Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIL:A84:A108
Extra
PDB:
ATOM 1 O3' G A 83 18.113 28.078 10.599 1.00 18.76 O
ATOM 2 P G A 84 16.683 27.967 9.883 1.00 19.34 P
ATOM 3 OP1 G A 84 16.259 29.332 9.503 1.00 20.02 O
ATOM 4 OP2 G A 84 15.805 27.130 10.723 1.00 19.53 O
ATOM 5 O5' G A 84 16.983 27.135 8.551 1.00 19.33 O
ATOM 6 C5' G A 84 17.825 27.646 7.519 1.00 19.28 C
ATOM 7 C4' G A 84 18.003 26.607 6.431 1.00 19.09 C
ATOM 8 O4' G A 84 18.561 25.383 6.979 1.00 18.80 O
ATOM 9 C3' G A 84 16.704 26.166 5.776 1.00 19.19 C
ATOM 10 O3' G A 84 16.320 27.083 4.757 1.00 19.35 O
ATOM 11 C2' G A 84 17.084 24.797 5.223 1.00 18.73 C
ATOM 12 O2' G A 84 17.835 24.858 4.028 1.00 18.87 O
ATOM 13 C1' G A 84 17.955 24.261 6.354 1.00 18.19 C
ATOM 14 N9 G A 84 17.218 23.470 7.349 1.00 17.49 N
ATOM 15 C8 G A 84 16.932 23.820 8.647 1.00 17.09 C
ATOM 16 N7 G A 84 16.266 22.908 9.303 1.00 17.08 N
ATOM 17 C5 G A 84 16.096 21.884 8.381 1.00 17.12 C
ATOM 18 C6 G A 84 15.448 20.628 8.511 1.00 17.24 C
ATOM 19 O6 G A 84 14.874 20.165 9.504 1.00 17.30 O
ATOM 20 N1 G A 84 15.497 19.884 7.329 1.00 16.89 N
ATOM 21 C2 G A 84 16.106 20.302 6.164 1.00 17.00 C
ATOM 22 N2 G A 84 16.064 19.459 5.119 1.00 16.70 N
ATOM 23 N3 G A 84 16.719 21.472 6.033 1.00 16.85 N
ATOM 24 C4 G A 84 16.677 22.214 7.173 1.00 17.24 C
ATOM 25 P U A 85 14.778 27.473 4.576 1.00 19.15 P
ATOM 26 OP1 U A 85 14.703 28.497 3.510 1.00 19.49 O
ATOM 27 OP2 U A 85 14.184 27.743 5.899 1.00 19.12 O
ATOM 28 O5' U A 85 14.118 26.120 4.040 1.00 18.88 O
TER
ATOM 1 O3' A B 107 9.676 11.815 10.581 1.00 21.82 O
ATOM 2 P U B 108 11.150 11.222 10.804 1.00 23.05 P
ATOM 3 OP1 U B 108 11.066 9.764 10.555 1.00 23.27 O
ATOM 4 OP2 U B 108 11.670 11.716 12.096 1.00 22.38 O
ATOM 5 O5' U B 108 12.013 11.907 9.643 1.00 23.89 O
ATOM 6 C5' U B 108 11.794 11.579 8.267 1.00 24.70 C
ATOM 7 C4' U B 108 12.529 12.554 7.365 1.00 25.43 C
ATOM 8 O4' U B 108 12.074 13.901 7.645 1.00 24.99 O
ATOM 9 C3' U B 108 14.038 12.616 7.567 1.00 26.50 C
ATOM 10 O3' U B 108 14.681 11.578 6.830 1.00 29.63 O
ATOM 11 C2' U B 108 14.371 14.013 7.044 1.00 25.27 C
ATOM 12 O2' U B 108 14.497 14.081 5.636 1.00 25.02 O
ATOM 13 C1' U B 108 13.148 14.813 7.491 1.00 23.93 C
ATOM 14 N1 U B 108 13.365 15.597 8.758 1.00 22.84 N
ATOM 15 C2 U B 108 13.932 16.861 8.672 1.00 22.06 C
ATOM 16 O2 U B 108 14.265 17.382 7.621 1.00 21.53 O
ATOM 17 N3 U B 108 14.098 17.503 9.878 1.00 21.45 N
ATOM 18 C4 U B 108 13.760 17.022 11.132 1.00 21.71 C
ATOM 19 O4 U B 108 13.967 17.713 12.123 1.00 21.98 O
ATOM 20 C5 U B 108 13.176 15.702 11.146 1.00 21.85 C
ATOM 21 C6 U B 108 13.007 15.055 9.984 1.00 22.17 C
ATOM 22 P G B 109 15.382 10.342 7.572 1.00 32.02 P
ATOM 23 OP1 G B 109 15.625 9.311 6.538 1.00 31.94 O
ATOM 24 OP2 G B 109 14.627 9.989 8.794 1.00 32.13 O
ATOM 25 O5' G B 109 16.765 10.969 8.073 1.00 33.78 O
TER
ATOM 2 P G A 84 16.683 27.967 9.883 1.00 19.34 P
ATOM 3 OP1 G A 84 16.259 29.332 9.503 1.00 20.02 O
ATOM 4 OP2 G A 84 15.805 27.130 10.723 1.00 19.53 O
ATOM 5 O5' G A 84 16.983 27.135 8.551 1.00 19.33 O
ATOM 6 C5' G A 84 17.825 27.646 7.519 1.00 19.28 C
ATOM 7 C4' G A 84 18.003 26.607 6.431 1.00 19.09 C
ATOM 8 O4' G A 84 18.561 25.383 6.979 1.00 18.80 O
ATOM 9 C3' G A 84 16.704 26.166 5.776 1.00 19.19 C
ATOM 10 O3' G A 84 16.320 27.083 4.757 1.00 19.35 O
ATOM 11 C2' G A 84 17.084 24.797 5.223 1.00 18.73 C
ATOM 12 O2' G A 84 17.835 24.858 4.028 1.00 18.87 O
ATOM 13 C1' G A 84 17.955 24.261 6.354 1.00 18.19 C
ATOM 14 N9 G A 84 17.218 23.470 7.349 1.00 17.49 N
ATOM 15 C8 G A 84 16.932 23.820 8.647 1.00 17.09 C
ATOM 16 N7 G A 84 16.266 22.908 9.303 1.00 17.08 N
ATOM 17 C5 G A 84 16.096 21.884 8.381 1.00 17.12 C
ATOM 18 C6 G A 84 15.448 20.628 8.511 1.00 17.24 C
ATOM 19 O6 G A 84 14.874 20.165 9.504 1.00 17.30 O
ATOM 20 N1 G A 84 15.497 19.884 7.329 1.00 16.89 N
ATOM 21 C2 G A 84 16.106 20.302 6.164 1.00 17.00 C
ATOM 22 N2 G A 84 16.064 19.459 5.119 1.00 16.70 N
ATOM 23 N3 G A 84 16.719 21.472 6.033 1.00 16.85 N
ATOM 24 C4 G A 84 16.677 22.214 7.173 1.00 17.24 C
ATOM 25 P U A 85 14.778 27.473 4.576 1.00 19.15 P
ATOM 26 OP1 U A 85 14.703 28.497 3.510 1.00 19.49 O
ATOM 27 OP2 U A 85 14.184 27.743 5.899 1.00 19.12 O
ATOM 28 O5' U A 85 14.118 26.120 4.040 1.00 18.88 O
TER
ATOM 1 O3' A B 107 9.676 11.815 10.581 1.00 21.82 O
ATOM 2 P U B 108 11.150 11.222 10.804 1.00 23.05 P
ATOM 3 OP1 U B 108 11.066 9.764 10.555 1.00 23.27 O
ATOM 4 OP2 U B 108 11.670 11.716 12.096 1.00 22.38 O
ATOM 5 O5' U B 108 12.013 11.907 9.643 1.00 23.89 O
ATOM 6 C5' U B 108 11.794 11.579 8.267 1.00 24.70 C
ATOM 7 C4' U B 108 12.529 12.554 7.365 1.00 25.43 C
ATOM 8 O4' U B 108 12.074 13.901 7.645 1.00 24.99 O
ATOM 9 C3' U B 108 14.038 12.616 7.567 1.00 26.50 C
ATOM 10 O3' U B 108 14.681 11.578 6.830 1.00 29.63 O
ATOM 11 C2' U B 108 14.371 14.013 7.044 1.00 25.27 C
ATOM 12 O2' U B 108 14.497 14.081 5.636 1.00 25.02 O
ATOM 13 C1' U B 108 13.148 14.813 7.491 1.00 23.93 C
ATOM 14 N1 U B 108 13.365 15.597 8.758 1.00 22.84 N
ATOM 15 C2 U B 108 13.932 16.861 8.672 1.00 22.06 C
ATOM 16 O2 U B 108 14.265 17.382 7.621 1.00 21.53 O
ATOM 17 N3 U B 108 14.098 17.503 9.878 1.00 21.45 N
ATOM 18 C4 U B 108 13.760 17.022 11.132 1.00 21.71 C
ATOM 19 O4 U B 108 13.967 17.713 12.123 1.00 21.98 O
ATOM 20 C5 U B 108 13.176 15.702 11.146 1.00 21.85 C
ATOM 21 C6 U B 108 13.007 15.055 9.984 1.00 22.17 C
ATOM 22 P G B 109 15.382 10.342 7.572 1.00 32.02 P
ATOM 23 OP1 G B 109 15.625 9.311 6.538 1.00 31.94 O
ATOM 24 OP2 G B 109 14.627 9.989 8.794 1.00 32.13 O
ATOM 25 O5' G B 109 16.765 10.969 8.073 1.00 33.78 O
TER
Atoms:
OP1: (16.259,29.332,9.503)
OP2: (15.805,27.130,10.723)
C3': (16.704,26.166,5.776)
C1': (17.955,24.261,6.354)
C5': (17.825,27.646,7.519)
O6: (14.874,20.165,9.504)
O4': (18.561,25.383,6.979)
C8: (16.932,23.820,8.647)
C2: (16.106,20.302,6.164)
C6: (15.448,20.628,8.511)
C5: (16.096,21.884,8.381)
C4: (16.677,22.214,7.173)
P: (16.683,27.967,9.883)
C4': (18.003,26.607,6.431)
C2': (17.084,24.797,5.223)
O2': (17.835,24.858,4.028)
N1: (15.497,19.884,7.329)
N2: (16.064,19.459,5.119)
N3: (16.719,21.472,6.033)
N7: (16.266,22.908,9.303)
N9: (17.218,23.470,7.349)
O5': (16.983,27.135,8.551)
O3': (16.320,27.083,4.757)
OP2: (15.805,27.130,10.723)
C3': (16.704,26.166,5.776)
C1': (17.955,24.261,6.354)
C5': (17.825,27.646,7.519)
O6: (14.874,20.165,9.504)
O4': (18.561,25.383,6.979)
C8: (16.932,23.820,8.647)
C2: (16.106,20.302,6.164)
C6: (15.448,20.628,8.511)
C5: (16.096,21.884,8.381)
C4: (16.677,22.214,7.173)
P: (16.683,27.967,9.883)
C4': (18.003,26.607,6.431)
C2': (17.084,24.797,5.223)
O2': (17.835,24.858,4.028)
N1: (15.497,19.884,7.329)
N2: (16.064,19.459,5.119)
N3: (16.719,21.472,6.033)
N7: (16.266,22.908,9.303)
N9: (17.218,23.470,7.349)
O5': (16.983,27.135,8.551)
O3': (16.320,27.083,4.757)
C4: (13.760,17.022,11.132)
N3: (14.098,17.503,9.878)
OP1: (11.066,9.764,10.555)
OP2: (11.670,11.716,12.096)
C2: (13.932,16.861,8.672)
C1': (13.148,14.813,7.491)
C3': (14.038,12.616,7.567)
O5': (12.013,11.907,9.643)
O4': (12.074,13.901,7.645)
C5': (11.794,11.579,8.267)
P: (11.150,11.222,10.804)
C4': (12.529,12.554,7.365)
C2': (14.371,14.013,7.044)
O2': (14.497,14.081,5.636)
N1: (13.365,15.597,8.758)
O4: (13.967,17.713,12.123)
O2: (14.265,17.382,7.621)
C6: (13.007,15.055,9.984)
C5: (13.176,15.702,11.146)
O3': (14.681,11.578,6.830)
N3: (14.098,17.503,9.878)
OP1: (11.066,9.764,10.555)
OP2: (11.670,11.716,12.096)
C2: (13.932,16.861,8.672)
C1': (13.148,14.813,7.491)
C3': (14.038,12.616,7.567)
O5': (12.013,11.907,9.643)
O4': (12.074,13.901,7.645)
C5': (11.794,11.579,8.267)
P: (11.150,11.222,10.804)
C4': (12.529,12.554,7.365)
C2': (14.371,14.013,7.044)
O2': (14.497,14.081,5.636)
N1: (13.365,15.597,8.758)
O4: (13.967,17.713,12.123)
O2: (14.265,17.382,7.621)
C6: (13.007,15.055,9.984)
C5: (13.176,15.702,11.146)
O3': (14.681,11.578,6.830)
Image (generated by PyMOL):