Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2597:A2563
Extra
PDB:
ATOM 1 O3' A A2596 59.794 172.519 128.875 1.00 47.84 O
ATOM 2 P G A2597 59.789 171.027 129.483 1.00 47.35 P
ATOM 3 OP1 G A2597 58.645 170.869 130.417 1.00 45.19 O
ATOM 4 OP2 G A2597 61.175 170.718 129.952 1.00 48.60 O
ATOM 5 O5' G A2597 59.480 170.115 128.219 1.00 46.91 O
ATOM 6 C5' G A2597 58.293 170.336 127.427 1.00 45.53 C
ATOM 7 C4' G A2597 58.422 169.624 126.104 1.00 44.77 C
ATOM 8 O4' G A2597 59.527 170.208 125.369 1.00 45.33 O
ATOM 9 C3' G A2597 58.745 168.147 126.214 1.00 42.74 C
ATOM 10 O3' G A2597 57.535 167.403 126.326 1.00 42.14 O
ATOM 11 C2' G A2597 59.507 167.865 124.930 1.00 42.88 C
ATOM 12 O2' G A2597 58.652 167.574 123.856 1.00 43.63 O
ATOM 13 C1' G A2597 60.239 169.192 124.696 1.00 45.39 C
ATOM 14 N9 G A2597 61.612 169.209 125.185 1.00 46.90 N
ATOM 15 C8 G A2597 62.061 169.786 126.349 1.00 47.59 C
ATOM 16 N7 G A2597 63.338 169.595 126.559 1.00 48.58 N
ATOM 17 C5 G A2597 63.762 168.846 125.470 1.00 47.22 C
ATOM 18 C6 G A2597 65.033 168.322 125.173 1.00 46.44 C
ATOM 19 O6 G A2597 66.057 168.366 125.860 1.00 44.26 O
ATOM 20 N1 G A2597 65.043 167.673 123.941 1.00 46.93 N
ATOM 21 C2 G A2597 63.960 167.537 123.107 1.00 46.64 C
ATOM 22 N2 G A2597 64.183 166.930 121.941 1.00 46.72 N
ATOM 23 N3 G A2597 62.750 167.982 123.395 1.00 47.42 N
ATOM 24 C4 G A2597 62.721 168.627 124.588 1.00 47.86 C
ATOM 25 P C A2598 57.537 165.967 127.061 1.00 43.54 P
ATOM 26 OP1 C A2598 56.165 165.373 126.983 1.00 44.82 O
ATOM 27 OP2 C A2598 58.203 166.085 128.368 1.00 43.17 O
ATOM 28 O5' C A2598 58.496 165.072 126.160 1.00 43.81 O
TER
ATOM 1 O3' G B2562 74.744 164.403 124.451 1.00 36.54 O
ATOM 2 P U B2563 74.770 165.735 123.599 1.00 36.96 P
ATOM 3 OP1 U B2563 75.945 165.657 122.736 1.00 37.49 O
ATOM 4 OP2 U B2563 74.667 166.788 124.606 1.00 37.24 O
ATOM 5 O5' U B2563 73.414 165.733 122.758 1.00 38.39 O
ATOM 6 C5' U B2563 73.156 164.786 121.704 1.00 38.63 C
ATOM 7 C4' U B2563 71.735 164.944 121.223 1.00 39.31 C
ATOM 8 O4' U B2563 70.838 164.819 122.353 1.00 41.13 O
ATOM 9 C3' U B2563 71.456 166.318 120.649 1.00 39.41 C
ATOM 10 O3' U B2563 71.745 166.244 119.265 1.00 37.43 O
ATOM 11 C2' U B2563 69.971 166.517 120.918 1.00 40.85 C
ATOM 12 O2' U B2563 69.165 165.941 119.919 1.00 42.19 O
ATOM 13 C1' U B2563 69.790 165.763 122.241 1.00 42.72 C
ATOM 14 N1 U B2563 69.816 166.615 123.438 1.00 45.29 N
ATOM 15 C2 U B2563 68.602 167.063 123.912 1.00 46.26 C
ATOM 16 O2 U B2563 67.542 166.746 123.399 1.00 46.16 O
ATOM 17 N3 U B2563 68.676 167.890 125.008 1.00 47.35 N
ATOM 18 C4 U B2563 69.826 168.296 125.669 1.00 48.57 C
ATOM 19 O4 U B2563 69.741 169.146 126.553 1.00 50.13 O
ATOM 20 C5 U B2563 71.049 167.764 125.136 1.00 47.11 C
ATOM 21 C6 U B2563 71.007 166.966 124.066 1.00 46.00 C
ATOM 22 P G B2564 72.150 167.555 118.451 1.00 35.83 P
ATOM 23 OP1 G B2564 71.984 167.211 117.025 1.00 31.27 O
ATOM 24 OP2 G B2564 73.467 168.028 118.940 1.00 35.31 O
ATOM 25 O5' G B2564 71.006 168.596 118.819 1.00 36.50 O
TER
ATOM 2 P G A2597 59.789 171.027 129.483 1.00 47.35 P
ATOM 3 OP1 G A2597 58.645 170.869 130.417 1.00 45.19 O
ATOM 4 OP2 G A2597 61.175 170.718 129.952 1.00 48.60 O
ATOM 5 O5' G A2597 59.480 170.115 128.219 1.00 46.91 O
ATOM 6 C5' G A2597 58.293 170.336 127.427 1.00 45.53 C
ATOM 7 C4' G A2597 58.422 169.624 126.104 1.00 44.77 C
ATOM 8 O4' G A2597 59.527 170.208 125.369 1.00 45.33 O
ATOM 9 C3' G A2597 58.745 168.147 126.214 1.00 42.74 C
ATOM 10 O3' G A2597 57.535 167.403 126.326 1.00 42.14 O
ATOM 11 C2' G A2597 59.507 167.865 124.930 1.00 42.88 C
ATOM 12 O2' G A2597 58.652 167.574 123.856 1.00 43.63 O
ATOM 13 C1' G A2597 60.239 169.192 124.696 1.00 45.39 C
ATOM 14 N9 G A2597 61.612 169.209 125.185 1.00 46.90 N
ATOM 15 C8 G A2597 62.061 169.786 126.349 1.00 47.59 C
ATOM 16 N7 G A2597 63.338 169.595 126.559 1.00 48.58 N
ATOM 17 C5 G A2597 63.762 168.846 125.470 1.00 47.22 C
ATOM 18 C6 G A2597 65.033 168.322 125.173 1.00 46.44 C
ATOM 19 O6 G A2597 66.057 168.366 125.860 1.00 44.26 O
ATOM 20 N1 G A2597 65.043 167.673 123.941 1.00 46.93 N
ATOM 21 C2 G A2597 63.960 167.537 123.107 1.00 46.64 C
ATOM 22 N2 G A2597 64.183 166.930 121.941 1.00 46.72 N
ATOM 23 N3 G A2597 62.750 167.982 123.395 1.00 47.42 N
ATOM 24 C4 G A2597 62.721 168.627 124.588 1.00 47.86 C
ATOM 25 P C A2598 57.537 165.967 127.061 1.00 43.54 P
ATOM 26 OP1 C A2598 56.165 165.373 126.983 1.00 44.82 O
ATOM 27 OP2 C A2598 58.203 166.085 128.368 1.00 43.17 O
ATOM 28 O5' C A2598 58.496 165.072 126.160 1.00 43.81 O
TER
ATOM 1 O3' G B2562 74.744 164.403 124.451 1.00 36.54 O
ATOM 2 P U B2563 74.770 165.735 123.599 1.00 36.96 P
ATOM 3 OP1 U B2563 75.945 165.657 122.736 1.00 37.49 O
ATOM 4 OP2 U B2563 74.667 166.788 124.606 1.00 37.24 O
ATOM 5 O5' U B2563 73.414 165.733 122.758 1.00 38.39 O
ATOM 6 C5' U B2563 73.156 164.786 121.704 1.00 38.63 C
ATOM 7 C4' U B2563 71.735 164.944 121.223 1.00 39.31 C
ATOM 8 O4' U B2563 70.838 164.819 122.353 1.00 41.13 O
ATOM 9 C3' U B2563 71.456 166.318 120.649 1.00 39.41 C
ATOM 10 O3' U B2563 71.745 166.244 119.265 1.00 37.43 O
ATOM 11 C2' U B2563 69.971 166.517 120.918 1.00 40.85 C
ATOM 12 O2' U B2563 69.165 165.941 119.919 1.00 42.19 O
ATOM 13 C1' U B2563 69.790 165.763 122.241 1.00 42.72 C
ATOM 14 N1 U B2563 69.816 166.615 123.438 1.00 45.29 N
ATOM 15 C2 U B2563 68.602 167.063 123.912 1.00 46.26 C
ATOM 16 O2 U B2563 67.542 166.746 123.399 1.00 46.16 O
ATOM 17 N3 U B2563 68.676 167.890 125.008 1.00 47.35 N
ATOM 18 C4 U B2563 69.826 168.296 125.669 1.00 48.57 C
ATOM 19 O4 U B2563 69.741 169.146 126.553 1.00 50.13 O
ATOM 20 C5 U B2563 71.049 167.764 125.136 1.00 47.11 C
ATOM 21 C6 U B2563 71.007 166.966 124.066 1.00 46.00 C
ATOM 22 P G B2564 72.150 167.555 118.451 1.00 35.83 P
ATOM 23 OP1 G B2564 71.984 167.211 117.025 1.00 31.27 O
ATOM 24 OP2 G B2564 73.467 168.028 118.940 1.00 35.31 O
ATOM 25 O5' G B2564 71.006 168.596 118.819 1.00 36.50 O
TER
Atoms:
OP1: (58.645,170.869,130.417)
OP2: (61.175,170.718,129.952)
C3': (58.745,168.147,126.214)
C1': (60.239,169.192,124.696)
C5': (58.293,170.336,127.427)
O6: (66.057,168.366,125.860)
O4': (59.527,170.208,125.369)
C8: (62.061,169.786,126.349)
C2: (63.960,167.537,123.107)
C6: (65.033,168.322,125.173)
C5: (63.762,168.846,125.470)
C4: (62.721,168.627,124.588)
P: (59.789,171.027,129.483)
C4': (58.422,169.624,126.104)
C2': (59.507,167.865,124.930)
O2': (58.652,167.574,123.856)
N1: (65.043,167.673,123.941)
N2: (64.183,166.930,121.941)
N3: (62.750,167.982,123.395)
N7: (63.338,169.595,126.559)
N9: (61.612,169.209,125.185)
O5': (59.480,170.115,128.219)
O3': (57.535,167.403,126.326)
OP2: (61.175,170.718,129.952)
C3': (58.745,168.147,126.214)
C1': (60.239,169.192,124.696)
C5': (58.293,170.336,127.427)
O6: (66.057,168.366,125.860)
O4': (59.527,170.208,125.369)
C8: (62.061,169.786,126.349)
C2: (63.960,167.537,123.107)
C6: (65.033,168.322,125.173)
C5: (63.762,168.846,125.470)
C4: (62.721,168.627,124.588)
P: (59.789,171.027,129.483)
C4': (58.422,169.624,126.104)
C2': (59.507,167.865,124.930)
O2': (58.652,167.574,123.856)
N1: (65.043,167.673,123.941)
N2: (64.183,166.930,121.941)
N3: (62.750,167.982,123.395)
N7: (63.338,169.595,126.559)
N9: (61.612,169.209,125.185)
O5': (59.480,170.115,128.219)
O3': (57.535,167.403,126.326)
C4: (69.826,168.296,125.669)
N3: (68.676,167.890,125.008)
OP1: (75.945,165.657,122.736)
OP2: (74.667,166.788,124.606)
C2: (68.602,167.063,123.912)
C1': (69.790,165.763,122.241)
C3': (71.456,166.318,120.649)
O5': (73.414,165.733,122.758)
O4': (70.838,164.819,122.353)
C5': (73.156,164.786,121.704)
P: (74.770,165.735,123.599)
C4': (71.735,164.944,121.223)
C2': (69.971,166.517,120.918)
O2': (69.165,165.941,119.919)
N1: (69.816,166.615,123.438)
O4: (69.741,169.146,126.553)
O2: (67.542,166.746,123.399)
C6: (71.007,166.966,124.066)
C5: (71.049,167.764,125.136)
O3': (71.745,166.244,119.265)
N3: (68.676,167.890,125.008)
OP1: (75.945,165.657,122.736)
OP2: (74.667,166.788,124.606)
C2: (68.602,167.063,123.912)
C1': (69.790,165.763,122.241)
C3': (71.456,166.318,120.649)
O5': (73.414,165.733,122.758)
O4': (70.838,164.819,122.353)
C5': (73.156,164.786,121.704)
P: (74.770,165.735,123.599)
C4': (71.735,164.944,121.223)
C2': (69.971,166.517,120.918)
O2': (69.165,165.941,119.919)
N1: (69.816,166.615,123.438)
O4: (69.741,169.146,126.553)
O2: (67.542,166.746,123.399)
C6: (71.007,166.966,124.066)
C5: (71.049,167.764,125.136)
O3': (71.745,166.244,119.265)
Image (generated by PyMOL):