Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A389:A371
Extra
PDB:
ATOM 1 O3' U A 388 -20.083 30.175 102.562 1.00 14.22 O
ATOM 2 P G A 389 -21.375 30.429 101.612 1.00 22.07 P
ATOM 3 OP1 G A 389 -20.860 30.708 100.262 1.00 22.07 O
ATOM 4 OP2 G A 389 -22.229 31.447 102.262 1.00 22.07 O
ATOM 5 O5' G A 389 -22.121 29.026 101.629 1.00 22.07 O
ATOM 6 C5' G A 389 -21.450 27.844 101.249 1.00 22.07 C
ATOM 7 C4' G A 389 -22.224 26.636 101.668 1.00 22.07 C
ATOM 8 O4' G A 389 -22.189 26.514 103.106 1.00 22.07 O
ATOM 9 C3' G A 389 -23.701 26.667 101.323 1.00 22.07 C
ATOM 10 O3' G A 389 -23.958 26.226 100.011 1.00 22.07 O
ATOM 11 C2' G A 389 -24.329 25.771 102.365 1.00 22.07 C
ATOM 12 O2' G A 389 -24.257 24.412 101.948 1.00 22.07 O
ATOM 13 C1' G A 389 -23.410 25.985 103.573 1.00 22.07 C
ATOM 14 N9 G A 389 -23.986 26.918 104.566 1.00 21.68 N
ATOM 15 C8 G A 389 -23.565 28.195 104.810 1.00 21.68 C
ATOM 16 N7 G A 389 -24.240 28.773 105.750 1.00 21.68 N
ATOM 17 C5 G A 389 -25.166 27.826 106.162 1.00 21.68 C
ATOM 18 C6 G A 389 -26.178 27.874 107.171 1.00 21.68 C
ATOM 19 O6 G A 389 -26.486 28.791 107.941 1.00 21.68 O
ATOM 20 N1 G A 389 -26.898 26.696 107.266 1.00 21.68 N
ATOM 21 C2 G A 389 -26.665 25.604 106.496 1.00 21.68 C
ATOM 22 N2 G A 389 -27.473 24.577 106.757 1.00 21.68 N
ATOM 23 N3 G A 389 -25.731 25.536 105.555 1.00 21.68 N
ATOM 24 C4 G A 389 -25.017 26.672 105.441 1.00 21.68 C
ATOM 25 P C A 390 -25.108 26.925 99.160 1.00 9.81 P
ATOM 26 OP1 C A 390 -24.820 26.645 97.726 1.00 9.81 O
ATOM 27 OP2 C A 390 -25.166 28.329 99.626 1.00 9.81 O
ATOM 28 O5' C A 390 -26.421 26.161 99.614 1.00 9.81 O
TER
ATOM 1 O3' C B 370 -20.506 18.520 109.739 1.00 22.31 O
ATOM 2 P A B 371 -20.603 16.902 109.740 1.00 18.19 P
ATOM 3 OP1 A B 371 -21.953 16.536 110.278 1.00 18.19 O
ATOM 4 OP2 A B 371 -19.385 16.387 110.428 1.00 18.19 O
ATOM 5 O5' A B 371 -20.526 16.561 108.180 1.00 18.19 O
ATOM 6 C5' A B 371 -21.420 15.634 107.581 1.00 18.19 C
ATOM 7 C4' A B 371 -21.434 15.774 106.077 1.00 18.19 C
ATOM 8 O4' A B 371 -22.717 16.307 105.655 1.00 18.19 O
ATOM 9 C3' A B 371 -20.421 16.740 105.496 1.00 18.19 C
ATOM 10 O3' A B 371 -19.154 16.167 105.287 1.00 18.19 O
ATOM 11 C2' A B 371 -21.080 17.195 104.216 1.00 18.19 C
ATOM 12 O2' A B 371 -20.950 16.206 103.221 1.00 18.19 O
ATOM 13 C1' A B 371 -22.535 17.266 104.642 1.00 18.19 C
ATOM 14 N9 A B 371 -22.880 18.594 105.191 1.00 18.69 N
ATOM 15 C8 A B 371 -23.210 18.860 106.487 1.00 18.69 C
ATOM 16 N7 A B 371 -23.477 20.122 106.714 1.00 18.69 N
ATOM 17 C5 A B 371 -23.308 20.743 105.489 1.00 18.69 C
ATOM 18 C6 A B 371 -23.437 22.076 105.077 1.00 18.69 C
ATOM 19 N6 A B 371 -23.779 23.083 105.880 1.00 18.69 N
ATOM 20 N1 A B 371 -23.199 22.361 103.790 1.00 18.69 N
ATOM 21 C2 A B 371 -22.865 21.374 102.970 1.00 18.69 C
ATOM 22 N3 A B 371 -22.709 20.090 103.249 1.00 18.69 N
ATOM 23 C4 A B 371 -22.945 19.817 104.542 1.00 18.69 C
ATOM 24 P A B 372 -17.914 17.135 104.951 1.00 13.84 P
ATOM 25 OP1 A B 372 -16.762 16.285 104.576 1.00 13.84 O
ATOM 26 OP2 A B 372 -17.769 18.071 106.102 1.00 13.84 O
ATOM 27 O5' A B 372 -18.434 17.941 103.694 1.00 13.84 O
TER
ATOM 2 P G A 389 -21.375 30.429 101.612 1.00 22.07 P
ATOM 3 OP1 G A 389 -20.860 30.708 100.262 1.00 22.07 O
ATOM 4 OP2 G A 389 -22.229 31.447 102.262 1.00 22.07 O
ATOM 5 O5' G A 389 -22.121 29.026 101.629 1.00 22.07 O
ATOM 6 C5' G A 389 -21.450 27.844 101.249 1.00 22.07 C
ATOM 7 C4' G A 389 -22.224 26.636 101.668 1.00 22.07 C
ATOM 8 O4' G A 389 -22.189 26.514 103.106 1.00 22.07 O
ATOM 9 C3' G A 389 -23.701 26.667 101.323 1.00 22.07 C
ATOM 10 O3' G A 389 -23.958 26.226 100.011 1.00 22.07 O
ATOM 11 C2' G A 389 -24.329 25.771 102.365 1.00 22.07 C
ATOM 12 O2' G A 389 -24.257 24.412 101.948 1.00 22.07 O
ATOM 13 C1' G A 389 -23.410 25.985 103.573 1.00 22.07 C
ATOM 14 N9 G A 389 -23.986 26.918 104.566 1.00 21.68 N
ATOM 15 C8 G A 389 -23.565 28.195 104.810 1.00 21.68 C
ATOM 16 N7 G A 389 -24.240 28.773 105.750 1.00 21.68 N
ATOM 17 C5 G A 389 -25.166 27.826 106.162 1.00 21.68 C
ATOM 18 C6 G A 389 -26.178 27.874 107.171 1.00 21.68 C
ATOM 19 O6 G A 389 -26.486 28.791 107.941 1.00 21.68 O
ATOM 20 N1 G A 389 -26.898 26.696 107.266 1.00 21.68 N
ATOM 21 C2 G A 389 -26.665 25.604 106.496 1.00 21.68 C
ATOM 22 N2 G A 389 -27.473 24.577 106.757 1.00 21.68 N
ATOM 23 N3 G A 389 -25.731 25.536 105.555 1.00 21.68 N
ATOM 24 C4 G A 389 -25.017 26.672 105.441 1.00 21.68 C
ATOM 25 P C A 390 -25.108 26.925 99.160 1.00 9.81 P
ATOM 26 OP1 C A 390 -24.820 26.645 97.726 1.00 9.81 O
ATOM 27 OP2 C A 390 -25.166 28.329 99.626 1.00 9.81 O
ATOM 28 O5' C A 390 -26.421 26.161 99.614 1.00 9.81 O
TER
ATOM 1 O3' C B 370 -20.506 18.520 109.739 1.00 22.31 O
ATOM 2 P A B 371 -20.603 16.902 109.740 1.00 18.19 P
ATOM 3 OP1 A B 371 -21.953 16.536 110.278 1.00 18.19 O
ATOM 4 OP2 A B 371 -19.385 16.387 110.428 1.00 18.19 O
ATOM 5 O5' A B 371 -20.526 16.561 108.180 1.00 18.19 O
ATOM 6 C5' A B 371 -21.420 15.634 107.581 1.00 18.19 C
ATOM 7 C4' A B 371 -21.434 15.774 106.077 1.00 18.19 C
ATOM 8 O4' A B 371 -22.717 16.307 105.655 1.00 18.19 O
ATOM 9 C3' A B 371 -20.421 16.740 105.496 1.00 18.19 C
ATOM 10 O3' A B 371 -19.154 16.167 105.287 1.00 18.19 O
ATOM 11 C2' A B 371 -21.080 17.195 104.216 1.00 18.19 C
ATOM 12 O2' A B 371 -20.950 16.206 103.221 1.00 18.19 O
ATOM 13 C1' A B 371 -22.535 17.266 104.642 1.00 18.19 C
ATOM 14 N9 A B 371 -22.880 18.594 105.191 1.00 18.69 N
ATOM 15 C8 A B 371 -23.210 18.860 106.487 1.00 18.69 C
ATOM 16 N7 A B 371 -23.477 20.122 106.714 1.00 18.69 N
ATOM 17 C5 A B 371 -23.308 20.743 105.489 1.00 18.69 C
ATOM 18 C6 A B 371 -23.437 22.076 105.077 1.00 18.69 C
ATOM 19 N6 A B 371 -23.779 23.083 105.880 1.00 18.69 N
ATOM 20 N1 A B 371 -23.199 22.361 103.790 1.00 18.69 N
ATOM 21 C2 A B 371 -22.865 21.374 102.970 1.00 18.69 C
ATOM 22 N3 A B 371 -22.709 20.090 103.249 1.00 18.69 N
ATOM 23 C4 A B 371 -22.945 19.817 104.542 1.00 18.69 C
ATOM 24 P A B 372 -17.914 17.135 104.951 1.00 13.84 P
ATOM 25 OP1 A B 372 -16.762 16.285 104.576 1.00 13.84 O
ATOM 26 OP2 A B 372 -17.769 18.071 106.102 1.00 13.84 O
ATOM 27 O5' A B 372 -18.434 17.941 103.694 1.00 13.84 O
TER
Atoms:
OP1: (-20.860,30.708,100.262)
OP2: (-22.229,31.447,102.262)
C3': (-23.701,26.667,101.323)
C1': (-23.410,25.985,103.573)
C5': (-21.450,27.844,101.249)
O6: (-26.486,28.791,107.941)
O4': (-22.189,26.514,103.106)
C8: (-23.565,28.195,104.810)
C2: (-26.665,25.604,106.496)
C6: (-26.178,27.874,107.171)
C5: (-25.166,27.826,106.162)
C4: (-25.017,26.672,105.441)
P: (-21.375,30.429,101.612)
C4': (-22.224,26.636,101.668)
C2': (-24.329,25.771,102.365)
O2': (-24.257,24.412,101.948)
N1: (-26.898,26.696,107.266)
N2: (-27.473,24.577,106.757)
N3: (-25.731,25.536,105.555)
N7: (-24.240,28.773,105.750)
N9: (-23.986,26.918,104.566)
O5': (-22.121,29.026,101.629)
O3': (-23.958,26.226,100.011)
OP2: (-22.229,31.447,102.262)
C3': (-23.701,26.667,101.323)
C1': (-23.410,25.985,103.573)
C5': (-21.450,27.844,101.249)
O6: (-26.486,28.791,107.941)
O4': (-22.189,26.514,103.106)
C8: (-23.565,28.195,104.810)
C2: (-26.665,25.604,106.496)
C6: (-26.178,27.874,107.171)
C5: (-25.166,27.826,106.162)
C4: (-25.017,26.672,105.441)
P: (-21.375,30.429,101.612)
C4': (-22.224,26.636,101.668)
C2': (-24.329,25.771,102.365)
O2': (-24.257,24.412,101.948)
N1: (-26.898,26.696,107.266)
N2: (-27.473,24.577,106.757)
N3: (-25.731,25.536,105.555)
N7: (-24.240,28.773,105.750)
N9: (-23.986,26.918,104.566)
O5': (-22.121,29.026,101.629)
O3': (-23.958,26.226,100.011)
OP1: (-21.953,16.536,110.278)
OP2: (-19.385,16.387,110.428)
C3': (-20.421,16.740,105.496)
C1': (-22.535,17.266,104.642)
C5': (-21.420,15.634,107.581)
O4': (-22.717,16.307,105.655)
C8: (-23.210,18.860,106.487)
O2': (-20.950,16.206,103.221)
C6: (-23.437,22.076,105.077)
C5: (-23.308,20.743,105.489)
C4: (-22.945,19.817,104.542)
P: (-20.603,16.902,109.740)
C4': (-21.434,15.774,106.077)
C2': (-21.080,17.195,104.216)
C2: (-22.865,21.374,102.970)
N1: (-23.199,22.361,103.790)
N3: (-22.709,20.090,103.249)
N6: (-23.779,23.083,105.880)
N7: (-23.477,20.122,106.714)
N9: (-22.880,18.594,105.191)
O5': (-20.526,16.561,108.180)
O3': (-19.154,16.167,105.287)
OP2: (-19.385,16.387,110.428)
C3': (-20.421,16.740,105.496)
C1': (-22.535,17.266,104.642)
C5': (-21.420,15.634,107.581)
O4': (-22.717,16.307,105.655)
C8: (-23.210,18.860,106.487)
O2': (-20.950,16.206,103.221)
C6: (-23.437,22.076,105.077)
C5: (-23.308,20.743,105.489)
C4: (-22.945,19.817,104.542)
P: (-20.603,16.902,109.740)
C4': (-21.434,15.774,106.077)
C2': (-21.080,17.195,104.216)
C2: (-22.865,21.374,102.970)
N1: (-23.199,22.361,103.790)
N3: (-22.709,20.090,103.249)
N6: (-23.779,23.083,105.880)
N7: (-23.477,20.122,106.714)
N9: (-22.880,18.594,105.191)
O5': (-20.526,16.561,108.180)
O3': (-19.154,16.167,105.287)
Image (generated by PyMOL):