Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2558:A2513
Extra
PDB:
ATOM 1 O3' U A2557 65.108 -54.883 40.458 1.00 50.62 O
ATOM 2 P G A2558 65.721 -55.806 41.613 1.00 46.28 P
ATOM 3 OP1 G A2558 66.218 -54.885 42.675 1.00 53.65 O
ATOM 4 OP2 G A2558 66.670 -56.740 40.963 1.00 47.95 O
ATOM 5 O5' G A2558 64.462 -56.628 42.138 1.00 47.35 O
ATOM 6 C5' G A2558 63.558 -56.072 43.075 1.00 46.91 C
ATOM 7 C4' G A2558 62.622 -57.118 43.612 1.00 42.91 C
ATOM 8 O4' G A2558 61.857 -57.689 42.527 1.00 47.26 O
ATOM 9 C3' G A2558 63.273 -58.313 44.266 1.00 45.02 C
ATOM 10 O3' G A2558 63.655 -58.058 45.604 1.00 54.78 O
ATOM 11 C2' G A2558 62.199 -59.391 44.121 1.00 46.05 C
ATOM 12 O2' G A2558 61.157 -59.195 45.063 1.00 52.30 O
ATOM 13 C1' G A2558 61.642 -59.062 42.750 1.00 40.86 C
ATOM 14 N9 G A2558 62.310 -59.813 41.671 1.00 43.78 N
ATOM 15 C8 G A2558 63.011 -59.225 40.662 1.00 42.61 C
ATOM 16 N7 G A2558 63.496 -60.072 39.807 1.00 41.93 N
ATOM 17 C5 G A2558 63.086 -61.291 40.270 1.00 34.19 C
ATOM 18 C6 G A2558 63.327 -62.551 39.712 1.00 38.90 C
ATOM 19 O6 G A2558 63.971 -62.813 38.684 1.00 43.76 O
ATOM 20 N1 G A2558 62.730 -63.544 40.472 1.00 37.76 N
ATOM 21 C2 G A2558 62.000 -63.327 41.609 1.00 39.21 C
ATOM 22 N2 G A2558 61.507 -64.416 42.205 1.00 41.49 N
ATOM 23 N3 G A2558 61.774 -62.141 42.136 1.00 39.03 N
ATOM 24 C4 G A2558 62.345 -61.166 41.413 1.00 38.71 C
ATOM 25 P U A2559 65.038 -58.621 46.176 1.00 49.58 P
ATOM 26 OP1 U A2559 65.293 -57.935 47.462 1.00 67.40 O
ATOM 27 OP2 U A2559 66.034 -58.491 45.089 1.00 68.43 O
ATOM 28 O5' U A2559 64.710 -60.156 46.427 1.00 51.07 O
TER
ATOM 1 O3' U B2512 53.109 -64.825 47.949 1.00 42.18 O
ATOM 2 P C B2513 52.730 -63.414 47.281 1.00 47.02 P
ATOM 3 OP1 C B2513 51.443 -62.995 47.878 1.00 56.92 O
ATOM 4 OP2 C B2513 52.809 -63.588 45.808 1.00 58.01 O
ATOM 5 O5' C B2513 53.897 -62.446 47.782 1.00 42.29 O
ATOM 6 C5' C B2513 53.707 -61.639 48.931 1.00 46.04 C
ATOM 7 C4' C B2513 54.902 -60.769 49.224 1.00 39.94 C
ATOM 8 O4' C B2513 56.114 -61.532 49.077 1.00 36.87 O
ATOM 9 C3' C B2513 55.111 -59.575 48.310 1.00 41.88 C
ATOM 10 O3' C B2513 54.273 -58.492 48.624 1.00 41.96 O
ATOM 11 C2' C B2513 56.567 -59.266 48.526 1.00 45.03 C
ATOM 12 O2' C B2513 56.733 -58.619 49.779 1.00 43.12 O
ATOM 13 C1' C B2513 57.150 -60.681 48.624 1.00 48.55 C
ATOM 14 N1 C B2513 57.653 -61.187 47.307 1.00 48.23 N
ATOM 15 C2 C B2513 58.831 -60.673 46.765 1.00 45.58 C
ATOM 16 O2 C B2513 59.438 -59.777 47.359 1.00 47.34 O
ATOM 17 N3 C B2513 59.293 -61.129 45.591 1.00 45.35 N
ATOM 18 C4 C B2513 58.649 -62.079 44.945 1.00 44.00 C
ATOM 19 N4 C B2513 59.149 -62.493 43.773 1.00 47.47 N
ATOM 20 C5 C B2513 57.458 -62.640 45.481 1.00 46.54 C
ATOM 21 C6 C B2513 56.993 -62.178 46.644 1.00 44.53 C
ATOM 22 P U B2514 53.403 -57.794 47.471 1.00 47.08 P
ATOM 23 OP1 U B2514 52.316 -57.038 48.137 1.00 65.90 O
ATOM 24 OP2 U B2514 53.033 -58.851 46.498 1.00 50.96 O
ATOM 25 O5' U B2514 54.446 -56.784 46.813 1.00 45.53 O
TER
ATOM 2 P G A2558 65.721 -55.806 41.613 1.00 46.28 P
ATOM 3 OP1 G A2558 66.218 -54.885 42.675 1.00 53.65 O
ATOM 4 OP2 G A2558 66.670 -56.740 40.963 1.00 47.95 O
ATOM 5 O5' G A2558 64.462 -56.628 42.138 1.00 47.35 O
ATOM 6 C5' G A2558 63.558 -56.072 43.075 1.00 46.91 C
ATOM 7 C4' G A2558 62.622 -57.118 43.612 1.00 42.91 C
ATOM 8 O4' G A2558 61.857 -57.689 42.527 1.00 47.26 O
ATOM 9 C3' G A2558 63.273 -58.313 44.266 1.00 45.02 C
ATOM 10 O3' G A2558 63.655 -58.058 45.604 1.00 54.78 O
ATOM 11 C2' G A2558 62.199 -59.391 44.121 1.00 46.05 C
ATOM 12 O2' G A2558 61.157 -59.195 45.063 1.00 52.30 O
ATOM 13 C1' G A2558 61.642 -59.062 42.750 1.00 40.86 C
ATOM 14 N9 G A2558 62.310 -59.813 41.671 1.00 43.78 N
ATOM 15 C8 G A2558 63.011 -59.225 40.662 1.00 42.61 C
ATOM 16 N7 G A2558 63.496 -60.072 39.807 1.00 41.93 N
ATOM 17 C5 G A2558 63.086 -61.291 40.270 1.00 34.19 C
ATOM 18 C6 G A2558 63.327 -62.551 39.712 1.00 38.90 C
ATOM 19 O6 G A2558 63.971 -62.813 38.684 1.00 43.76 O
ATOM 20 N1 G A2558 62.730 -63.544 40.472 1.00 37.76 N
ATOM 21 C2 G A2558 62.000 -63.327 41.609 1.00 39.21 C
ATOM 22 N2 G A2558 61.507 -64.416 42.205 1.00 41.49 N
ATOM 23 N3 G A2558 61.774 -62.141 42.136 1.00 39.03 N
ATOM 24 C4 G A2558 62.345 -61.166 41.413 1.00 38.71 C
ATOM 25 P U A2559 65.038 -58.621 46.176 1.00 49.58 P
ATOM 26 OP1 U A2559 65.293 -57.935 47.462 1.00 67.40 O
ATOM 27 OP2 U A2559 66.034 -58.491 45.089 1.00 68.43 O
ATOM 28 O5' U A2559 64.710 -60.156 46.427 1.00 51.07 O
TER
ATOM 1 O3' U B2512 53.109 -64.825 47.949 1.00 42.18 O
ATOM 2 P C B2513 52.730 -63.414 47.281 1.00 47.02 P
ATOM 3 OP1 C B2513 51.443 -62.995 47.878 1.00 56.92 O
ATOM 4 OP2 C B2513 52.809 -63.588 45.808 1.00 58.01 O
ATOM 5 O5' C B2513 53.897 -62.446 47.782 1.00 42.29 O
ATOM 6 C5' C B2513 53.707 -61.639 48.931 1.00 46.04 C
ATOM 7 C4' C B2513 54.902 -60.769 49.224 1.00 39.94 C
ATOM 8 O4' C B2513 56.114 -61.532 49.077 1.00 36.87 O
ATOM 9 C3' C B2513 55.111 -59.575 48.310 1.00 41.88 C
ATOM 10 O3' C B2513 54.273 -58.492 48.624 1.00 41.96 O
ATOM 11 C2' C B2513 56.567 -59.266 48.526 1.00 45.03 C
ATOM 12 O2' C B2513 56.733 -58.619 49.779 1.00 43.12 O
ATOM 13 C1' C B2513 57.150 -60.681 48.624 1.00 48.55 C
ATOM 14 N1 C B2513 57.653 -61.187 47.307 1.00 48.23 N
ATOM 15 C2 C B2513 58.831 -60.673 46.765 1.00 45.58 C
ATOM 16 O2 C B2513 59.438 -59.777 47.359 1.00 47.34 O
ATOM 17 N3 C B2513 59.293 -61.129 45.591 1.00 45.35 N
ATOM 18 C4 C B2513 58.649 -62.079 44.945 1.00 44.00 C
ATOM 19 N4 C B2513 59.149 -62.493 43.773 1.00 47.47 N
ATOM 20 C5 C B2513 57.458 -62.640 45.481 1.00 46.54 C
ATOM 21 C6 C B2513 56.993 -62.178 46.644 1.00 44.53 C
ATOM 22 P U B2514 53.403 -57.794 47.471 1.00 47.08 P
ATOM 23 OP1 U B2514 52.316 -57.038 48.137 1.00 65.90 O
ATOM 24 OP2 U B2514 53.033 -58.851 46.498 1.00 50.96 O
ATOM 25 O5' U B2514 54.446 -56.784 46.813 1.00 45.53 O
TER
Atoms:
OP1: (66.218,-54.885,42.675)
OP2: (66.670,-56.740,40.963)
C3': (63.273,-58.313,44.266)
C1': (61.642,-59.062,42.750)
C5': (63.558,-56.072,43.075)
O6: (63.971,-62.813,38.684)
O4': (61.857,-57.689,42.527)
C8: (63.011,-59.225,40.662)
C2: (62.000,-63.327,41.609)
C6: (63.327,-62.551,39.712)
C5: (63.086,-61.291,40.270)
C4: (62.345,-61.166,41.413)
P: (65.721,-55.806,41.613)
C4': (62.622,-57.118,43.612)
C2': (62.199,-59.391,44.121)
O2': (61.157,-59.195,45.063)
N1: (62.730,-63.544,40.472)
N2: (61.507,-64.416,42.205)
N3: (61.774,-62.141,42.136)
N7: (63.496,-60.072,39.807)
N9: (62.310,-59.813,41.671)
O5': (64.462,-56.628,42.138)
O3': (63.655,-58.058,45.604)
OP2: (66.670,-56.740,40.963)
C3': (63.273,-58.313,44.266)
C1': (61.642,-59.062,42.750)
C5': (63.558,-56.072,43.075)
O6: (63.971,-62.813,38.684)
O4': (61.857,-57.689,42.527)
C8: (63.011,-59.225,40.662)
C2: (62.000,-63.327,41.609)
C6: (63.327,-62.551,39.712)
C5: (63.086,-61.291,40.270)
C4: (62.345,-61.166,41.413)
P: (65.721,-55.806,41.613)
C4': (62.622,-57.118,43.612)
C2': (62.199,-59.391,44.121)
O2': (61.157,-59.195,45.063)
N1: (62.730,-63.544,40.472)
N2: (61.507,-64.416,42.205)
N3: (61.774,-62.141,42.136)
N7: (63.496,-60.072,39.807)
N9: (62.310,-59.813,41.671)
O5': (64.462,-56.628,42.138)
O3': (63.655,-58.058,45.604)
C2: (58.831,-60.673,46.765)
OP1: (51.443,-62.995,47.878)
OP2: (52.809,-63.588,45.808)
C4: (58.649,-62.079,44.945)
O5': (53.897,-62.446,47.782)
C3': (55.111,-59.575,48.310)
C1': (57.150,-60.681,48.624)
O4': (56.114,-61.532,49.077)
C5': (53.707,-61.639,48.931)
P: (52.730,-63.414,47.281)
O2: (59.438,-59.777,47.359)
C4': (54.902,-60.769,49.224)
C2': (56.567,-59.266,48.526)
O2': (56.733,-58.619,49.779)
N1: (57.653,-61.187,47.307)
N3: (59.293,-61.129,45.591)
N4: (59.149,-62.493,43.773)
C6: (56.993,-62.178,46.644)
C5: (57.458,-62.640,45.481)
O3': (54.273,-58.492,48.624)
OP1: (51.443,-62.995,47.878)
OP2: (52.809,-63.588,45.808)
C4: (58.649,-62.079,44.945)
O5': (53.897,-62.446,47.782)
C3': (55.111,-59.575,48.310)
C1': (57.150,-60.681,48.624)
O4': (56.114,-61.532,49.077)
C5': (53.707,-61.639,48.931)
P: (52.730,-63.414,47.281)
O2: (59.438,-59.777,47.359)
C4': (54.902,-60.769,49.224)
C2': (56.567,-59.266,48.526)
O2': (56.733,-58.619,49.779)
N1: (57.653,-61.187,47.307)
N3: (59.293,-61.129,45.591)
N4: (59.149,-62.493,43.773)
C6: (56.993,-62.178,46.644)
C5: (57.458,-62.640,45.481)
O3': (54.273,-58.492,48.624)
Image (generated by PyMOL):