Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A47:A48
Extra
PDB:
ATOM 1 O3' C A 46 -35.860 -61.319 65.700 1.00 0.26 O
ATOM 2 P G A 47 -35.212 -60.357 66.782 1.00 0.01 P
ATOM 3 OP1 G A 47 -33.824 -60.844 67.031 1.00 0.01 O
ATOM 4 OP2 G A 47 -36.165 -60.278 67.905 1.00 0.01 O
ATOM 5 O5' G A 47 -35.188 -58.981 66.020 1.00 0.01 O
ATOM 6 C5' G A 47 -34.795 -58.949 64.682 1.00 0.01 C
ATOM 7 C4' G A 47 -34.703 -57.556 64.167 1.00 0.01 C
ATOM 8 O4' G A 47 -35.968 -57.146 63.627 1.00 0.01 O
ATOM 9 C3' G A 47 -34.407 -56.475 65.164 1.00 0.01 C
ATOM 10 O3' G A 47 -33.068 -56.476 65.615 1.00 0.01 O
ATOM 11 C2' G A 47 -34.760 -55.273 64.335 1.00 0.01 C
ATOM 12 O2' G A 47 -33.824 -55.137 63.275 1.00 0.01 O
ATOM 13 C1' G A 47 -36.073 -55.753 63.738 1.00 0.01 C
ATOM 14 N9 G A 47 -37.214 -55.456 64.606 1.00 0.01 N
ATOM 15 C8 G A 47 -37.764 -56.385 65.448 1.00 0.01 C
ATOM 16 N7 G A 47 -38.773 -55.909 66.116 1.00 0.01 N
ATOM 17 C5 G A 47 -38.883 -54.604 65.683 1.00 0.01 C
ATOM 18 C6 G A 47 -39.804 -53.622 66.088 1.00 0.01 C
ATOM 19 O6 G A 47 -40.689 -53.787 66.922 1.00 0.01 O
ATOM 20 N1 G A 47 -39.626 -52.393 65.440 1.00 0.01 N
ATOM 21 C2 G A 47 -38.657 -52.163 64.496 1.00 0.01 C
ATOM 22 N2 G A 47 -38.654 -50.927 63.980 1.00 0.01 N
ATOM 23 N3 G A 47 -37.774 -53.096 64.106 1.00 0.01 N
ATOM 24 C4 G A 47 -37.941 -54.290 64.735 1.00 0.01 C
ATOM 25 P A A 48 -32.676 -55.719 66.985 1.00 7.91 P
ATOM 26 OP1 A A 48 -32.222 -56.756 67.934 1.00 7.91 O
ATOM 27 OP2 A A 48 -33.828 -54.856 67.365 1.00 7.91 O
ATOM 28 O5' A A 48 -31.456 -54.811 66.547 1.00 7.91 O
TER
ATOM 1 O3' G B 47 -33.068 -56.476 65.615 1.00 0.01 O
ATOM 2 P A B 48 -32.676 -55.719 66.985 1.00 7.91 P
ATOM 3 OP1 A B 48 -32.222 -56.756 67.934 1.00 7.91 O
ATOM 4 OP2 A B 48 -33.828 -54.856 67.365 1.00 7.91 O
ATOM 5 O5' A B 48 -31.456 -54.811 66.547 1.00 7.91 O
ATOM 6 C5' A B 48 -31.656 -53.788 65.612 1.00 7.91 C
ATOM 7 C4' A B 48 -30.542 -52.806 65.639 1.00 7.91 C
ATOM 8 O4' A B 48 -30.712 -51.879 64.545 1.00 7.91 O
ATOM 9 C3' A B 48 -30.456 -51.951 66.891 1.00 7.91 C
ATOM 10 O3' A B 48 -29.105 -51.554 67.076 1.00 7.91 O
ATOM 11 C2' A B 48 -31.265 -50.734 66.511 1.00 7.91 C
ATOM 12 O2' A B 48 -30.952 -49.590 67.257 1.00 7.91 O
ATOM 13 C1' A B 48 -30.866 -50.570 65.052 1.00 7.91 C
ATOM 14 N9 A B 48 -31.860 -49.893 64.231 1.00 7.90 N
ATOM 15 C8 A B 48 -31.652 -48.863 63.362 1.00 7.90 C
ATOM 16 N7 A B 48 -32.729 -48.474 62.748 1.00 7.90 N
ATOM 17 C5 A B 48 -33.694 -49.314 63.240 1.00 7.90 C
ATOM 18 C6 A B 48 -35.044 -49.392 62.956 1.00 7.90 C
ATOM 19 N6 A B 48 -35.637 -48.578 62.087 1.00 7.90 N
ATOM 20 N1 A B 48 -35.739 -50.349 63.597 1.00 7.90 N
ATOM 21 C2 A B 48 -35.099 -51.150 64.456 1.00 7.90 C
ATOM 22 N3 A B 48 -33.828 -51.165 64.810 1.00 7.90 N
ATOM 23 C4 A B 48 -33.180 -50.205 64.150 1.00 7.90 C
ATOM 24 P U B 49 -28.442 -51.623 68.512 1.00 17.73 P
ATOM 25 OP1 U B 49 -29.551 -51.570 69.493 1.00 17.73 O
ATOM 26 OP2 U B 49 -27.400 -50.583 68.542 1.00 17.73 O
ATOM 27 O5' U B 49 -27.774 -53.063 68.541 1.00 17.73 O
TER
ATOM 2 P G A 47 -35.212 -60.357 66.782 1.00 0.01 P
ATOM 3 OP1 G A 47 -33.824 -60.844 67.031 1.00 0.01 O
ATOM 4 OP2 G A 47 -36.165 -60.278 67.905 1.00 0.01 O
ATOM 5 O5' G A 47 -35.188 -58.981 66.020 1.00 0.01 O
ATOM 6 C5' G A 47 -34.795 -58.949 64.682 1.00 0.01 C
ATOM 7 C4' G A 47 -34.703 -57.556 64.167 1.00 0.01 C
ATOM 8 O4' G A 47 -35.968 -57.146 63.627 1.00 0.01 O
ATOM 9 C3' G A 47 -34.407 -56.475 65.164 1.00 0.01 C
ATOM 10 O3' G A 47 -33.068 -56.476 65.615 1.00 0.01 O
ATOM 11 C2' G A 47 -34.760 -55.273 64.335 1.00 0.01 C
ATOM 12 O2' G A 47 -33.824 -55.137 63.275 1.00 0.01 O
ATOM 13 C1' G A 47 -36.073 -55.753 63.738 1.00 0.01 C
ATOM 14 N9 G A 47 -37.214 -55.456 64.606 1.00 0.01 N
ATOM 15 C8 G A 47 -37.764 -56.385 65.448 1.00 0.01 C
ATOM 16 N7 G A 47 -38.773 -55.909 66.116 1.00 0.01 N
ATOM 17 C5 G A 47 -38.883 -54.604 65.683 1.00 0.01 C
ATOM 18 C6 G A 47 -39.804 -53.622 66.088 1.00 0.01 C
ATOM 19 O6 G A 47 -40.689 -53.787 66.922 1.00 0.01 O
ATOM 20 N1 G A 47 -39.626 -52.393 65.440 1.00 0.01 N
ATOM 21 C2 G A 47 -38.657 -52.163 64.496 1.00 0.01 C
ATOM 22 N2 G A 47 -38.654 -50.927 63.980 1.00 0.01 N
ATOM 23 N3 G A 47 -37.774 -53.096 64.106 1.00 0.01 N
ATOM 24 C4 G A 47 -37.941 -54.290 64.735 1.00 0.01 C
ATOM 25 P A A 48 -32.676 -55.719 66.985 1.00 7.91 P
ATOM 26 OP1 A A 48 -32.222 -56.756 67.934 1.00 7.91 O
ATOM 27 OP2 A A 48 -33.828 -54.856 67.365 1.00 7.91 O
ATOM 28 O5' A A 48 -31.456 -54.811 66.547 1.00 7.91 O
TER
ATOM 1 O3' G B 47 -33.068 -56.476 65.615 1.00 0.01 O
ATOM 2 P A B 48 -32.676 -55.719 66.985 1.00 7.91 P
ATOM 3 OP1 A B 48 -32.222 -56.756 67.934 1.00 7.91 O
ATOM 4 OP2 A B 48 -33.828 -54.856 67.365 1.00 7.91 O
ATOM 5 O5' A B 48 -31.456 -54.811 66.547 1.00 7.91 O
ATOM 6 C5' A B 48 -31.656 -53.788 65.612 1.00 7.91 C
ATOM 7 C4' A B 48 -30.542 -52.806 65.639 1.00 7.91 C
ATOM 8 O4' A B 48 -30.712 -51.879 64.545 1.00 7.91 O
ATOM 9 C3' A B 48 -30.456 -51.951 66.891 1.00 7.91 C
ATOM 10 O3' A B 48 -29.105 -51.554 67.076 1.00 7.91 O
ATOM 11 C2' A B 48 -31.265 -50.734 66.511 1.00 7.91 C
ATOM 12 O2' A B 48 -30.952 -49.590 67.257 1.00 7.91 O
ATOM 13 C1' A B 48 -30.866 -50.570 65.052 1.00 7.91 C
ATOM 14 N9 A B 48 -31.860 -49.893 64.231 1.00 7.90 N
ATOM 15 C8 A B 48 -31.652 -48.863 63.362 1.00 7.90 C
ATOM 16 N7 A B 48 -32.729 -48.474 62.748 1.00 7.90 N
ATOM 17 C5 A B 48 -33.694 -49.314 63.240 1.00 7.90 C
ATOM 18 C6 A B 48 -35.044 -49.392 62.956 1.00 7.90 C
ATOM 19 N6 A B 48 -35.637 -48.578 62.087 1.00 7.90 N
ATOM 20 N1 A B 48 -35.739 -50.349 63.597 1.00 7.90 N
ATOM 21 C2 A B 48 -35.099 -51.150 64.456 1.00 7.90 C
ATOM 22 N3 A B 48 -33.828 -51.165 64.810 1.00 7.90 N
ATOM 23 C4 A B 48 -33.180 -50.205 64.150 1.00 7.90 C
ATOM 24 P U B 49 -28.442 -51.623 68.512 1.00 17.73 P
ATOM 25 OP1 U B 49 -29.551 -51.570 69.493 1.00 17.73 O
ATOM 26 OP2 U B 49 -27.400 -50.583 68.542 1.00 17.73 O
ATOM 27 O5' U B 49 -27.774 -53.063 68.541 1.00 17.73 O
TER
Atoms:
OP1: (-33.824,-60.844,67.031)
OP2: (-36.165,-60.278,67.905)
C3': (-34.407,-56.475,65.164)
C1': (-36.073,-55.753,63.738)
C5': (-34.795,-58.949,64.682)
O6: (-40.689,-53.787,66.922)
O4': (-35.968,-57.146,63.627)
C8: (-37.764,-56.385,65.448)
C2: (-38.657,-52.163,64.496)
C6: (-39.804,-53.622,66.088)
C5: (-38.883,-54.604,65.683)
C4: (-37.941,-54.290,64.735)
P: (-35.212,-60.357,66.782)
C4': (-34.703,-57.556,64.167)
C2': (-34.760,-55.273,64.335)
O2': (-33.824,-55.137,63.275)
N1: (-39.626,-52.393,65.440)
N2: (-38.654,-50.927,63.980)
N3: (-37.774,-53.096,64.106)
N7: (-38.773,-55.909,66.116)
N9: (-37.214,-55.456,64.606)
O5': (-35.188,-58.981,66.020)
O3': (-33.068,-56.476,65.615)
OP2: (-36.165,-60.278,67.905)
C3': (-34.407,-56.475,65.164)
C1': (-36.073,-55.753,63.738)
C5': (-34.795,-58.949,64.682)
O6: (-40.689,-53.787,66.922)
O4': (-35.968,-57.146,63.627)
C8: (-37.764,-56.385,65.448)
C2: (-38.657,-52.163,64.496)
C6: (-39.804,-53.622,66.088)
C5: (-38.883,-54.604,65.683)
C4: (-37.941,-54.290,64.735)
P: (-35.212,-60.357,66.782)
C4': (-34.703,-57.556,64.167)
C2': (-34.760,-55.273,64.335)
O2': (-33.824,-55.137,63.275)
N1: (-39.626,-52.393,65.440)
N2: (-38.654,-50.927,63.980)
N3: (-37.774,-53.096,64.106)
N7: (-38.773,-55.909,66.116)
N9: (-37.214,-55.456,64.606)
O5': (-35.188,-58.981,66.020)
O3': (-33.068,-56.476,65.615)
OP1: (-32.222,-56.756,67.934)
OP2: (-33.828,-54.856,67.365)
C3': (-30.456,-51.951,66.891)
C1': (-30.866,-50.570,65.052)
C5': (-31.656,-53.788,65.612)
O4': (-30.712,-51.879,64.545)
C8: (-31.652,-48.863,63.362)
O2': (-30.952,-49.590,67.257)
C6: (-35.044,-49.392,62.956)
C5: (-33.694,-49.314,63.240)
C4: (-33.180,-50.205,64.150)
P: (-32.676,-55.719,66.985)
C4': (-30.542,-52.806,65.639)
C2': (-31.265,-50.734,66.511)
C2: (-35.099,-51.150,64.456)
N1: (-35.739,-50.349,63.597)
N3: (-33.828,-51.165,64.810)
N6: (-35.637,-48.578,62.087)
N7: (-32.729,-48.474,62.748)
N9: (-31.860,-49.893,64.231)
O5': (-31.456,-54.811,66.547)
O3': (-29.105,-51.554,67.076)
OP2: (-33.828,-54.856,67.365)
C3': (-30.456,-51.951,66.891)
C1': (-30.866,-50.570,65.052)
C5': (-31.656,-53.788,65.612)
O4': (-30.712,-51.879,64.545)
C8: (-31.652,-48.863,63.362)
O2': (-30.952,-49.590,67.257)
C6: (-35.044,-49.392,62.956)
C5: (-33.694,-49.314,63.240)
C4: (-33.180,-50.205,64.150)
P: (-32.676,-55.719,66.985)
C4': (-30.542,-52.806,65.639)
C2': (-31.265,-50.734,66.511)
C2: (-35.099,-51.150,64.456)
N1: (-35.739,-50.349,63.597)
N3: (-33.828,-51.165,64.810)
N6: (-35.637,-48.578,62.087)
N7: (-32.729,-48.474,62.748)
N9: (-31.860,-49.893,64.231)
O5': (-31.456,-54.811,66.547)
O3': (-29.105,-51.554,67.076)
Image (generated by PyMOL):