Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1937:11000
Extra
PDB:
ATOM 1 O3' A A 936 37.821 -52.492 32.979 1.00 45.60 O
ATOM 2 P G A 937 36.450 -51.926 32.379 1.00 46.22 P
ATOM 3 OP1 G A 937 35.374 -52.298 33.332 1.00 46.16 O
ATOM 4 OP2 G A 937 36.356 -52.379 30.950 1.00 46.69 O
ATOM 5 O5' G A 937 36.669 -50.369 32.438 1.00 45.77 O
ATOM 6 C5' G A 937 36.400 -49.679 33.634 1.00 45.33 C
ATOM 7 C4' G A 937 36.436 -48.216 33.419 1.00 44.99 C
ATOM 8 O4' G A 937 37.721 -47.873 32.822 1.00 44.99 O
ATOM 9 C3' G A 937 35.351 -47.688 32.478 1.00 45.11 C
ATOM 10 O3' G A 937 34.529 -46.722 33.153 1.00 44.76 O
ATOM 11 C2' G A 937 36.151 -47.029 31.337 1.00 45.18 C
ATOM 12 O2' G A 937 35.627 -45.822 30.839 1.00 45.02 O
ATOM 13 C1' G A 937 37.536 -46.817 31.943 1.00 44.93 C
ATOM 14 N9 G A 937 38.578 -46.801 30.916 1.00 45.13 N
ATOM 15 C8 G A 937 38.878 -47.767 30.026 1.00 45.58 C
ATOM 16 N7 G A 937 39.709 -47.376 29.101 1.00 45.68 N
ATOM 17 C5 G A 937 39.920 -46.053 29.348 1.00 45.28 C
ATOM 18 C6 G A 937 40.721 -45.098 28.671 1.00 45.20 C
ATOM 19 O6 G A 937 41.428 -45.235 27.672 1.00 45.46 O
ATOM 20 N1 G A 937 40.677 -43.850 29.259 1.00 44.76 N
ATOM 21 C2 G A 937 39.928 -43.562 30.366 1.00 44.45 C
ATOM 22 N2 G A 937 39.999 -42.302 30.810 1.00 44.06 N
ATOM 23 N3 G A 937 39.175 -44.447 30.992 1.00 44.53 N
ATOM 24 C4 G A 937 39.214 -45.677 30.443 1.00 44.95 C
ATOM 25 P G A 938 33.089 -47.140 33.786 1.00 42.64 P
ATOM 26 OP1 G A 938 33.170 -46.939 35.268 1.00 42.27 O
ATOM 27 OP2 G A 938 32.767 -48.484 33.282 1.00 43.11 O
ATOM 28 O5' G A 938 32.100 -46.088 33.142 1.00 42.58 O
TER
ATOM 1 O3' A B 999 44.838 -38.406 22.632 1.00 45.13 O
ATOM 2 P U B1000 45.929 -38.929 23.674 1.00 45.24 P
ATOM 3 OP1 U B1000 47.256 -38.626 23.048 1.00 45.35 O
ATOM 4 OP2 U B1000 45.598 -40.320 24.023 1.00 45.44 O
ATOM 5 O5' U B1000 45.694 -38.008 24.922 1.00 44.72 O
ATOM 6 C5' U B1000 46.023 -36.644 24.871 1.00 44.47 C
ATOM 7 C4' U B1000 45.673 -36.002 26.147 1.00 44.02 C
ATOM 8 O4' U B1000 44.227 -36.053 26.315 1.00 43.99 O
ATOM 9 C3' U B1000 46.192 -36.708 27.385 1.00 43.83 C
ATOM 10 O3' U B1000 47.557 -36.462 27.627 1.00 43.73 O
ATOM 11 C2' U B1000 45.263 -36.156 28.443 1.00 43.48 C
ATOM 12 O2' U B1000 45.580 -34.800 28.687 1.00 43.17 O
ATOM 13 C1' U B1000 43.917 -36.229 27.682 1.00 43.69 C
ATOM 14 N1 U B1000 43.239 -37.582 27.867 1.00 43.91 N
ATOM 15 C2 U B1000 42.510 -37.805 29.045 1.00 43.68 C
ATOM 16 O2 U B1000 42.346 -36.939 29.920 1.00 43.31 O
ATOM 17 N3 U B1000 41.951 -39.069 29.181 1.00 43.91 N
ATOM 18 C4 U B1000 42.065 -40.113 28.335 1.00 44.32 C
ATOM 19 O4 U B1000 41.535 -41.124 28.678 1.00 44.47 O
ATOM 20 C5 U B1000 42.801 -39.864 27.157 1.00 44.55 C
ATOM 21 C6 U B1000 43.343 -38.638 26.985 1.00 44.34 C
ATOM 22 P A B1001 48.402 -37.410 28.610 1.00 45.53 P
ATOM 23 OP1 A B1001 49.681 -36.712 28.912 1.00 45.34 O
ATOM 24 OP2 A B1001 48.455 -38.734 28.016 1.00 45.94 O
ATOM 25 O5' A B1001 47.486 -37.448 29.875 1.00 45.24 O
TER
ATOM 2 P G A 937 36.450 -51.926 32.379 1.00 46.22 P
ATOM 3 OP1 G A 937 35.374 -52.298 33.332 1.00 46.16 O
ATOM 4 OP2 G A 937 36.356 -52.379 30.950 1.00 46.69 O
ATOM 5 O5' G A 937 36.669 -50.369 32.438 1.00 45.77 O
ATOM 6 C5' G A 937 36.400 -49.679 33.634 1.00 45.33 C
ATOM 7 C4' G A 937 36.436 -48.216 33.419 1.00 44.99 C
ATOM 8 O4' G A 937 37.721 -47.873 32.822 1.00 44.99 O
ATOM 9 C3' G A 937 35.351 -47.688 32.478 1.00 45.11 C
ATOM 10 O3' G A 937 34.529 -46.722 33.153 1.00 44.76 O
ATOM 11 C2' G A 937 36.151 -47.029 31.337 1.00 45.18 C
ATOM 12 O2' G A 937 35.627 -45.822 30.839 1.00 45.02 O
ATOM 13 C1' G A 937 37.536 -46.817 31.943 1.00 44.93 C
ATOM 14 N9 G A 937 38.578 -46.801 30.916 1.00 45.13 N
ATOM 15 C8 G A 937 38.878 -47.767 30.026 1.00 45.58 C
ATOM 16 N7 G A 937 39.709 -47.376 29.101 1.00 45.68 N
ATOM 17 C5 G A 937 39.920 -46.053 29.348 1.00 45.28 C
ATOM 18 C6 G A 937 40.721 -45.098 28.671 1.00 45.20 C
ATOM 19 O6 G A 937 41.428 -45.235 27.672 1.00 45.46 O
ATOM 20 N1 G A 937 40.677 -43.850 29.259 1.00 44.76 N
ATOM 21 C2 G A 937 39.928 -43.562 30.366 1.00 44.45 C
ATOM 22 N2 G A 937 39.999 -42.302 30.810 1.00 44.06 N
ATOM 23 N3 G A 937 39.175 -44.447 30.992 1.00 44.53 N
ATOM 24 C4 G A 937 39.214 -45.677 30.443 1.00 44.95 C
ATOM 25 P G A 938 33.089 -47.140 33.786 1.00 42.64 P
ATOM 26 OP1 G A 938 33.170 -46.939 35.268 1.00 42.27 O
ATOM 27 OP2 G A 938 32.767 -48.484 33.282 1.00 43.11 O
ATOM 28 O5' G A 938 32.100 -46.088 33.142 1.00 42.58 O
TER
ATOM 1 O3' A B 999 44.838 -38.406 22.632 1.00 45.13 O
ATOM 2 P U B1000 45.929 -38.929 23.674 1.00 45.24 P
ATOM 3 OP1 U B1000 47.256 -38.626 23.048 1.00 45.35 O
ATOM 4 OP2 U B1000 45.598 -40.320 24.023 1.00 45.44 O
ATOM 5 O5' U B1000 45.694 -38.008 24.922 1.00 44.72 O
ATOM 6 C5' U B1000 46.023 -36.644 24.871 1.00 44.47 C
ATOM 7 C4' U B1000 45.673 -36.002 26.147 1.00 44.02 C
ATOM 8 O4' U B1000 44.227 -36.053 26.315 1.00 43.99 O
ATOM 9 C3' U B1000 46.192 -36.708 27.385 1.00 43.83 C
ATOM 10 O3' U B1000 47.557 -36.462 27.627 1.00 43.73 O
ATOM 11 C2' U B1000 45.263 -36.156 28.443 1.00 43.48 C
ATOM 12 O2' U B1000 45.580 -34.800 28.687 1.00 43.17 O
ATOM 13 C1' U B1000 43.917 -36.229 27.682 1.00 43.69 C
ATOM 14 N1 U B1000 43.239 -37.582 27.867 1.00 43.91 N
ATOM 15 C2 U B1000 42.510 -37.805 29.045 1.00 43.68 C
ATOM 16 O2 U B1000 42.346 -36.939 29.920 1.00 43.31 O
ATOM 17 N3 U B1000 41.951 -39.069 29.181 1.00 43.91 N
ATOM 18 C4 U B1000 42.065 -40.113 28.335 1.00 44.32 C
ATOM 19 O4 U B1000 41.535 -41.124 28.678 1.00 44.47 O
ATOM 20 C5 U B1000 42.801 -39.864 27.157 1.00 44.55 C
ATOM 21 C6 U B1000 43.343 -38.638 26.985 1.00 44.34 C
ATOM 22 P A B1001 48.402 -37.410 28.610 1.00 45.53 P
ATOM 23 OP1 A B1001 49.681 -36.712 28.912 1.00 45.34 O
ATOM 24 OP2 A B1001 48.455 -38.734 28.016 1.00 45.94 O
ATOM 25 O5' A B1001 47.486 -37.448 29.875 1.00 45.24 O
TER
Atoms:
OP1: (35.374,-52.298,33.332)
OP2: (36.356,-52.379,30.950)
C3': (35.351,-47.688,32.478)
C1': (37.536,-46.817,31.943)
C5': (36.400,-49.679,33.634)
O6: (41.428,-45.235,27.672)
O4': (37.721,-47.873,32.822)
C8: (38.878,-47.767,30.026)
C2: (39.928,-43.562,30.366)
C6: (40.721,-45.098,28.671)
C5: (39.920,-46.053,29.348)
C4: (39.214,-45.677,30.443)
P: (36.450,-51.926,32.379)
C4': (36.436,-48.216,33.419)
C2': (36.151,-47.029,31.337)
O2': (35.627,-45.822,30.839)
N1: (40.677,-43.850,29.259)
N2: (39.999,-42.302,30.810)
N3: (39.175,-44.447,30.992)
N7: (39.709,-47.376,29.101)
N9: (38.578,-46.801,30.916)
O5': (36.669,-50.369,32.438)
O3': (34.529,-46.722,33.153)
OP2: (36.356,-52.379,30.950)
C3': (35.351,-47.688,32.478)
C1': (37.536,-46.817,31.943)
C5': (36.400,-49.679,33.634)
O6: (41.428,-45.235,27.672)
O4': (37.721,-47.873,32.822)
C8: (38.878,-47.767,30.026)
C2: (39.928,-43.562,30.366)
C6: (40.721,-45.098,28.671)
C5: (39.920,-46.053,29.348)
C4: (39.214,-45.677,30.443)
P: (36.450,-51.926,32.379)
C4': (36.436,-48.216,33.419)
C2': (36.151,-47.029,31.337)
O2': (35.627,-45.822,30.839)
N1: (40.677,-43.850,29.259)
N2: (39.999,-42.302,30.810)
N3: (39.175,-44.447,30.992)
N7: (39.709,-47.376,29.101)
N9: (38.578,-46.801,30.916)
O5': (36.669,-50.369,32.438)
O3': (34.529,-46.722,33.153)
C4: (42.065,-40.113,28.335)
N3: (41.951,-39.069,29.181)
OP1: (47.256,-38.626,23.048)
OP2: (45.598,-40.320,24.023)
C2: (42.510,-37.805,29.045)
C1': (43.917,-36.229,27.682)
C3': (46.192,-36.708,27.385)
O5': (45.694,-38.008,24.922)
O4': (44.227,-36.053,26.315)
C5': (46.023,-36.644,24.871)
P: (45.929,-38.929,23.674)
C4': (45.673,-36.002,26.147)
C2': (45.263,-36.156,28.443)
O2': (45.580,-34.800,28.687)
N1: (43.239,-37.582,27.867)
O4: (41.535,-41.124,28.678)
O2: (42.346,-36.939,29.920)
C6: (43.343,-38.638,26.985)
C5: (42.801,-39.864,27.157)
O3': (47.557,-36.462,27.627)
N3: (41.951,-39.069,29.181)
OP1: (47.256,-38.626,23.048)
OP2: (45.598,-40.320,24.023)
C2: (42.510,-37.805,29.045)
C1': (43.917,-36.229,27.682)
C3': (46.192,-36.708,27.385)
O5': (45.694,-38.008,24.922)
O4': (44.227,-36.053,26.315)
C5': (46.023,-36.644,24.871)
P: (45.929,-38.929,23.674)
C4': (45.673,-36.002,26.147)
C2': (45.263,-36.156,28.443)
O2': (45.580,-34.800,28.687)
N1: (43.239,-37.582,27.867)
O4: (41.535,-41.124,28.678)
O2: (42.346,-36.939,29.920)
C6: (43.343,-38.638,26.985)
C5: (42.801,-39.864,27.157)
O3': (47.557,-36.462,27.627)
Image (generated by PyMOL):