Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0727:0718
Extra
PDB:
ATOM 1 O3' G A 726 56.620 63.111 61.193 1.00 59.46 O
ATOM 2 P G A 727 55.359 63.917 60.636 1.00 59.39 P
ATOM 3 OP1 G A 727 54.840 64.734 61.766 1.00 59.88 O
ATOM 4 OP2 G A 727 54.459 62.972 59.936 1.00 56.12 O
ATOM 5 O5' G A 727 56.010 64.878 59.552 1.00 57.37 O
ATOM 6 C5' G A 727 57.078 65.755 59.920 1.00 54.87 C
ATOM 7 C4' G A 727 57.433 66.646 58.768 1.00 53.87 C
ATOM 8 O4' G A 727 58.224 65.928 57.796 1.00 54.77 O
ATOM 9 C3' G A 727 56.263 67.164 57.962 1.00 52.55 C
ATOM 10 O3' G A 727 55.631 68.248 58.605 1.00 53.42 O
ATOM 11 C2' G A 727 56.951 67.581 56.678 1.00 53.96 C
ATOM 12 O2' G A 727 57.670 68.785 56.854 1.00 52.17 O
ATOM 13 C1' G A 727 57.942 66.429 56.498 1.00 55.37 C
ATOM 14 N9 G A 727 57.400 65.336 55.690 1.00 56.71 N
ATOM 15 C8 G A 727 56.876 64.150 56.145 1.00 57.36 C
ATOM 16 N7 G A 727 56.475 63.363 55.185 1.00 56.99 N
ATOM 17 C5 G A 727 56.748 64.069 54.025 1.00 56.23 C
ATOM 18 C6 G A 727 56.539 63.715 52.678 1.00 56.04 C
ATOM 19 O6 G A 727 56.045 62.679 52.226 1.00 55.44 O
ATOM 20 N1 G A 727 56.970 64.716 51.814 1.00 56.91 N
ATOM 21 C2 G A 727 57.531 65.911 52.199 1.00 57.10 C
ATOM 22 N2 G A 727 57.896 66.748 51.210 1.00 55.07 N
ATOM 23 N3 G A 727 57.723 66.258 53.462 1.00 57.64 N
ATOM 24 C4 G A 727 57.316 65.292 54.316 1.00 57.05 C
ATOM 25 P C A 728 54.080 68.525 58.337 1.00 51.13 P
ATOM 26 OP1 C A 728 53.694 69.692 59.159 1.00 49.91 O
ATOM 27 OP2 C A 728 53.369 67.242 58.510 1.00 51.75 O
ATOM 28 O5' C A 728 54.040 68.949 56.804 1.00 50.58 O
TER
ATOM 1 O3' G B 717 54.114 61.199 42.566 1.00 57.63 O
ATOM 2 P U B 718 55.577 60.610 42.881 1.00 56.49 P
ATOM 3 OP1 U B 718 56.252 60.461 41.573 1.00 55.86 O
ATOM 4 OP2 U B 718 55.472 59.443 43.792 1.00 56.04 O
ATOM 5 O5' U B 718 56.303 61.773 43.684 1.00 55.76 O
ATOM 6 C5' U B 718 56.481 63.075 43.105 1.00 53.96 C
ATOM 7 C4' U B 718 56.964 64.033 44.155 1.00 52.25 C
ATOM 8 O4' U B 718 55.945 64.153 45.178 1.00 51.65 O
ATOM 9 C3' U B 718 58.196 63.567 44.909 1.00 51.72 C
ATOM 10 O3' U B 718 59.385 63.906 44.211 1.00 52.49 O
ATOM 11 C2' U B 718 58.073 64.318 46.223 1.00 51.87 C
ATOM 12 O2' U B 718 58.496 65.652 46.112 1.00 52.05 O
ATOM 13 C1' U B 718 56.560 64.299 46.446 1.00 52.42 C
ATOM 14 N1 U B 718 56.129 63.203 47.327 1.00 53.73 N
ATOM 15 C2 U B 718 56.376 63.346 48.677 1.00 54.98 C
ATOM 16 O2 U B 718 56.878 64.340 49.152 1.00 58.45 O
ATOM 17 N3 U B 718 56.012 62.281 49.454 1.00 55.83 N
ATOM 18 C4 U B 718 55.430 61.114 49.035 1.00 56.21 C
ATOM 19 O4 U B 718 55.239 60.212 49.851 1.00 56.95 O
ATOM 20 C5 U B 718 55.172 61.048 47.628 1.00 55.81 C
ATOM 21 C6 U B 718 55.522 62.070 46.842 1.00 54.46 C
ATOM 22 P C B 719 60.768 63.192 44.605 1.00 54.48 P
ATOM 23 OP1 C B 719 61.794 63.647 43.640 1.00 55.26 O
ATOM 24 OP2 C B 719 60.506 61.751 44.768 1.00 55.59 O
ATOM 25 O5' C B 719 61.133 63.785 46.037 1.00 55.96 O
TER
ATOM 2 P G A 727 55.359 63.917 60.636 1.00 59.39 P
ATOM 3 OP1 G A 727 54.840 64.734 61.766 1.00 59.88 O
ATOM 4 OP2 G A 727 54.459 62.972 59.936 1.00 56.12 O
ATOM 5 O5' G A 727 56.010 64.878 59.552 1.00 57.37 O
ATOM 6 C5' G A 727 57.078 65.755 59.920 1.00 54.87 C
ATOM 7 C4' G A 727 57.433 66.646 58.768 1.00 53.87 C
ATOM 8 O4' G A 727 58.224 65.928 57.796 1.00 54.77 O
ATOM 9 C3' G A 727 56.263 67.164 57.962 1.00 52.55 C
ATOM 10 O3' G A 727 55.631 68.248 58.605 1.00 53.42 O
ATOM 11 C2' G A 727 56.951 67.581 56.678 1.00 53.96 C
ATOM 12 O2' G A 727 57.670 68.785 56.854 1.00 52.17 O
ATOM 13 C1' G A 727 57.942 66.429 56.498 1.00 55.37 C
ATOM 14 N9 G A 727 57.400 65.336 55.690 1.00 56.71 N
ATOM 15 C8 G A 727 56.876 64.150 56.145 1.00 57.36 C
ATOM 16 N7 G A 727 56.475 63.363 55.185 1.00 56.99 N
ATOM 17 C5 G A 727 56.748 64.069 54.025 1.00 56.23 C
ATOM 18 C6 G A 727 56.539 63.715 52.678 1.00 56.04 C
ATOM 19 O6 G A 727 56.045 62.679 52.226 1.00 55.44 O
ATOM 20 N1 G A 727 56.970 64.716 51.814 1.00 56.91 N
ATOM 21 C2 G A 727 57.531 65.911 52.199 1.00 57.10 C
ATOM 22 N2 G A 727 57.896 66.748 51.210 1.00 55.07 N
ATOM 23 N3 G A 727 57.723 66.258 53.462 1.00 57.64 N
ATOM 24 C4 G A 727 57.316 65.292 54.316 1.00 57.05 C
ATOM 25 P C A 728 54.080 68.525 58.337 1.00 51.13 P
ATOM 26 OP1 C A 728 53.694 69.692 59.159 1.00 49.91 O
ATOM 27 OP2 C A 728 53.369 67.242 58.510 1.00 51.75 O
ATOM 28 O5' C A 728 54.040 68.949 56.804 1.00 50.58 O
TER
ATOM 1 O3' G B 717 54.114 61.199 42.566 1.00 57.63 O
ATOM 2 P U B 718 55.577 60.610 42.881 1.00 56.49 P
ATOM 3 OP1 U B 718 56.252 60.461 41.573 1.00 55.86 O
ATOM 4 OP2 U B 718 55.472 59.443 43.792 1.00 56.04 O
ATOM 5 O5' U B 718 56.303 61.773 43.684 1.00 55.76 O
ATOM 6 C5' U B 718 56.481 63.075 43.105 1.00 53.96 C
ATOM 7 C4' U B 718 56.964 64.033 44.155 1.00 52.25 C
ATOM 8 O4' U B 718 55.945 64.153 45.178 1.00 51.65 O
ATOM 9 C3' U B 718 58.196 63.567 44.909 1.00 51.72 C
ATOM 10 O3' U B 718 59.385 63.906 44.211 1.00 52.49 O
ATOM 11 C2' U B 718 58.073 64.318 46.223 1.00 51.87 C
ATOM 12 O2' U B 718 58.496 65.652 46.112 1.00 52.05 O
ATOM 13 C1' U B 718 56.560 64.299 46.446 1.00 52.42 C
ATOM 14 N1 U B 718 56.129 63.203 47.327 1.00 53.73 N
ATOM 15 C2 U B 718 56.376 63.346 48.677 1.00 54.98 C
ATOM 16 O2 U B 718 56.878 64.340 49.152 1.00 58.45 O
ATOM 17 N3 U B 718 56.012 62.281 49.454 1.00 55.83 N
ATOM 18 C4 U B 718 55.430 61.114 49.035 1.00 56.21 C
ATOM 19 O4 U B 718 55.239 60.212 49.851 1.00 56.95 O
ATOM 20 C5 U B 718 55.172 61.048 47.628 1.00 55.81 C
ATOM 21 C6 U B 718 55.522 62.070 46.842 1.00 54.46 C
ATOM 22 P C B 719 60.768 63.192 44.605 1.00 54.48 P
ATOM 23 OP1 C B 719 61.794 63.647 43.640 1.00 55.26 O
ATOM 24 OP2 C B 719 60.506 61.751 44.768 1.00 55.59 O
ATOM 25 O5' C B 719 61.133 63.785 46.037 1.00 55.96 O
TER
Atoms:
OP1: (54.840,64.734,61.766)
OP2: (54.459,62.972,59.936)
C3': (56.263,67.164,57.962)
C1': (57.942,66.429,56.498)
C5': (57.078,65.755,59.920)
O6: (56.045,62.679,52.226)
O4': (58.224,65.928,57.796)
C8: (56.876,64.150,56.145)
C2: (57.531,65.911,52.199)
C6: (56.539,63.715,52.678)
C5: (56.748,64.069,54.025)
C4: (57.316,65.292,54.316)
P: (55.359,63.917,60.636)
C4': (57.433,66.646,58.768)
C2': (56.951,67.581,56.678)
O2': (57.670,68.785,56.854)
N1: (56.970,64.716,51.814)
N2: (57.896,66.748,51.210)
N3: (57.723,66.258,53.462)
N7: (56.475,63.363,55.185)
N9: (57.400,65.336,55.690)
O5': (56.010,64.878,59.552)
O3': (55.631,68.248,58.605)
OP2: (54.459,62.972,59.936)
C3': (56.263,67.164,57.962)
C1': (57.942,66.429,56.498)
C5': (57.078,65.755,59.920)
O6: (56.045,62.679,52.226)
O4': (58.224,65.928,57.796)
C8: (56.876,64.150,56.145)
C2: (57.531,65.911,52.199)
C6: (56.539,63.715,52.678)
C5: (56.748,64.069,54.025)
C4: (57.316,65.292,54.316)
P: (55.359,63.917,60.636)
C4': (57.433,66.646,58.768)
C2': (56.951,67.581,56.678)
O2': (57.670,68.785,56.854)
N1: (56.970,64.716,51.814)
N2: (57.896,66.748,51.210)
N3: (57.723,66.258,53.462)
N7: (56.475,63.363,55.185)
N9: (57.400,65.336,55.690)
O5': (56.010,64.878,59.552)
O3': (55.631,68.248,58.605)
C4: (55.430,61.114,49.035)
N3: (56.012,62.281,49.454)
OP1: (56.252,60.461,41.573)
OP2: (55.472,59.443,43.792)
C2: (56.376,63.346,48.677)
C1': (56.560,64.299,46.446)
C3': (58.196,63.567,44.909)
O5': (56.303,61.773,43.684)
O4': (55.945,64.153,45.178)
C5': (56.481,63.075,43.105)
P: (55.577,60.610,42.881)
C4': (56.964,64.033,44.155)
C2': (58.073,64.318,46.223)
O2': (58.496,65.652,46.112)
N1: (56.129,63.203,47.327)
O4: (55.239,60.212,49.851)
O2: (56.878,64.340,49.152)
C6: (55.522,62.070,46.842)
C5: (55.172,61.048,47.628)
O3': (59.385,63.906,44.211)
N3: (56.012,62.281,49.454)
OP1: (56.252,60.461,41.573)
OP2: (55.472,59.443,43.792)
C2: (56.376,63.346,48.677)
C1': (56.560,64.299,46.446)
C3': (58.196,63.567,44.909)
O5': (56.303,61.773,43.684)
O4': (55.945,64.153,45.178)
C5': (56.481,63.075,43.105)
P: (55.577,60.610,42.881)
C4': (56.964,64.033,44.155)
C2': (58.073,64.318,46.223)
O2': (58.496,65.652,46.112)
N1: (56.129,63.203,47.327)
O4: (55.239,60.212,49.851)
O2: (56.878,64.340,49.152)
C6: (55.522,62.070,46.842)
C5: (55.172,61.048,47.628)
O3': (59.385,63.906,44.211)
Image (generated by PyMOL):