Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11333:11334
Extra
PDB:
ATOM 1 O3' U A1332 101.325 2.739 76.974 1.00 44.64 O
ATOM 2 P G A1333 102.310 3.599 77.889 1.00 41.90 P
ATOM 3 OP1 G A1333 102.896 4.699 77.046 1.00 42.03 O
ATOM 4 OP2 G A1333 103.225 2.622 78.533 1.00 42.19 O
ATOM 5 O5' G A1333 101.326 4.219 78.954 1.00 41.81 O
ATOM 6 C5' G A1333 100.841 5.521 78.758 1.00 41.74 C
ATOM 7 C4' G A1333 99.872 5.906 79.818 1.00 41.65 C
ATOM 8 O4' G A1333 99.092 4.770 80.193 1.00 41.42 O
ATOM 9 C3' G A1333 100.472 6.326 81.107 1.00 42.03 C
ATOM 10 O3' G A1333 101.001 7.623 81.041 1.00 42.27 O
ATOM 11 C2' G A1333 99.296 6.166 82.052 1.00 41.85 C
ATOM 12 O2' G A1333 98.354 7.183 81.821 1.00 41.65 O
ATOM 13 C1' G A1333 98.699 4.886 81.525 1.00 41.51 C
ATOM 14 N9 G A1333 99.172 3.701 82.227 1.00 41.66 N
ATOM 15 C8 G A1333 99.944 2.719 81.636 1.00 41.72 C
ATOM 16 N7 G A1333 100.187 1.714 82.440 1.00 41.86 N
ATOM 17 C5 G A1333 99.514 2.090 83.604 1.00 41.88 C
ATOM 18 C6 G A1333 99.443 1.421 84.829 1.00 42.03 C
ATOM 19 O6 G A1333 99.993 0.331 85.019 1.00 42.16 O
ATOM 20 N1 G A1333 98.681 2.087 85.796 1.00 42.02 N
ATOM 21 C2 G A1333 98.064 3.288 85.572 1.00 41.89 C
ATOM 22 N2 G A1333 97.353 3.826 86.583 1.00 41.91 N
ATOM 23 N3 G A1333 98.140 3.935 84.425 1.00 41.76 N
ATOM 24 C4 G A1333 98.860 3.284 83.496 1.00 41.75 C
ATOM 25 P A A1334 102.237 8.036 81.969 1.00 44.10 P
ATOM 26 OP1 A A1334 103.459 8.121 81.092 1.00 44.32 O
ATOM 27 OP2 A A1334 102.241 7.094 83.135 1.00 44.20 O
ATOM 28 O5' A A1334 101.794 9.475 82.444 1.00 44.19 O
TER
ATOM 1 O3' G B1333 101.001 7.623 81.041 1.00 42.27 O
ATOM 2 P A B1334 102.237 8.036 81.969 1.00 44.10 P
ATOM 3 OP1 A B1334 103.459 8.121 81.092 1.00 44.32 O
ATOM 4 OP2 A B1334 102.241 7.094 83.135 1.00 44.20 O
ATOM 5 O5' A B1334 101.794 9.475 82.444 1.00 44.19 O
ATOM 6 C5' A B1334 100.535 9.634 83.043 1.00 43.95 C
ATOM 7 C4' A B1334 100.331 11.031 83.510 1.00 44.12 C
ATOM 8 O4' A B1334 99.016 11.128 84.133 1.00 43.88 O
ATOM 9 C3' A B1334 101.315 11.466 84.555 1.00 44.61 C
ATOM 10 O3' A B1334 101.392 12.882 84.546 1.00 44.80 O
ATOM 11 C2' A B1334 100.630 10.979 85.817 1.00 44.59 C
ATOM 12 O2' A B1334 101.100 11.551 87.018 1.00 45.00 O
ATOM 13 C1' A B1334 99.166 11.334 85.513 1.00 44.18 C
ATOM 14 N9 A B1334 98.212 10.491 86.227 1.00 43.96 N
ATOM 15 C8 A B1334 97.242 10.875 87.115 1.00 43.92 C
ATOM 16 N7 A B1334 96.581 9.878 87.706 1.00 43.75 N
ATOM 17 C5 A B1334 97.218 8.753 87.182 1.00 43.70 C
ATOM 18 C6 A B1334 97.027 7.388 87.393 1.00 43.56 C
ATOM 19 N6 A B1334 96.134 6.852 88.190 1.00 43.44 N
ATOM 20 N1 A B1334 97.806 6.556 86.711 1.00 43.57 N
ATOM 21 C2 A B1334 98.711 7.060 85.873 1.00 43.70 C
ATOM 22 N3 A B1334 98.992 8.322 85.575 1.00 43.84 N
ATOM 23 C4 A B1334 98.214 9.127 86.282 1.00 43.83 C
ATOM 24 P C B1335 102.803 13.612 84.293 1.00 54.15 P
ATOM 25 OP1 C B1335 103.768 12.938 85.208 1.00 54.50 O
ATOM 26 OP2 C B1335 102.553 15.106 84.412 1.00 54.29 O
ATOM 27 O5' C B1335 103.159 13.250 82.792 1.00 53.95 O
TER
ATOM 2 P G A1333 102.310 3.599 77.889 1.00 41.90 P
ATOM 3 OP1 G A1333 102.896 4.699 77.046 1.00 42.03 O
ATOM 4 OP2 G A1333 103.225 2.622 78.533 1.00 42.19 O
ATOM 5 O5' G A1333 101.326 4.219 78.954 1.00 41.81 O
ATOM 6 C5' G A1333 100.841 5.521 78.758 1.00 41.74 C
ATOM 7 C4' G A1333 99.872 5.906 79.818 1.00 41.65 C
ATOM 8 O4' G A1333 99.092 4.770 80.193 1.00 41.42 O
ATOM 9 C3' G A1333 100.472 6.326 81.107 1.00 42.03 C
ATOM 10 O3' G A1333 101.001 7.623 81.041 1.00 42.27 O
ATOM 11 C2' G A1333 99.296 6.166 82.052 1.00 41.85 C
ATOM 12 O2' G A1333 98.354 7.183 81.821 1.00 41.65 O
ATOM 13 C1' G A1333 98.699 4.886 81.525 1.00 41.51 C
ATOM 14 N9 G A1333 99.172 3.701 82.227 1.00 41.66 N
ATOM 15 C8 G A1333 99.944 2.719 81.636 1.00 41.72 C
ATOM 16 N7 G A1333 100.187 1.714 82.440 1.00 41.86 N
ATOM 17 C5 G A1333 99.514 2.090 83.604 1.00 41.88 C
ATOM 18 C6 G A1333 99.443 1.421 84.829 1.00 42.03 C
ATOM 19 O6 G A1333 99.993 0.331 85.019 1.00 42.16 O
ATOM 20 N1 G A1333 98.681 2.087 85.796 1.00 42.02 N
ATOM 21 C2 G A1333 98.064 3.288 85.572 1.00 41.89 C
ATOM 22 N2 G A1333 97.353 3.826 86.583 1.00 41.91 N
ATOM 23 N3 G A1333 98.140 3.935 84.425 1.00 41.76 N
ATOM 24 C4 G A1333 98.860 3.284 83.496 1.00 41.75 C
ATOM 25 P A A1334 102.237 8.036 81.969 1.00 44.10 P
ATOM 26 OP1 A A1334 103.459 8.121 81.092 1.00 44.32 O
ATOM 27 OP2 A A1334 102.241 7.094 83.135 1.00 44.20 O
ATOM 28 O5' A A1334 101.794 9.475 82.444 1.00 44.19 O
TER
ATOM 1 O3' G B1333 101.001 7.623 81.041 1.00 42.27 O
ATOM 2 P A B1334 102.237 8.036 81.969 1.00 44.10 P
ATOM 3 OP1 A B1334 103.459 8.121 81.092 1.00 44.32 O
ATOM 4 OP2 A B1334 102.241 7.094 83.135 1.00 44.20 O
ATOM 5 O5' A B1334 101.794 9.475 82.444 1.00 44.19 O
ATOM 6 C5' A B1334 100.535 9.634 83.043 1.00 43.95 C
ATOM 7 C4' A B1334 100.331 11.031 83.510 1.00 44.12 C
ATOM 8 O4' A B1334 99.016 11.128 84.133 1.00 43.88 O
ATOM 9 C3' A B1334 101.315 11.466 84.555 1.00 44.61 C
ATOM 10 O3' A B1334 101.392 12.882 84.546 1.00 44.80 O
ATOM 11 C2' A B1334 100.630 10.979 85.817 1.00 44.59 C
ATOM 12 O2' A B1334 101.100 11.551 87.018 1.00 45.00 O
ATOM 13 C1' A B1334 99.166 11.334 85.513 1.00 44.18 C
ATOM 14 N9 A B1334 98.212 10.491 86.227 1.00 43.96 N
ATOM 15 C8 A B1334 97.242 10.875 87.115 1.00 43.92 C
ATOM 16 N7 A B1334 96.581 9.878 87.706 1.00 43.75 N
ATOM 17 C5 A B1334 97.218 8.753 87.182 1.00 43.70 C
ATOM 18 C6 A B1334 97.027 7.388 87.393 1.00 43.56 C
ATOM 19 N6 A B1334 96.134 6.852 88.190 1.00 43.44 N
ATOM 20 N1 A B1334 97.806 6.556 86.711 1.00 43.57 N
ATOM 21 C2 A B1334 98.711 7.060 85.873 1.00 43.70 C
ATOM 22 N3 A B1334 98.992 8.322 85.575 1.00 43.84 N
ATOM 23 C4 A B1334 98.214 9.127 86.282 1.00 43.83 C
ATOM 24 P C B1335 102.803 13.612 84.293 1.00 54.15 P
ATOM 25 OP1 C B1335 103.768 12.938 85.208 1.00 54.50 O
ATOM 26 OP2 C B1335 102.553 15.106 84.412 1.00 54.29 O
ATOM 27 O5' C B1335 103.159 13.250 82.792 1.00 53.95 O
TER
Atoms:
OP1: (102.896,4.699,77.046)
OP2: (103.225,2.622,78.533)
C3': (100.472,6.326,81.107)
C1': (98.699,4.886,81.525)
C5': (100.841,5.521,78.758)
O6: (99.993,0.331,85.019)
O4': (99.092,4.770,80.193)
C8: (99.944,2.719,81.636)
C2: (98.064,3.288,85.572)
C6: (99.443,1.421,84.829)
C5: (99.514,2.090,83.604)
C4: (98.860,3.284,83.496)
P: (102.310,3.599,77.889)
C4': (99.872,5.906,79.818)
C2': (99.296,6.166,82.052)
O2': (98.354,7.183,81.821)
N1: (98.681,2.087,85.796)
N2: (97.353,3.826,86.583)
N3: (98.140,3.935,84.425)
N7: (100.187,1.714,82.440)
N9: (99.172,3.701,82.227)
O5': (101.326,4.219,78.954)
O3': (101.001,7.623,81.041)
OP2: (103.225,2.622,78.533)
C3': (100.472,6.326,81.107)
C1': (98.699,4.886,81.525)
C5': (100.841,5.521,78.758)
O6: (99.993,0.331,85.019)
O4': (99.092,4.770,80.193)
C8: (99.944,2.719,81.636)
C2: (98.064,3.288,85.572)
C6: (99.443,1.421,84.829)
C5: (99.514,2.090,83.604)
C4: (98.860,3.284,83.496)
P: (102.310,3.599,77.889)
C4': (99.872,5.906,79.818)
C2': (99.296,6.166,82.052)
O2': (98.354,7.183,81.821)
N1: (98.681,2.087,85.796)
N2: (97.353,3.826,86.583)
N3: (98.140,3.935,84.425)
N7: (100.187,1.714,82.440)
N9: (99.172,3.701,82.227)
O5': (101.326,4.219,78.954)
O3': (101.001,7.623,81.041)
OP1: (103.459,8.121,81.092)
OP2: (102.241,7.094,83.135)
C3': (101.315,11.466,84.555)
C1': (99.166,11.334,85.513)
C5': (100.535,9.634,83.043)
O4': (99.016,11.128,84.133)
C8: (97.242,10.875,87.115)
O2': (101.100,11.551,87.018)
C6: (97.027,7.388,87.393)
C5: (97.218,8.753,87.182)
C4: (98.214,9.127,86.282)
P: (102.237,8.036,81.969)
C4': (100.331,11.031,83.510)
C2': (100.630,10.979,85.817)
C2: (98.711,7.060,85.873)
N1: (97.806,6.556,86.711)
N3: (98.992,8.322,85.575)
N6: (96.134,6.852,88.190)
N7: (96.581,9.878,87.706)
N9: (98.212,10.491,86.227)
O5': (101.794,9.475,82.444)
O3': (101.392,12.882,84.546)
OP2: (102.241,7.094,83.135)
C3': (101.315,11.466,84.555)
C1': (99.166,11.334,85.513)
C5': (100.535,9.634,83.043)
O4': (99.016,11.128,84.133)
C8: (97.242,10.875,87.115)
O2': (101.100,11.551,87.018)
C6: (97.027,7.388,87.393)
C5: (97.218,8.753,87.182)
C4: (98.214,9.127,86.282)
P: (102.237,8.036,81.969)
C4': (100.331,11.031,83.510)
C2': (100.630,10.979,85.817)
C2: (98.711,7.060,85.873)
N1: (97.806,6.556,86.711)
N3: (98.992,8.322,85.575)
N6: (96.134,6.852,88.190)
N7: (96.581,9.878,87.706)
N9: (98.212,10.491,86.227)
O5': (101.794,9.475,82.444)
O3': (101.392,12.882,84.546)
Image (generated by PyMOL):