Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2197:A2213
Extra
PDB:
ATOM 1 O3' U A2196 -49.218 -7.712 49.673 1.00 7.77 O
ATOM 2 P G A2197 -49.325 -6.493 50.704 1.00 1.88 P
ATOM 3 OP1 G A2197 -49.080 -6.987 52.078 1.00 1.88 O
ATOM 4 OP2 G A2197 -50.585 -5.808 50.411 1.00 1.88 O
ATOM 5 O5' G A2197 -48.110 -5.600 50.236 1.00 1.88 O
ATOM 6 C5' G A2197 -46.951 -5.459 51.030 1.00 1.88 C
ATOM 7 C4' G A2197 -46.602 -4.006 51.180 1.00 1.88 C
ATOM 8 O4' G A2197 -47.631 -3.326 51.941 1.00 1.88 O
ATOM 9 C3' G A2197 -45.323 -3.706 51.921 1.00 1.88 C
ATOM 10 O3' G A2197 -44.195 -3.769 51.077 1.00 1.88 O
ATOM 11 C2' G A2197 -45.583 -2.316 52.451 1.00 1.88 C
ATOM 12 O2' G A2197 -45.440 -1.371 51.403 1.00 1.88 O
ATOM 13 C1' G A2197 -47.049 -2.395 52.803 1.00 1.88 C
ATOM 14 N9 G A2197 -47.278 -2.849 54.170 1.00 1.52 N
ATOM 15 C8 G A2197 -48.024 -3.960 54.451 1.00 1.52 C
ATOM 16 N7 G A2197 -48.167 -4.205 55.733 1.00 1.52 N
ATOM 17 C5 G A2197 -47.500 -3.170 56.311 1.00 1.52 C
ATOM 18 C6 G A2197 -47.351 -2.952 57.660 1.00 1.52 C
ATOM 19 O6 G A2197 -47.798 -3.658 58.548 1.00 1.52 O
ATOM 20 N1 G A2197 -46.605 -1.819 57.892 1.00 1.52 N
ATOM 21 C2 G A2197 -46.083 -1.013 56.915 1.00 1.52 C
ATOM 22 N2 G A2197 -45.388 0.044 57.331 1.00 1.52 N
ATOM 23 N3 G A2197 -46.220 -1.217 55.619 1.00 1.52 N
ATOM 24 C4 G A2197 -46.945 -2.318 55.384 1.00 1.52 C
ATOM 25 P A A2198 -42.870 -4.481 51.582 1.00 0.01 P
ATOM 26 OP1 A A2198 -41.897 -4.399 50.476 1.00 0.01 O
ATOM 27 OP2 A A2198 -43.267 -5.812 52.088 1.00 0.01 O
ATOM 28 O5' A A2198 -42.412 -3.555 52.796 1.00 0.01 O
TER
ATOM 1 O3' U B2212 -44.793 -1.783 68.371 1.00 13.72 O
ATOM 2 P U B2213 -46.068 -0.949 67.863 1.00 12.93 P
ATOM 3 OP1 U B2213 -46.183 0.244 68.738 1.00 12.93 O
ATOM 4 OP2 U B2213 -47.215 -1.895 67.783 1.00 12.93 O
ATOM 5 O5' U B2213 -45.656 -0.510 66.399 1.00 12.93 O
ATOM 6 C5' U B2213 -45.253 0.814 66.117 1.00 12.93 C
ATOM 7 C4' U B2213 -45.152 1.042 64.634 1.00 12.93 C
ATOM 8 O4' U B2213 -44.646 -0.153 63.980 1.00 12.93 O
ATOM 9 C3' U B2213 -46.456 1.309 63.929 1.00 12.93 C
ATOM 10 O3' U B2213 -46.884 2.646 64.081 1.00 12.93 O
ATOM 11 C2' U B2213 -46.143 0.916 62.490 1.00 12.93 C
ATOM 12 O2' U B2213 -45.423 1.933 61.824 1.00 12.93 O
ATOM 13 C1' U B2213 -45.220 -0.277 62.696 1.00 12.93 C
ATOM 14 N1 U B2213 -45.968 -1.540 62.618 1.00 12.59 N
ATOM 15 C2 U B2213 -46.330 -1.814 61.346 1.00 12.59 C
ATOM 16 O2 U B2213 -46.005 -1.076 60.452 1.00 12.59 O
ATOM 17 N3 U B2213 -47.059 -2.934 61.189 1.00 12.59 N
ATOM 18 C4 U B2213 -47.458 -3.797 62.171 1.00 12.59 C
ATOM 19 O4 U B2213 -48.120 -4.783 61.844 1.00 12.59 O
ATOM 20 C5 U B2213 -47.044 -3.456 63.491 1.00 12.59 C
ATOM 21 C6 U B2213 -46.332 -2.343 63.667 1.00 12.59 C
ATOM 22 P G B2214 -48.457 3.005 64.083 1.00 0.57 P
ATOM 23 OP1 G B2214 -48.571 4.413 64.555 1.00 0.57 O
ATOM 24 OP2 G B2214 -49.178 1.938 64.850 1.00 0.57 O
ATOM 25 O5' G B2214 -48.823 2.920 62.522 1.00 0.57 O
TER
ATOM 2 P G A2197 -49.325 -6.493 50.704 1.00 1.88 P
ATOM 3 OP1 G A2197 -49.080 -6.987 52.078 1.00 1.88 O
ATOM 4 OP2 G A2197 -50.585 -5.808 50.411 1.00 1.88 O
ATOM 5 O5' G A2197 -48.110 -5.600 50.236 1.00 1.88 O
ATOM 6 C5' G A2197 -46.951 -5.459 51.030 1.00 1.88 C
ATOM 7 C4' G A2197 -46.602 -4.006 51.180 1.00 1.88 C
ATOM 8 O4' G A2197 -47.631 -3.326 51.941 1.00 1.88 O
ATOM 9 C3' G A2197 -45.323 -3.706 51.921 1.00 1.88 C
ATOM 10 O3' G A2197 -44.195 -3.769 51.077 1.00 1.88 O
ATOM 11 C2' G A2197 -45.583 -2.316 52.451 1.00 1.88 C
ATOM 12 O2' G A2197 -45.440 -1.371 51.403 1.00 1.88 O
ATOM 13 C1' G A2197 -47.049 -2.395 52.803 1.00 1.88 C
ATOM 14 N9 G A2197 -47.278 -2.849 54.170 1.00 1.52 N
ATOM 15 C8 G A2197 -48.024 -3.960 54.451 1.00 1.52 C
ATOM 16 N7 G A2197 -48.167 -4.205 55.733 1.00 1.52 N
ATOM 17 C5 G A2197 -47.500 -3.170 56.311 1.00 1.52 C
ATOM 18 C6 G A2197 -47.351 -2.952 57.660 1.00 1.52 C
ATOM 19 O6 G A2197 -47.798 -3.658 58.548 1.00 1.52 O
ATOM 20 N1 G A2197 -46.605 -1.819 57.892 1.00 1.52 N
ATOM 21 C2 G A2197 -46.083 -1.013 56.915 1.00 1.52 C
ATOM 22 N2 G A2197 -45.388 0.044 57.331 1.00 1.52 N
ATOM 23 N3 G A2197 -46.220 -1.217 55.619 1.00 1.52 N
ATOM 24 C4 G A2197 -46.945 -2.318 55.384 1.00 1.52 C
ATOM 25 P A A2198 -42.870 -4.481 51.582 1.00 0.01 P
ATOM 26 OP1 A A2198 -41.897 -4.399 50.476 1.00 0.01 O
ATOM 27 OP2 A A2198 -43.267 -5.812 52.088 1.00 0.01 O
ATOM 28 O5' A A2198 -42.412 -3.555 52.796 1.00 0.01 O
TER
ATOM 1 O3' U B2212 -44.793 -1.783 68.371 1.00 13.72 O
ATOM 2 P U B2213 -46.068 -0.949 67.863 1.00 12.93 P
ATOM 3 OP1 U B2213 -46.183 0.244 68.738 1.00 12.93 O
ATOM 4 OP2 U B2213 -47.215 -1.895 67.783 1.00 12.93 O
ATOM 5 O5' U B2213 -45.656 -0.510 66.399 1.00 12.93 O
ATOM 6 C5' U B2213 -45.253 0.814 66.117 1.00 12.93 C
ATOM 7 C4' U B2213 -45.152 1.042 64.634 1.00 12.93 C
ATOM 8 O4' U B2213 -44.646 -0.153 63.980 1.00 12.93 O
ATOM 9 C3' U B2213 -46.456 1.309 63.929 1.00 12.93 C
ATOM 10 O3' U B2213 -46.884 2.646 64.081 1.00 12.93 O
ATOM 11 C2' U B2213 -46.143 0.916 62.490 1.00 12.93 C
ATOM 12 O2' U B2213 -45.423 1.933 61.824 1.00 12.93 O
ATOM 13 C1' U B2213 -45.220 -0.277 62.696 1.00 12.93 C
ATOM 14 N1 U B2213 -45.968 -1.540 62.618 1.00 12.59 N
ATOM 15 C2 U B2213 -46.330 -1.814 61.346 1.00 12.59 C
ATOM 16 O2 U B2213 -46.005 -1.076 60.452 1.00 12.59 O
ATOM 17 N3 U B2213 -47.059 -2.934 61.189 1.00 12.59 N
ATOM 18 C4 U B2213 -47.458 -3.797 62.171 1.00 12.59 C
ATOM 19 O4 U B2213 -48.120 -4.783 61.844 1.00 12.59 O
ATOM 20 C5 U B2213 -47.044 -3.456 63.491 1.00 12.59 C
ATOM 21 C6 U B2213 -46.332 -2.343 63.667 1.00 12.59 C
ATOM 22 P G B2214 -48.457 3.005 64.083 1.00 0.57 P
ATOM 23 OP1 G B2214 -48.571 4.413 64.555 1.00 0.57 O
ATOM 24 OP2 G B2214 -49.178 1.938 64.850 1.00 0.57 O
ATOM 25 O5' G B2214 -48.823 2.920 62.522 1.00 0.57 O
TER
Atoms:
OP1: (-49.080,-6.987,52.078)
OP2: (-50.585,-5.808,50.411)
C3': (-45.323,-3.706,51.921)
C1': (-47.049,-2.395,52.803)
C5': (-46.951,-5.459,51.030)
O6: (-47.798,-3.658,58.548)
O4': (-47.631,-3.326,51.941)
C8: (-48.024,-3.960,54.451)
C2: (-46.083,-1.013,56.915)
C6: (-47.351,-2.952,57.660)
C5: (-47.500,-3.170,56.311)
C4: (-46.945,-2.318,55.384)
P: (-49.325,-6.493,50.704)
C4': (-46.602,-4.006,51.180)
C2': (-45.583,-2.316,52.451)
O2': (-45.440,-1.371,51.403)
N1: (-46.605,-1.819,57.892)
N2: (-45.388,0.044,57.331)
N3: (-46.220,-1.217,55.619)
N7: (-48.167,-4.205,55.733)
N9: (-47.278,-2.849,54.170)
O5': (-48.110,-5.600,50.236)
O3': (-44.195,-3.769,51.077)
OP2: (-50.585,-5.808,50.411)
C3': (-45.323,-3.706,51.921)
C1': (-47.049,-2.395,52.803)
C5': (-46.951,-5.459,51.030)
O6: (-47.798,-3.658,58.548)
O4': (-47.631,-3.326,51.941)
C8: (-48.024,-3.960,54.451)
C2: (-46.083,-1.013,56.915)
C6: (-47.351,-2.952,57.660)
C5: (-47.500,-3.170,56.311)
C4: (-46.945,-2.318,55.384)
P: (-49.325,-6.493,50.704)
C4': (-46.602,-4.006,51.180)
C2': (-45.583,-2.316,52.451)
O2': (-45.440,-1.371,51.403)
N1: (-46.605,-1.819,57.892)
N2: (-45.388,0.044,57.331)
N3: (-46.220,-1.217,55.619)
N7: (-48.167,-4.205,55.733)
N9: (-47.278,-2.849,54.170)
O5': (-48.110,-5.600,50.236)
O3': (-44.195,-3.769,51.077)
C4: (-47.458,-3.797,62.171)
N3: (-47.059,-2.934,61.189)
OP1: (-46.183,0.244,68.738)
OP2: (-47.215,-1.895,67.783)
C2: (-46.330,-1.814,61.346)
C1': (-45.220,-0.277,62.696)
C3': (-46.456,1.309,63.929)
O5': (-45.656,-0.510,66.399)
O4': (-44.646,-0.153,63.980)
C5': (-45.253,0.814,66.117)
P: (-46.068,-0.949,67.863)
C4': (-45.152,1.042,64.634)
C2': (-46.143,0.916,62.490)
O2': (-45.423,1.933,61.824)
N1: (-45.968,-1.540,62.618)
O4: (-48.120,-4.783,61.844)
O2: (-46.005,-1.076,60.452)
C6: (-46.332,-2.343,63.667)
C5: (-47.044,-3.456,63.491)
O3': (-46.884,2.646,64.081)
N3: (-47.059,-2.934,61.189)
OP1: (-46.183,0.244,68.738)
OP2: (-47.215,-1.895,67.783)
C2: (-46.330,-1.814,61.346)
C1': (-45.220,-0.277,62.696)
C3': (-46.456,1.309,63.929)
O5': (-45.656,-0.510,66.399)
O4': (-44.646,-0.153,63.980)
C5': (-45.253,0.814,66.117)
P: (-46.068,-0.949,67.863)
C4': (-45.152,1.042,64.634)
C2': (-46.143,0.916,62.490)
O2': (-45.423,1.933,61.824)
N1: (-45.968,-1.540,62.618)
O4: (-48.120,-4.783,61.844)
O2: (-46.005,-1.076,60.452)
C6: (-46.332,-2.343,63.667)
C5: (-47.044,-3.456,63.491)
O3': (-46.884,2.646,64.081)
Image (generated by PyMOL):