Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2821:A2811
Extra
PDB:
ATOM 1 O3' C A2820 -44.794 -88.873 -33.236 1.00 0.01 O
ATOM 2 P G A2821 -43.519 -89.705 -33.718 1.00 0.01 P
ATOM 3 OP1 G A2821 -44.017 -90.750 -34.611 1.00 0.01 O
ATOM 4 OP2 G A2821 -42.748 -90.090 -32.517 1.00 0.01 O
ATOM 5 O5' G A2821 -42.705 -88.638 -34.549 1.00 0.01 O
ATOM 6 C5' G A2821 -43.259 -88.057 -35.705 1.00 0.01 C
ATOM 7 C4' G A2821 -42.308 -87.094 -36.339 1.00 0.01 C
ATOM 8 O4' G A2821 -42.161 -85.936 -35.501 1.00 0.01 O
ATOM 9 C3' G A2821 -40.891 -87.577 -36.509 1.00 0.01 C
ATOM 10 O3' G A2821 -40.727 -88.465 -37.574 1.00 0.01 O
ATOM 11 C2' G A2821 -40.155 -86.282 -36.687 1.00 0.01 C
ATOM 12 O2' G A2821 -40.414 -85.728 -37.963 1.00 0.01 O
ATOM 13 C1' G A2821 -40.852 -85.435 -35.636 1.00 0.01 C
ATOM 14 N9 G A2821 -40.183 -85.547 -34.343 1.00 0.01 N
ATOM 15 C8 G A2821 -40.659 -86.209 -33.278 1.00 0.01 C
ATOM 16 N7 G A2821 -39.868 -86.178 -32.268 1.00 0.01 N
ATOM 17 C5 G A2821 -38.795 -85.456 -32.722 1.00 0.01 C
ATOM 18 C6 G A2821 -37.616 -85.097 -32.036 1.00 0.01 C
ATOM 19 O6 G A2821 -37.292 -85.367 -30.856 1.00 0.01 O
ATOM 20 N1 G A2821 -36.792 -84.350 -32.871 1.00 0.01 N
ATOM 21 C2 G A2821 -37.053 -83.988 -34.160 1.00 0.01 C
ATOM 22 N2 G A2821 -36.092 -83.265 -34.759 1.00 0.01 N
ATOM 23 N3 G A2821 -38.154 -84.329 -34.789 1.00 0.01 N
ATOM 24 C4 G A2821 -38.970 -85.054 -34.008 1.00 0.01 C
ATOM 25 P A A2822 -39.405 -89.341 -37.665 1.00 0.01 P
ATOM 26 OP1 A A2822 -39.472 -90.099 -38.919 1.00 0.01 O
ATOM 27 OP2 A A2822 -39.276 -90.076 -36.392 1.00 0.01 O
ATOM 28 O5' A A2822 -38.282 -88.251 -37.766 1.00 0.01 O
TER
ATOM 1 O3' U B2810 -25.970 -82.359 -29.606 1.00 0.01 O
ATOM 2 P U B2811 -26.791 -81.106 -29.097 1.00 0.01 P
ATOM 3 OP1 U B2811 -25.845 -79.968 -29.056 1.00 0.01 O
ATOM 4 OP2 U B2811 -27.474 -81.516 -27.871 1.00 0.01 O
ATOM 5 O5' U B2811 -27.840 -80.900 -30.249 1.00 0.01 O
ATOM 6 C5' U B2811 -29.213 -80.799 -29.958 1.00 0.01 C
ATOM 7 C4' U B2811 -30.055 -81.197 -31.140 1.00 0.01 C
ATOM 8 O4' U B2811 -30.487 -82.558 -30.987 1.00 0.01 O
ATOM 9 C3' U B2811 -31.341 -80.419 -31.323 1.00 0.01 C
ATOM 10 O3' U B2811 -31.132 -79.214 -32.000 1.00 0.01 O
ATOM 11 C2' U B2811 -32.213 -81.381 -32.091 1.00 0.01 C
ATOM 12 O2' U B2811 -31.877 -81.352 -33.467 1.00 0.01 O
ATOM 13 C1' U B2811 -31.770 -82.718 -31.524 1.00 0.01 C
ATOM 14 N1 U B2811 -32.642 -83.211 -30.471 1.00 0.01 N
ATOM 15 C2 U B2811 -33.782 -83.855 -30.821 1.00 0.01 C
ATOM 16 O2 U B2811 -34.137 -83.963 -31.965 1.00 0.01 O
ATOM 17 N3 U B2811 -34.518 -84.340 -29.788 1.00 0.01 N
ATOM 18 C4 U B2811 -34.213 -84.270 -28.466 1.00 0.01 C
ATOM 19 O4 U B2811 -34.960 -84.746 -27.639 1.00 0.01 O
ATOM 20 C5 U B2811 -32.995 -83.619 -28.194 1.00 0.01 C
ATOM 21 C6 U B2811 -32.258 -83.135 -29.185 1.00 0.01 C
ATOM 22 P G B2812 -31.991 -77.948 -31.627 1.00 0.01 P
ATOM 23 OP1 G B2812 -31.238 -76.775 -32.060 1.00 0.01 O
ATOM 24 OP2 G B2812 -32.363 -78.066 -30.218 1.00 0.01 O
ATOM 25 O5' G B2812 -33.257 -78.134 -32.523 1.00 0.01 O
TER
ATOM 2 P G A2821 -43.519 -89.705 -33.718 1.00 0.01 P
ATOM 3 OP1 G A2821 -44.017 -90.750 -34.611 1.00 0.01 O
ATOM 4 OP2 G A2821 -42.748 -90.090 -32.517 1.00 0.01 O
ATOM 5 O5' G A2821 -42.705 -88.638 -34.549 1.00 0.01 O
ATOM 6 C5' G A2821 -43.259 -88.057 -35.705 1.00 0.01 C
ATOM 7 C4' G A2821 -42.308 -87.094 -36.339 1.00 0.01 C
ATOM 8 O4' G A2821 -42.161 -85.936 -35.501 1.00 0.01 O
ATOM 9 C3' G A2821 -40.891 -87.577 -36.509 1.00 0.01 C
ATOM 10 O3' G A2821 -40.727 -88.465 -37.574 1.00 0.01 O
ATOM 11 C2' G A2821 -40.155 -86.282 -36.687 1.00 0.01 C
ATOM 12 O2' G A2821 -40.414 -85.728 -37.963 1.00 0.01 O
ATOM 13 C1' G A2821 -40.852 -85.435 -35.636 1.00 0.01 C
ATOM 14 N9 G A2821 -40.183 -85.547 -34.343 1.00 0.01 N
ATOM 15 C8 G A2821 -40.659 -86.209 -33.278 1.00 0.01 C
ATOM 16 N7 G A2821 -39.868 -86.178 -32.268 1.00 0.01 N
ATOM 17 C5 G A2821 -38.795 -85.456 -32.722 1.00 0.01 C
ATOM 18 C6 G A2821 -37.616 -85.097 -32.036 1.00 0.01 C
ATOM 19 O6 G A2821 -37.292 -85.367 -30.856 1.00 0.01 O
ATOM 20 N1 G A2821 -36.792 -84.350 -32.871 1.00 0.01 N
ATOM 21 C2 G A2821 -37.053 -83.988 -34.160 1.00 0.01 C
ATOM 22 N2 G A2821 -36.092 -83.265 -34.759 1.00 0.01 N
ATOM 23 N3 G A2821 -38.154 -84.329 -34.789 1.00 0.01 N
ATOM 24 C4 G A2821 -38.970 -85.054 -34.008 1.00 0.01 C
ATOM 25 P A A2822 -39.405 -89.341 -37.665 1.00 0.01 P
ATOM 26 OP1 A A2822 -39.472 -90.099 -38.919 1.00 0.01 O
ATOM 27 OP2 A A2822 -39.276 -90.076 -36.392 1.00 0.01 O
ATOM 28 O5' A A2822 -38.282 -88.251 -37.766 1.00 0.01 O
TER
ATOM 1 O3' U B2810 -25.970 -82.359 -29.606 1.00 0.01 O
ATOM 2 P U B2811 -26.791 -81.106 -29.097 1.00 0.01 P
ATOM 3 OP1 U B2811 -25.845 -79.968 -29.056 1.00 0.01 O
ATOM 4 OP2 U B2811 -27.474 -81.516 -27.871 1.00 0.01 O
ATOM 5 O5' U B2811 -27.840 -80.900 -30.249 1.00 0.01 O
ATOM 6 C5' U B2811 -29.213 -80.799 -29.958 1.00 0.01 C
ATOM 7 C4' U B2811 -30.055 -81.197 -31.140 1.00 0.01 C
ATOM 8 O4' U B2811 -30.487 -82.558 -30.987 1.00 0.01 O
ATOM 9 C3' U B2811 -31.341 -80.419 -31.323 1.00 0.01 C
ATOM 10 O3' U B2811 -31.132 -79.214 -32.000 1.00 0.01 O
ATOM 11 C2' U B2811 -32.213 -81.381 -32.091 1.00 0.01 C
ATOM 12 O2' U B2811 -31.877 -81.352 -33.467 1.00 0.01 O
ATOM 13 C1' U B2811 -31.770 -82.718 -31.524 1.00 0.01 C
ATOM 14 N1 U B2811 -32.642 -83.211 -30.471 1.00 0.01 N
ATOM 15 C2 U B2811 -33.782 -83.855 -30.821 1.00 0.01 C
ATOM 16 O2 U B2811 -34.137 -83.963 -31.965 1.00 0.01 O
ATOM 17 N3 U B2811 -34.518 -84.340 -29.788 1.00 0.01 N
ATOM 18 C4 U B2811 -34.213 -84.270 -28.466 1.00 0.01 C
ATOM 19 O4 U B2811 -34.960 -84.746 -27.639 1.00 0.01 O
ATOM 20 C5 U B2811 -32.995 -83.619 -28.194 1.00 0.01 C
ATOM 21 C6 U B2811 -32.258 -83.135 -29.185 1.00 0.01 C
ATOM 22 P G B2812 -31.991 -77.948 -31.627 1.00 0.01 P
ATOM 23 OP1 G B2812 -31.238 -76.775 -32.060 1.00 0.01 O
ATOM 24 OP2 G B2812 -32.363 -78.066 -30.218 1.00 0.01 O
ATOM 25 O5' G B2812 -33.257 -78.134 -32.523 1.00 0.01 O
TER
Atoms:
OP1: (-44.017,-90.750,-34.611)
OP2: (-42.748,-90.090,-32.517)
C3': (-40.891,-87.577,-36.509)
C1': (-40.852,-85.435,-35.636)
C5': (-43.259,-88.057,-35.705)
O6: (-37.292,-85.367,-30.856)
O4': (-42.161,-85.936,-35.501)
C8: (-40.659,-86.209,-33.278)
C2: (-37.053,-83.988,-34.160)
C6: (-37.616,-85.097,-32.036)
C5: (-38.795,-85.456,-32.722)
C4: (-38.970,-85.054,-34.008)
P: (-43.519,-89.705,-33.718)
C4': (-42.308,-87.094,-36.339)
C2': (-40.155,-86.282,-36.687)
O2': (-40.414,-85.728,-37.963)
N1: (-36.792,-84.350,-32.871)
N2: (-36.092,-83.265,-34.759)
N3: (-38.154,-84.329,-34.789)
N7: (-39.868,-86.178,-32.268)
N9: (-40.183,-85.547,-34.343)
O5': (-42.705,-88.638,-34.549)
O3': (-40.727,-88.465,-37.574)
OP2: (-42.748,-90.090,-32.517)
C3': (-40.891,-87.577,-36.509)
C1': (-40.852,-85.435,-35.636)
C5': (-43.259,-88.057,-35.705)
O6: (-37.292,-85.367,-30.856)
O4': (-42.161,-85.936,-35.501)
C8: (-40.659,-86.209,-33.278)
C2: (-37.053,-83.988,-34.160)
C6: (-37.616,-85.097,-32.036)
C5: (-38.795,-85.456,-32.722)
C4: (-38.970,-85.054,-34.008)
P: (-43.519,-89.705,-33.718)
C4': (-42.308,-87.094,-36.339)
C2': (-40.155,-86.282,-36.687)
O2': (-40.414,-85.728,-37.963)
N1: (-36.792,-84.350,-32.871)
N2: (-36.092,-83.265,-34.759)
N3: (-38.154,-84.329,-34.789)
N7: (-39.868,-86.178,-32.268)
N9: (-40.183,-85.547,-34.343)
O5': (-42.705,-88.638,-34.549)
O3': (-40.727,-88.465,-37.574)
C4: (-34.213,-84.270,-28.466)
N3: (-34.518,-84.340,-29.788)
OP1: (-25.845,-79.968,-29.056)
OP2: (-27.474,-81.516,-27.871)
C2: (-33.782,-83.855,-30.821)
C1': (-31.770,-82.718,-31.524)
C3': (-31.341,-80.419,-31.323)
O5': (-27.840,-80.900,-30.249)
O4': (-30.487,-82.558,-30.987)
C5': (-29.213,-80.799,-29.958)
P: (-26.791,-81.106,-29.097)
C4': (-30.055,-81.197,-31.140)
C2': (-32.213,-81.381,-32.091)
O2': (-31.877,-81.352,-33.467)
N1: (-32.642,-83.211,-30.471)
O4: (-34.960,-84.746,-27.639)
O2: (-34.137,-83.963,-31.965)
C6: (-32.258,-83.135,-29.185)
C5: (-32.995,-83.619,-28.194)
O3': (-31.132,-79.214,-32.000)
N3: (-34.518,-84.340,-29.788)
OP1: (-25.845,-79.968,-29.056)
OP2: (-27.474,-81.516,-27.871)
C2: (-33.782,-83.855,-30.821)
C1': (-31.770,-82.718,-31.524)
C3': (-31.341,-80.419,-31.323)
O5': (-27.840,-80.900,-30.249)
O4': (-30.487,-82.558,-30.987)
C5': (-29.213,-80.799,-29.958)
P: (-26.791,-81.106,-29.097)
C4': (-30.055,-81.197,-31.140)
C2': (-32.213,-81.381,-32.091)
O2': (-31.877,-81.352,-33.467)
N1: (-32.642,-83.211,-30.471)
O4: (-34.960,-84.746,-27.639)
O2: (-34.137,-83.963,-31.965)
C6: (-32.258,-83.135,-29.185)
C5: (-32.995,-83.619,-28.194)
O3': (-31.132,-79.214,-32.000)
Image (generated by PyMOL):