Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1DK1:B25:B41
Extra
PDB:
ATOM 1 O3' G A 24 4.239 70.107 21.631 1.00 75.25 O
ATOM 2 P G A 25 5.380 70.149 22.763 1.00 74.71 P
ATOM 3 OP1 G A 25 6.040 71.474 22.684 1.00 60.55 O
ATOM 4 OP2 G A 25 6.201 68.911 22.613 1.00 68.50 O
ATOM 5 O5' G A 25 4.535 70.041 24.113 1.00 55.82 O
ATOM 6 C5' G A 25 3.157 70.429 24.127 1.00 49.17 C
ATOM 7 C4' G A 25 2.415 69.726 25.240 1.00 70.91 C
ATOM 8 O4' G A 25 2.095 68.354 24.888 1.00 78.35 O
ATOM 9 C3' G A 25 3.162 69.590 26.547 1.00 68.14 C
ATOM 10 O3' G A 25 3.166 70.818 27.261 1.00 81.71 O
ATOM 11 C2' G A 25 2.371 68.488 27.249 1.00 65.93 C
ATOM 12 O2' G A 25 1.172 68.961 27.823 1.00 64.87 O
ATOM 13 C1' G A 25 2.013 67.573 26.074 1.00 65.15 C
ATOM 14 N9 G A 25 2.870 66.395 25.931 1.00 53.77 N
ATOM 15 C8 G A 25 3.826 66.174 24.968 1.00 57.25 C
ATOM 16 N7 G A 25 4.433 65.022 25.104 1.00 60.94 N
ATOM 17 C5 G A 25 3.837 64.448 26.219 1.00 50.19 C
ATOM 18 C6 G A 25 4.073 63.196 26.845 1.00 55.63 C
ATOM 19 O6 G A 25 4.875 62.303 26.519 1.00 58.96 O
ATOM 20 N1 G A 25 3.251 63.022 27.955 1.00 35.28 N
ATOM 21 C2 G A 25 2.317 63.925 28.391 1.00 37.85 C
ATOM 22 N2 G A 25 1.619 63.579 29.481 1.00 42.57 N
ATOM 23 N3 G A 25 2.082 65.082 27.808 1.00 33.89 N
ATOM 24 C4 G A 25 2.871 65.281 26.741 1.00 36.89 C
ATOM 25 P A A 26 4.317 71.098 28.345 0.60 81.39 P
ATOM 26 OP1 A A 26 4.166 72.472 28.884 0.60 85.39 O
ATOM 27 OP2 A A 26 5.613 70.677 27.751 0.60 78.75 O
ATOM 28 O5' A A 26 3.934 70.096 29.510 0.60 80.38 O
TER
ATOM 1 O3' G B 40 4.636 52.719 29.804 1.00 42.33 O
ATOM 2 P U B 41 3.333 53.165 28.980 1.00 42.55 P
ATOM 3 OP1 U B 41 2.255 52.200 29.302 1.00 29.63 O
ATOM 4 OP2 U B 41 3.732 53.393 27.553 1.00 21.68 O
ATOM 5 O5' U B 41 2.966 54.564 29.627 1.00 21.59 O
ATOM 6 C5' U B 41 2.446 54.631 30.945 1.00 23.57 C
ATOM 7 C4' U B 41 2.185 56.062 31.293 1.00 44.69 C
ATOM 8 O4' U B 41 3.412 56.816 31.118 1.00 43.29 O
ATOM 9 C3' U B 41 1.231 56.762 30.348 1.00 42.82 C
ATOM 10 O3' U B 41 -0.102 56.488 30.706 1.00 46.15 O
ATOM 11 C2' U B 41 1.580 58.217 30.586 1.00 40.49 C
ATOM 12 O2' U B 41 1.093 58.629 31.850 1.00 41.07 O
ATOM 13 C1' U B 41 3.098 58.126 30.666 1.00 38.89 C
ATOM 14 N1 U B 41 3.761 58.312 29.375 1.00 31.34 N
ATOM 15 C2 U B 41 3.833 59.591 28.867 1.00 41.81 C
ATOM 16 O2 U B 41 3.313 60.551 29.426 1.00 43.30 O
ATOM 17 N3 U B 41 4.536 59.699 27.691 1.00 16.80 N
ATOM 18 C4 U B 41 5.161 58.663 27.001 1.00 37.51 C
ATOM 19 O4 U B 41 5.791 58.898 25.971 1.00 46.18 O
ATOM 20 C5 U B 41 5.010 57.383 27.590 1.00 31.53 C
ATOM 21 C6 U B 41 4.321 57.252 28.723 1.00 33.78 C
ATOM 22 P C B 42 -1.155 56.138 29.567 1.00 42.64 P
ATOM 23 OP1 C B 42 -2.140 55.277 30.246 1.00 30.91 O
ATOM 24 OP2 C B 42 -0.400 55.645 28.388 1.00 29.02 O
ATOM 25 O5' C B 42 -1.792 57.541 29.162 1.00 46.13 O
TER
ATOM 2 P G A 25 5.380 70.149 22.763 1.00 74.71 P
ATOM 3 OP1 G A 25 6.040 71.474 22.684 1.00 60.55 O
ATOM 4 OP2 G A 25 6.201 68.911 22.613 1.00 68.50 O
ATOM 5 O5' G A 25 4.535 70.041 24.113 1.00 55.82 O
ATOM 6 C5' G A 25 3.157 70.429 24.127 1.00 49.17 C
ATOM 7 C4' G A 25 2.415 69.726 25.240 1.00 70.91 C
ATOM 8 O4' G A 25 2.095 68.354 24.888 1.00 78.35 O
ATOM 9 C3' G A 25 3.162 69.590 26.547 1.00 68.14 C
ATOM 10 O3' G A 25 3.166 70.818 27.261 1.00 81.71 O
ATOM 11 C2' G A 25 2.371 68.488 27.249 1.00 65.93 C
ATOM 12 O2' G A 25 1.172 68.961 27.823 1.00 64.87 O
ATOM 13 C1' G A 25 2.013 67.573 26.074 1.00 65.15 C
ATOM 14 N9 G A 25 2.870 66.395 25.931 1.00 53.77 N
ATOM 15 C8 G A 25 3.826 66.174 24.968 1.00 57.25 C
ATOM 16 N7 G A 25 4.433 65.022 25.104 1.00 60.94 N
ATOM 17 C5 G A 25 3.837 64.448 26.219 1.00 50.19 C
ATOM 18 C6 G A 25 4.073 63.196 26.845 1.00 55.63 C
ATOM 19 O6 G A 25 4.875 62.303 26.519 1.00 58.96 O
ATOM 20 N1 G A 25 3.251 63.022 27.955 1.00 35.28 N
ATOM 21 C2 G A 25 2.317 63.925 28.391 1.00 37.85 C
ATOM 22 N2 G A 25 1.619 63.579 29.481 1.00 42.57 N
ATOM 23 N3 G A 25 2.082 65.082 27.808 1.00 33.89 N
ATOM 24 C4 G A 25 2.871 65.281 26.741 1.00 36.89 C
ATOM 25 P A A 26 4.317 71.098 28.345 0.60 81.39 P
ATOM 26 OP1 A A 26 4.166 72.472 28.884 0.60 85.39 O
ATOM 27 OP2 A A 26 5.613 70.677 27.751 0.60 78.75 O
ATOM 28 O5' A A 26 3.934 70.096 29.510 0.60 80.38 O
TER
ATOM 1 O3' G B 40 4.636 52.719 29.804 1.00 42.33 O
ATOM 2 P U B 41 3.333 53.165 28.980 1.00 42.55 P
ATOM 3 OP1 U B 41 2.255 52.200 29.302 1.00 29.63 O
ATOM 4 OP2 U B 41 3.732 53.393 27.553 1.00 21.68 O
ATOM 5 O5' U B 41 2.966 54.564 29.627 1.00 21.59 O
ATOM 6 C5' U B 41 2.446 54.631 30.945 1.00 23.57 C
ATOM 7 C4' U B 41 2.185 56.062 31.293 1.00 44.69 C
ATOM 8 O4' U B 41 3.412 56.816 31.118 1.00 43.29 O
ATOM 9 C3' U B 41 1.231 56.762 30.348 1.00 42.82 C
ATOM 10 O3' U B 41 -0.102 56.488 30.706 1.00 46.15 O
ATOM 11 C2' U B 41 1.580 58.217 30.586 1.00 40.49 C
ATOM 12 O2' U B 41 1.093 58.629 31.850 1.00 41.07 O
ATOM 13 C1' U B 41 3.098 58.126 30.666 1.00 38.89 C
ATOM 14 N1 U B 41 3.761 58.312 29.375 1.00 31.34 N
ATOM 15 C2 U B 41 3.833 59.591 28.867 1.00 41.81 C
ATOM 16 O2 U B 41 3.313 60.551 29.426 1.00 43.30 O
ATOM 17 N3 U B 41 4.536 59.699 27.691 1.00 16.80 N
ATOM 18 C4 U B 41 5.161 58.663 27.001 1.00 37.51 C
ATOM 19 O4 U B 41 5.791 58.898 25.971 1.00 46.18 O
ATOM 20 C5 U B 41 5.010 57.383 27.590 1.00 31.53 C
ATOM 21 C6 U B 41 4.321 57.252 28.723 1.00 33.78 C
ATOM 22 P C B 42 -1.155 56.138 29.567 1.00 42.64 P
ATOM 23 OP1 C B 42 -2.140 55.277 30.246 1.00 30.91 O
ATOM 24 OP2 C B 42 -0.400 55.645 28.388 1.00 29.02 O
ATOM 25 O5' C B 42 -1.792 57.541 29.162 1.00 46.13 O
TER
Atoms:
OP1: (6.040,71.474,22.684)
OP2: (6.201,68.911,22.613)
C3': (3.162,69.590,26.547)
C1': (2.013,67.573,26.074)
C5': (3.157,70.429,24.127)
O6: (4.875,62.303,26.519)
O4': (2.095,68.354,24.888)
C8: (3.826,66.174,24.968)
C2: (2.317,63.925,28.391)
C6: (4.073,63.196,26.845)
C5: (3.837,64.448,26.219)
C4: (2.871,65.281,26.741)
P: (5.380,70.149,22.763)
C4': (2.415,69.726,25.240)
C2': (2.371,68.488,27.249)
O2': (1.172,68.961,27.823)
N1: (3.251,63.022,27.955)
N2: (1.619,63.579,29.481)
N3: (2.082,65.082,27.808)
N7: (4.433,65.022,25.104)
N9: (2.870,66.395,25.931)
O5': (4.535,70.041,24.113)
O3': (3.166,70.818,27.261)
OP2: (6.201,68.911,22.613)
C3': (3.162,69.590,26.547)
C1': (2.013,67.573,26.074)
C5': (3.157,70.429,24.127)
O6: (4.875,62.303,26.519)
O4': (2.095,68.354,24.888)
C8: (3.826,66.174,24.968)
C2: (2.317,63.925,28.391)
C6: (4.073,63.196,26.845)
C5: (3.837,64.448,26.219)
C4: (2.871,65.281,26.741)
P: (5.380,70.149,22.763)
C4': (2.415,69.726,25.240)
C2': (2.371,68.488,27.249)
O2': (1.172,68.961,27.823)
N1: (3.251,63.022,27.955)
N2: (1.619,63.579,29.481)
N3: (2.082,65.082,27.808)
N7: (4.433,65.022,25.104)
N9: (2.870,66.395,25.931)
O5': (4.535,70.041,24.113)
O3': (3.166,70.818,27.261)
C4: (5.161,58.663,27.001)
N3: (4.536,59.699,27.691)
OP1: (2.255,52.200,29.302)
OP2: (3.732,53.393,27.553)
C2: (3.833,59.591,28.867)
C1': (3.098,58.126,30.666)
C3': (1.231,56.762,30.348)
O5': (2.966,54.564,29.627)
O4': (3.412,56.816,31.118)
C5': (2.446,54.631,30.945)
P: (3.333,53.165,28.980)
C4': (2.185,56.062,31.293)
C2': (1.580,58.217,30.586)
O2': (1.093,58.629,31.850)
N1: (3.761,58.312,29.375)
O4: (5.791,58.898,25.971)
O2: (3.313,60.551,29.426)
C6: (4.321,57.252,28.723)
C5: (5.010,57.383,27.590)
O3': (-0.102,56.488,30.706)
N3: (4.536,59.699,27.691)
OP1: (2.255,52.200,29.302)
OP2: (3.732,53.393,27.553)
C2: (3.833,59.591,28.867)
C1': (3.098,58.126,30.666)
C3': (1.231,56.762,30.348)
O5': (2.966,54.564,29.627)
O4': (3.412,56.816,31.118)
C5': (2.446,54.631,30.945)
P: (3.333,53.165,28.980)
C4': (2.185,56.062,31.293)
C2': (1.580,58.217,30.586)
O2': (1.093,58.629,31.850)
N1: (3.761,58.312,29.375)
O4: (5.791,58.898,25.971)
O2: (3.313,60.551,29.426)
C6: (4.321,57.252,28.723)
C5: (5.010,57.383,27.590)
O3': (-0.102,56.488,30.706)
Image (generated by PyMOL):