Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2678:A2717
Extra
PDB:
ATOM 1 O3' U A2677 -42.112 -51.452 -47.971 1.00 0.01 O
ATOM 2 P G A2678 -41.110 -50.991 -46.822 1.00 0.01 P
ATOM 3 OP1 G A2678 -40.841 -49.569 -47.006 1.00 0.01 O
ATOM 4 OP2 G A2678 -39.999 -51.934 -46.805 1.00 0.01 O
ATOM 5 O5' G A2678 -41.947 -51.186 -45.545 1.00 0.01 O
ATOM 6 C5' G A2678 -41.306 -51.452 -44.336 1.00 0.01 C
ATOM 7 C4' G A2678 -42.282 -51.396 -43.213 1.00 0.01 C
ATOM 8 O4' G A2678 -43.305 -52.391 -43.409 1.00 0.01 O
ATOM 9 C3' G A2678 -41.729 -51.674 -41.845 1.00 0.01 C
ATOM 10 O3' G A2678 -41.101 -50.538 -41.315 1.00 0.01 O
ATOM 11 C2' G A2678 -42.976 -52.089 -41.103 1.00 0.01 C
ATOM 12 O2' G A2678 -43.770 -50.954 -40.806 1.00 0.01 O
ATOM 13 C1' G A2678 -43.701 -52.898 -42.180 1.00 0.01 C
ATOM 14 N9 G A2678 -43.346 -54.314 -42.161 1.00 0.01 N
ATOM 15 C8 G A2678 -42.599 -54.944 -43.085 1.00 0.01 C
ATOM 16 N7 G A2678 -42.453 -56.183 -42.817 1.00 0.01 N
ATOM 17 C5 G A2678 -43.173 -56.391 -41.666 1.00 0.01 C
ATOM 18 C6 G A2678 -43.385 -57.543 -40.899 1.00 0.01 C
ATOM 19 O6 G A2678 -42.973 -58.686 -41.087 1.00 0.01 O
ATOM 20 N1 G A2678 -44.171 -57.261 -39.816 1.00 0.01 N
ATOM 21 C2 G A2678 -44.696 -56.045 -39.493 1.00 0.01 C
ATOM 22 N2 G A2678 -45.461 -55.927 -38.413 1.00 0.01 N
ATOM 23 N3 G A2678 -44.510 -54.982 -40.188 1.00 0.01 N
ATOM 24 C4 G A2678 -43.746 -55.237 -41.258 1.00 0.01 C
ATOM 25 P G A2679 -40.137 -50.652 -40.065 1.00 0.01 P
ATOM 26 OP1 G A2679 -39.802 -49.284 -39.637 1.00 0.01 O
ATOM 27 OP2 G A2679 -39.037 -51.566 -40.434 1.00 0.01 O
ATOM 28 O5' G A2679 -41.070 -51.326 -38.994 1.00 0.01 O
TER
ATOM 1 O3' C B2716 -44.855 -66.386 -34.403 1.00 0.01 O
ATOM 2 P U B2717 -46.265 -65.902 -34.956 1.00 0.01 P
ATOM 3 OP1 U B2717 -47.288 -66.471 -34.064 1.00 0.01 O
ATOM 4 OP2 U B2717 -46.308 -66.230 -36.376 1.00 0.01 O
ATOM 5 O5' U B2717 -46.202 -64.356 -34.765 1.00 0.01 O
ATOM 6 C5' U B2717 -47.374 -63.602 -34.709 1.00 0.01 C
ATOM 7 C4' U B2717 -47.061 -62.155 -34.835 1.00 0.01 C
ATOM 8 O4' U B2717 -45.742 -62.014 -35.369 1.00 0.01 O
ATOM 9 C3' U B2717 -47.955 -61.392 -35.774 1.00 0.01 C
ATOM 10 O3' U B2717 -49.086 -60.889 -35.106 1.00 0.01 O
ATOM 11 C2' U B2717 -47.045 -60.313 -36.362 1.00 0.01 C
ATOM 12 O2' U B2717 -47.061 -59.137 -35.568 1.00 0.01 O
ATOM 13 C1' U B2717 -45.674 -60.936 -36.235 1.00 0.01 C
ATOM 14 N1 U B2717 -45.113 -61.390 -37.490 1.00 0.01 N
ATOM 15 C2 U B2717 -44.601 -60.364 -38.203 1.00 0.01 C
ATOM 16 O2 U B2717 -44.742 -59.243 -37.850 1.00 0.01 O
ATOM 17 N3 U B2717 -43.952 -60.668 -39.328 1.00 0.01 N
ATOM 18 C4 U B2717 -43.755 -61.929 -39.806 1.00 0.01 C
ATOM 19 O4 U B2717 -43.145 -61.990 -40.873 1.00 0.01 O
ATOM 20 C5 U B2717 -44.293 -63.003 -38.994 1.00 0.01 C
ATOM 21 C6 U B2717 -44.921 -62.695 -37.851 1.00 0.01 C
ATOM 22 P A B2718 -50.509 -60.958 -35.784 1.00 0.01 P
ATOM 23 OP1 A B2718 -51.484 -61.073 -34.719 1.00 0.01 O
ATOM 24 OP2 A B2718 -50.462 -61.985 -36.842 1.00 0.01 O
ATOM 25 O5' A B2718 -50.624 -59.563 -36.403 1.00 0.01 O
TER
ATOM 2 P G A2678 -41.110 -50.991 -46.822 1.00 0.01 P
ATOM 3 OP1 G A2678 -40.841 -49.569 -47.006 1.00 0.01 O
ATOM 4 OP2 G A2678 -39.999 -51.934 -46.805 1.00 0.01 O
ATOM 5 O5' G A2678 -41.947 -51.186 -45.545 1.00 0.01 O
ATOM 6 C5' G A2678 -41.306 -51.452 -44.336 1.00 0.01 C
ATOM 7 C4' G A2678 -42.282 -51.396 -43.213 1.00 0.01 C
ATOM 8 O4' G A2678 -43.305 -52.391 -43.409 1.00 0.01 O
ATOM 9 C3' G A2678 -41.729 -51.674 -41.845 1.00 0.01 C
ATOM 10 O3' G A2678 -41.101 -50.538 -41.315 1.00 0.01 O
ATOM 11 C2' G A2678 -42.976 -52.089 -41.103 1.00 0.01 C
ATOM 12 O2' G A2678 -43.770 -50.954 -40.806 1.00 0.01 O
ATOM 13 C1' G A2678 -43.701 -52.898 -42.180 1.00 0.01 C
ATOM 14 N9 G A2678 -43.346 -54.314 -42.161 1.00 0.01 N
ATOM 15 C8 G A2678 -42.599 -54.944 -43.085 1.00 0.01 C
ATOM 16 N7 G A2678 -42.453 -56.183 -42.817 1.00 0.01 N
ATOM 17 C5 G A2678 -43.173 -56.391 -41.666 1.00 0.01 C
ATOM 18 C6 G A2678 -43.385 -57.543 -40.899 1.00 0.01 C
ATOM 19 O6 G A2678 -42.973 -58.686 -41.087 1.00 0.01 O
ATOM 20 N1 G A2678 -44.171 -57.261 -39.816 1.00 0.01 N
ATOM 21 C2 G A2678 -44.696 -56.045 -39.493 1.00 0.01 C
ATOM 22 N2 G A2678 -45.461 -55.927 -38.413 1.00 0.01 N
ATOM 23 N3 G A2678 -44.510 -54.982 -40.188 1.00 0.01 N
ATOM 24 C4 G A2678 -43.746 -55.237 -41.258 1.00 0.01 C
ATOM 25 P G A2679 -40.137 -50.652 -40.065 1.00 0.01 P
ATOM 26 OP1 G A2679 -39.802 -49.284 -39.637 1.00 0.01 O
ATOM 27 OP2 G A2679 -39.037 -51.566 -40.434 1.00 0.01 O
ATOM 28 O5' G A2679 -41.070 -51.326 -38.994 1.00 0.01 O
TER
ATOM 1 O3' C B2716 -44.855 -66.386 -34.403 1.00 0.01 O
ATOM 2 P U B2717 -46.265 -65.902 -34.956 1.00 0.01 P
ATOM 3 OP1 U B2717 -47.288 -66.471 -34.064 1.00 0.01 O
ATOM 4 OP2 U B2717 -46.308 -66.230 -36.376 1.00 0.01 O
ATOM 5 O5' U B2717 -46.202 -64.356 -34.765 1.00 0.01 O
ATOM 6 C5' U B2717 -47.374 -63.602 -34.709 1.00 0.01 C
ATOM 7 C4' U B2717 -47.061 -62.155 -34.835 1.00 0.01 C
ATOM 8 O4' U B2717 -45.742 -62.014 -35.369 1.00 0.01 O
ATOM 9 C3' U B2717 -47.955 -61.392 -35.774 1.00 0.01 C
ATOM 10 O3' U B2717 -49.086 -60.889 -35.106 1.00 0.01 O
ATOM 11 C2' U B2717 -47.045 -60.313 -36.362 1.00 0.01 C
ATOM 12 O2' U B2717 -47.061 -59.137 -35.568 1.00 0.01 O
ATOM 13 C1' U B2717 -45.674 -60.936 -36.235 1.00 0.01 C
ATOM 14 N1 U B2717 -45.113 -61.390 -37.490 1.00 0.01 N
ATOM 15 C2 U B2717 -44.601 -60.364 -38.203 1.00 0.01 C
ATOM 16 O2 U B2717 -44.742 -59.243 -37.850 1.00 0.01 O
ATOM 17 N3 U B2717 -43.952 -60.668 -39.328 1.00 0.01 N
ATOM 18 C4 U B2717 -43.755 -61.929 -39.806 1.00 0.01 C
ATOM 19 O4 U B2717 -43.145 -61.990 -40.873 1.00 0.01 O
ATOM 20 C5 U B2717 -44.293 -63.003 -38.994 1.00 0.01 C
ATOM 21 C6 U B2717 -44.921 -62.695 -37.851 1.00 0.01 C
ATOM 22 P A B2718 -50.509 -60.958 -35.784 1.00 0.01 P
ATOM 23 OP1 A B2718 -51.484 -61.073 -34.719 1.00 0.01 O
ATOM 24 OP2 A B2718 -50.462 -61.985 -36.842 1.00 0.01 O
ATOM 25 O5' A B2718 -50.624 -59.563 -36.403 1.00 0.01 O
TER
Atoms:
OP1: (-40.841,-49.569,-47.006)
OP2: (-39.999,-51.934,-46.805)
C3': (-41.729,-51.674,-41.845)
C1': (-43.701,-52.898,-42.180)
C5': (-41.306,-51.452,-44.336)
O6: (-42.973,-58.686,-41.087)
O4': (-43.305,-52.391,-43.409)
C8: (-42.599,-54.944,-43.085)
C2: (-44.696,-56.045,-39.493)
C6: (-43.385,-57.543,-40.899)
C5: (-43.173,-56.391,-41.666)
C4: (-43.746,-55.237,-41.258)
P: (-41.110,-50.991,-46.822)
C4': (-42.282,-51.396,-43.213)
C2': (-42.976,-52.089,-41.103)
O2': (-43.770,-50.954,-40.806)
N1: (-44.171,-57.261,-39.816)
N2: (-45.461,-55.927,-38.413)
N3: (-44.510,-54.982,-40.188)
N7: (-42.453,-56.183,-42.817)
N9: (-43.346,-54.314,-42.161)
O5': (-41.947,-51.186,-45.545)
O3': (-41.101,-50.538,-41.315)
OP2: (-39.999,-51.934,-46.805)
C3': (-41.729,-51.674,-41.845)
C1': (-43.701,-52.898,-42.180)
C5': (-41.306,-51.452,-44.336)
O6: (-42.973,-58.686,-41.087)
O4': (-43.305,-52.391,-43.409)
C8: (-42.599,-54.944,-43.085)
C2: (-44.696,-56.045,-39.493)
C6: (-43.385,-57.543,-40.899)
C5: (-43.173,-56.391,-41.666)
C4: (-43.746,-55.237,-41.258)
P: (-41.110,-50.991,-46.822)
C4': (-42.282,-51.396,-43.213)
C2': (-42.976,-52.089,-41.103)
O2': (-43.770,-50.954,-40.806)
N1: (-44.171,-57.261,-39.816)
N2: (-45.461,-55.927,-38.413)
N3: (-44.510,-54.982,-40.188)
N7: (-42.453,-56.183,-42.817)
N9: (-43.346,-54.314,-42.161)
O5': (-41.947,-51.186,-45.545)
O3': (-41.101,-50.538,-41.315)
C4: (-43.755,-61.929,-39.806)
N3: (-43.952,-60.668,-39.328)
OP1: (-47.288,-66.471,-34.064)
OP2: (-46.308,-66.230,-36.376)
C2: (-44.601,-60.364,-38.203)
C1': (-45.674,-60.936,-36.235)
C3': (-47.955,-61.392,-35.774)
O5': (-46.202,-64.356,-34.765)
O4': (-45.742,-62.014,-35.369)
C5': (-47.374,-63.602,-34.709)
P: (-46.265,-65.902,-34.956)
C4': (-47.061,-62.155,-34.835)
C2': (-47.045,-60.313,-36.362)
O2': (-47.061,-59.137,-35.568)
N1: (-45.113,-61.390,-37.490)
O4: (-43.145,-61.990,-40.873)
O2: (-44.742,-59.243,-37.850)
C6: (-44.921,-62.695,-37.851)
C5: (-44.293,-63.003,-38.994)
O3': (-49.086,-60.889,-35.106)
N3: (-43.952,-60.668,-39.328)
OP1: (-47.288,-66.471,-34.064)
OP2: (-46.308,-66.230,-36.376)
C2: (-44.601,-60.364,-38.203)
C1': (-45.674,-60.936,-36.235)
C3': (-47.955,-61.392,-35.774)
O5': (-46.202,-64.356,-34.765)
O4': (-45.742,-62.014,-35.369)
C5': (-47.374,-63.602,-34.709)
P: (-46.265,-65.902,-34.956)
C4': (-47.061,-62.155,-34.835)
C2': (-47.045,-60.313,-36.362)
O2': (-47.061,-59.137,-35.568)
N1: (-45.113,-61.390,-37.490)
O4: (-43.145,-61.990,-40.873)
O2: (-44.742,-59.243,-37.850)
C6: (-44.921,-62.695,-37.851)
C5: (-44.293,-63.003,-38.994)
O3': (-49.086,-60.889,-35.106)
Image (generated by PyMOL):