Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A389:A371
Extra
PDB:
ATOM 1 O3' U A 388 -62.112 12.316 -83.076 1.00 14.21 O
ATOM 2 P G A 389 -63.530 12.841 -83.636 1.00 25.09 P
ATOM 3 OP1 G A 389 -63.532 14.313 -83.478 1.00 25.09 O
ATOM 4 OP2 G A 389 -64.606 12.038 -82.976 1.00 25.09 O
ATOM 5 O5' G A 389 -63.464 12.462 -85.167 1.00 25.09 O
ATOM 6 C5' G A 389 -63.635 13.434 -86.165 1.00 25.09 C
ATOM 7 C4' G A 389 -64.200 12.807 -87.392 1.00 25.09 C
ATOM 8 O4' G A 389 -63.734 11.435 -87.478 1.00 25.09 O
ATOM 9 C3' G A 389 -65.703 12.685 -87.409 1.00 25.09 C
ATOM 10 O3' G A 389 -66.333 13.867 -87.830 1.00 25.09 O
ATOM 11 C2' G A 389 -65.949 11.506 -88.335 1.00 25.09 C
ATOM 12 O2' G A 389 -65.884 11.921 -89.699 1.00 25.09 O
ATOM 13 C1' G A 389 -64.742 10.612 -88.027 1.00 25.09 C
ATOM 14 N9 G A 389 -65.045 9.523 -87.061 1.00 24.39 N
ATOM 15 C8 G A 389 -64.676 9.481 -85.739 1.00 24.39 C
ATOM 16 N7 G A 389 -65.031 8.388 -85.135 1.00 24.39 N
ATOM 17 C5 G A 389 -65.668 7.642 -86.109 1.00 24.39 C
ATOM 18 C6 G A 389 -66.273 6.349 -86.049 1.00 24.39 C
ATOM 19 O6 G A 389 -66.375 5.579 -85.086 1.00 24.39 O
ATOM 20 N1 G A 389 -66.809 5.955 -87.273 1.00 24.39 N
ATOM 21 C2 G A 389 -66.757 6.712 -88.401 1.00 24.39 C
ATOM 22 N2 G A 389 -67.334 6.172 -89.480 1.00 24.39 N
ATOM 23 N3 G A 389 -66.191 7.911 -88.464 1.00 24.39 N
ATOM 24 C4 G A 389 -65.669 8.323 -87.300 1.00 24.39 C
ATOM 25 P C A 390 -67.621 14.365 -87.047 1.00 24.45 P
ATOM 26 OP1 C A 390 -67.722 15.830 -87.254 1.00 24.45 O
ATOM 27 OP2 C A 390 -67.494 13.845 -85.660 1.00 24.45 O
ATOM 28 O5' C A 390 -68.808 13.614 -87.805 1.00 24.45 O
TER
ATOM 1 O3' C B 370 -60.388 5.323 -95.950 1.00 44.25 O
ATOM 2 P A B 371 -61.071 5.310 -97.403 1.00 25.76 P
ATOM 3 OP1 A B 371 -62.511 4.975 -97.220 1.00 25.76 O
ATOM 4 OP2 A B 371 -60.248 4.438 -98.281 1.00 25.76 O
ATOM 5 O5' A B 371 -60.903 6.845 -97.827 1.00 25.76 O
ATOM 6 C5' A B 371 -61.697 7.425 -98.845 1.00 25.76 C
ATOM 7 C4' A B 371 -62.139 8.818 -98.476 1.00 25.76 C
ATOM 8 O4' A B 371 -63.475 8.775 -97.931 1.00 25.76 O
ATOM 9 C3' A B 371 -61.308 9.523 -97.413 1.00 25.76 C
ATOM 10 O3' A B 371 -60.171 10.164 -97.954 1.00 25.76 O
ATOM 11 C2' A B 371 -62.294 10.498 -96.807 1.00 25.76 C
ATOM 12 O2' A B 371 -62.368 11.678 -97.584 1.00 25.76 O
ATOM 13 C1' A B 371 -63.613 9.745 -96.928 1.00 25.76 C
ATOM 14 N9 A B 371 -63.984 9.074 -95.671 1.00 26.03 N
ATOM 15 C8 A B 371 -64.088 7.726 -95.403 1.00 26.03 C
ATOM 16 N7 A B 371 -64.471 7.482 -94.164 1.00 26.03 N
ATOM 17 C5 A B 371 -64.646 8.746 -93.582 1.00 26.03 C
ATOM 18 C6 A B 371 -65.046 9.195 -92.302 1.00 26.03 C
ATOM 19 N6 A B 371 -65.360 8.389 -91.295 1.00 26.03 N
ATOM 20 N1 A B 371 -65.117 10.520 -92.064 1.00 26.03 N
ATOM 21 C2 A B 371 -64.800 11.345 -93.056 1.00 26.03 C
ATOM 22 N3 A B 371 -64.414 11.062 -94.300 1.00 26.03 N
ATOM 23 C4 A B 371 -64.349 9.732 -94.507 1.00 26.03 C
ATOM 24 P A B 372 -59.232 11.079 -97.025 1.00 29.77 P
ATOM 25 OP1 A B 372 -58.392 11.893 -97.923 1.00 29.77 O
ATOM 26 OP2 A B 372 -58.559 10.159 -96.067 1.00 29.77 O
ATOM 27 O5' A B 372 -60.264 12.019 -96.243 1.00 29.77 O
TER
ATOM 2 P G A 389 -63.530 12.841 -83.636 1.00 25.09 P
ATOM 3 OP1 G A 389 -63.532 14.313 -83.478 1.00 25.09 O
ATOM 4 OP2 G A 389 -64.606 12.038 -82.976 1.00 25.09 O
ATOM 5 O5' G A 389 -63.464 12.462 -85.167 1.00 25.09 O
ATOM 6 C5' G A 389 -63.635 13.434 -86.165 1.00 25.09 C
ATOM 7 C4' G A 389 -64.200 12.807 -87.392 1.00 25.09 C
ATOM 8 O4' G A 389 -63.734 11.435 -87.478 1.00 25.09 O
ATOM 9 C3' G A 389 -65.703 12.685 -87.409 1.00 25.09 C
ATOM 10 O3' G A 389 -66.333 13.867 -87.830 1.00 25.09 O
ATOM 11 C2' G A 389 -65.949 11.506 -88.335 1.00 25.09 C
ATOM 12 O2' G A 389 -65.884 11.921 -89.699 1.00 25.09 O
ATOM 13 C1' G A 389 -64.742 10.612 -88.027 1.00 25.09 C
ATOM 14 N9 G A 389 -65.045 9.523 -87.061 1.00 24.39 N
ATOM 15 C8 G A 389 -64.676 9.481 -85.739 1.00 24.39 C
ATOM 16 N7 G A 389 -65.031 8.388 -85.135 1.00 24.39 N
ATOM 17 C5 G A 389 -65.668 7.642 -86.109 1.00 24.39 C
ATOM 18 C6 G A 389 -66.273 6.349 -86.049 1.00 24.39 C
ATOM 19 O6 G A 389 -66.375 5.579 -85.086 1.00 24.39 O
ATOM 20 N1 G A 389 -66.809 5.955 -87.273 1.00 24.39 N
ATOM 21 C2 G A 389 -66.757 6.712 -88.401 1.00 24.39 C
ATOM 22 N2 G A 389 -67.334 6.172 -89.480 1.00 24.39 N
ATOM 23 N3 G A 389 -66.191 7.911 -88.464 1.00 24.39 N
ATOM 24 C4 G A 389 -65.669 8.323 -87.300 1.00 24.39 C
ATOM 25 P C A 390 -67.621 14.365 -87.047 1.00 24.45 P
ATOM 26 OP1 C A 390 -67.722 15.830 -87.254 1.00 24.45 O
ATOM 27 OP2 C A 390 -67.494 13.845 -85.660 1.00 24.45 O
ATOM 28 O5' C A 390 -68.808 13.614 -87.805 1.00 24.45 O
TER
ATOM 1 O3' C B 370 -60.388 5.323 -95.950 1.00 44.25 O
ATOM 2 P A B 371 -61.071 5.310 -97.403 1.00 25.76 P
ATOM 3 OP1 A B 371 -62.511 4.975 -97.220 1.00 25.76 O
ATOM 4 OP2 A B 371 -60.248 4.438 -98.281 1.00 25.76 O
ATOM 5 O5' A B 371 -60.903 6.845 -97.827 1.00 25.76 O
ATOM 6 C5' A B 371 -61.697 7.425 -98.845 1.00 25.76 C
ATOM 7 C4' A B 371 -62.139 8.818 -98.476 1.00 25.76 C
ATOM 8 O4' A B 371 -63.475 8.775 -97.931 1.00 25.76 O
ATOM 9 C3' A B 371 -61.308 9.523 -97.413 1.00 25.76 C
ATOM 10 O3' A B 371 -60.171 10.164 -97.954 1.00 25.76 O
ATOM 11 C2' A B 371 -62.294 10.498 -96.807 1.00 25.76 C
ATOM 12 O2' A B 371 -62.368 11.678 -97.584 1.00 25.76 O
ATOM 13 C1' A B 371 -63.613 9.745 -96.928 1.00 25.76 C
ATOM 14 N9 A B 371 -63.984 9.074 -95.671 1.00 26.03 N
ATOM 15 C8 A B 371 -64.088 7.726 -95.403 1.00 26.03 C
ATOM 16 N7 A B 371 -64.471 7.482 -94.164 1.00 26.03 N
ATOM 17 C5 A B 371 -64.646 8.746 -93.582 1.00 26.03 C
ATOM 18 C6 A B 371 -65.046 9.195 -92.302 1.00 26.03 C
ATOM 19 N6 A B 371 -65.360 8.389 -91.295 1.00 26.03 N
ATOM 20 N1 A B 371 -65.117 10.520 -92.064 1.00 26.03 N
ATOM 21 C2 A B 371 -64.800 11.345 -93.056 1.00 26.03 C
ATOM 22 N3 A B 371 -64.414 11.062 -94.300 1.00 26.03 N
ATOM 23 C4 A B 371 -64.349 9.732 -94.507 1.00 26.03 C
ATOM 24 P A B 372 -59.232 11.079 -97.025 1.00 29.77 P
ATOM 25 OP1 A B 372 -58.392 11.893 -97.923 1.00 29.77 O
ATOM 26 OP2 A B 372 -58.559 10.159 -96.067 1.00 29.77 O
ATOM 27 O5' A B 372 -60.264 12.019 -96.243 1.00 29.77 O
TER
Atoms:
OP1: (-63.532,14.313,-83.478)
OP2: (-64.606,12.038,-82.976)
C3': (-65.703,12.685,-87.409)
C1': (-64.742,10.612,-88.027)
C5': (-63.635,13.434,-86.165)
O6: (-66.375,5.579,-85.086)
O4': (-63.734,11.435,-87.478)
C8: (-64.676,9.481,-85.739)
C2: (-66.757,6.712,-88.401)
C6: (-66.273,6.349,-86.049)
C5: (-65.668,7.642,-86.109)
C4: (-65.669,8.323,-87.300)
P: (-63.530,12.841,-83.636)
C4': (-64.200,12.807,-87.392)
C2': (-65.949,11.506,-88.335)
O2': (-65.884,11.921,-89.699)
N1: (-66.809,5.955,-87.273)
N2: (-67.334,6.172,-89.480)
N3: (-66.191,7.911,-88.464)
N7: (-65.031,8.388,-85.135)
N9: (-65.045,9.523,-87.061)
O5': (-63.464,12.462,-85.167)
O3': (-66.333,13.867,-87.830)
OP2: (-64.606,12.038,-82.976)
C3': (-65.703,12.685,-87.409)
C1': (-64.742,10.612,-88.027)
C5': (-63.635,13.434,-86.165)
O6: (-66.375,5.579,-85.086)
O4': (-63.734,11.435,-87.478)
C8: (-64.676,9.481,-85.739)
C2: (-66.757,6.712,-88.401)
C6: (-66.273,6.349,-86.049)
C5: (-65.668,7.642,-86.109)
C4: (-65.669,8.323,-87.300)
P: (-63.530,12.841,-83.636)
C4': (-64.200,12.807,-87.392)
C2': (-65.949,11.506,-88.335)
O2': (-65.884,11.921,-89.699)
N1: (-66.809,5.955,-87.273)
N2: (-67.334,6.172,-89.480)
N3: (-66.191,7.911,-88.464)
N7: (-65.031,8.388,-85.135)
N9: (-65.045,9.523,-87.061)
O5': (-63.464,12.462,-85.167)
O3': (-66.333,13.867,-87.830)
OP1: (-62.511,4.975,-97.220)
OP2: (-60.248,4.438,-98.281)
C3': (-61.308,9.523,-97.413)
C1': (-63.613,9.745,-96.928)
C5': (-61.697,7.425,-98.845)
O4': (-63.475,8.775,-97.931)
C8: (-64.088,7.726,-95.403)
O2': (-62.368,11.678,-97.584)
C6: (-65.046,9.195,-92.302)
C5: (-64.646,8.746,-93.582)
C4: (-64.349,9.732,-94.507)
P: (-61.071,5.310,-97.403)
C4': (-62.139,8.818,-98.476)
C2': (-62.294,10.498,-96.807)
C2: (-64.800,11.345,-93.056)
N1: (-65.117,10.520,-92.064)
N3: (-64.414,11.062,-94.300)
N6: (-65.360,8.389,-91.295)
N7: (-64.471,7.482,-94.164)
N9: (-63.984,9.074,-95.671)
O5': (-60.903,6.845,-97.827)
O3': (-60.171,10.164,-97.954)
OP2: (-60.248,4.438,-98.281)
C3': (-61.308,9.523,-97.413)
C1': (-63.613,9.745,-96.928)
C5': (-61.697,7.425,-98.845)
O4': (-63.475,8.775,-97.931)
C8: (-64.088,7.726,-95.403)
O2': (-62.368,11.678,-97.584)
C6: (-65.046,9.195,-92.302)
C5: (-64.646,8.746,-93.582)
C4: (-64.349,9.732,-94.507)
P: (-61.071,5.310,-97.403)
C4': (-62.139,8.818,-98.476)
C2': (-62.294,10.498,-96.807)
C2: (-64.800,11.345,-93.056)
N1: (-65.117,10.520,-92.064)
N3: (-64.414,11.062,-94.300)
N6: (-65.360,8.389,-91.295)
N7: (-64.471,7.482,-94.164)
N9: (-63.984,9.074,-95.671)
O5': (-60.903,6.845,-97.827)
O3': (-60.171,10.164,-97.954)
Image (generated by PyMOL):