
P: (41.975,-73.821,-13.337)
C4': (38.836,-71.989,-11.819)
C2': (38.751,-73.567,-10.052)
O2': (38.590,-73.791,-8.673)
N1: (33.125,-76.101,-10.847)
N2: (32.291,-74.043,-10.243)
N3: (34.507,-74.214,-10.604)
N7: (36.557,-76.972,-11.526)
N9: (36.779,-74.780,-11.053)
O5': (40.629,-73.478,-12.534)
O3': (38.724,-71.240,-9.506)
OP1: (40.953,-68.397,-15.177)
OP2: (40.842,-66.105,-16.313)
C3': (39.812,-64.710,-11.286)
C1': (37.891,-66.008,-11.158)
C5': (39.887,-64.968,-13.829)
O4': (37.984,-65.643,-12.504)
C8: (36.475,-67.560,-9.771)
O2': (39.469,-66.188,-9.308)
C6: (35.658,-70.373,-11.430)
C5: (36.072,-69.172,-10.908)
C4: (36.830,-68.321,-11.729)
P: (41.108,-66.920,-15.097)
C4': (39.063,-64.660,-12.618)
C2': (39.337,-66.050,-10.710)
C2: (36.761,-69.694,-13.381)
N1: (36.020,-70.619,-12.710)
N3: (37.218,-68.504,-12.975)
N6: (34.927,-71.237,-10.742)
N7: (35.832,-68.693,-9.652)
N9: (37.122,-67.255,-10.977)
O5': (40.256,-66.342,-13.880)
O3': (39.354,-63.638,-10.447)
OP2: (40.842,-66.105,-16.313)
C3': (39.812,-64.710,-11.286)
C1': (37.891,-66.008,-11.158)
C5': (39.887,-64.968,-13.829)
O4': (37.984,-65.643,-12.504)
C8: (36.475,-67.560,-9.771)
O2': (39.469,-66.188,-9.308)
C6: (35.658,-70.373,-11.430)
C5: (36.072,-69.172,-10.908)
C4: (36.830,-68.321,-11.729)
P: (41.108,-66.920,-15.097)
C4': (39.063,-64.660,-12.618)
C2': (39.337,-66.050,-10.710)
C2: (36.761,-69.694,-13.381)
N1: (36.020,-70.619,-12.710)
N3: (37.218,-68.504,-12.975)
N6: (34.927,-71.237,-10.742)
N7: (35.832,-68.693,-9.652)
N9: (37.122,-67.255,-10.977)
O5': (40.256,-66.342,-13.880)
O3': (39.354,-63.638,-10.447)
Image (generated by PyMOL):