Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A635:A709
Extra
PDB:
ATOM 1 O3' A A 634 56.836 38.445 -13.859 1.00 60.92 O
ATOM 2 P G A 635 56.235 38.719 -12.407 1.00 63.30 P
ATOM 3 OP1 G A 635 54.832 39.173 -12.627 1.00 68.30 O
ATOM 4 OP2 G A 635 57.197 39.595 -11.677 1.00 66.52 O
ATOM 5 O5' G A 635 56.221 37.282 -11.715 1.00 67.27 O
ATOM 6 C5' G A 635 57.047 37.002 -10.590 1.00 65.77 C
ATOM 7 C4' G A 635 56.336 36.080 -9.618 1.00 71.79 C
ATOM 8 O4' G A 635 55.183 36.756 -9.035 1.00 72.75 O
ATOM 9 C3' G A 635 55.740 34.801 -10.177 1.00 69.19 C
ATOM 10 O3' G A 635 56.662 33.754 -10.362 1.00 63.60 O
ATOM 11 C2' G A 635 54.709 34.437 -9.124 1.00 70.46 C
ATOM 12 O2' G A 635 55.306 33.807 -8.009 1.00 64.59 O
ATOM 13 C1' G A 635 54.156 35.813 -8.763 1.00 69.67 C
ATOM 14 N9 G A 635 53.045 36.078 -9.667 1.00 68.81 N
ATOM 15 C8 G A 635 53.048 36.895 -10.768 1.00 74.85 C
ATOM 16 N7 G A 635 51.941 36.836 -11.449 1.00 79.55 N
ATOM 17 C5 G A 635 51.152 35.948 -10.740 1.00 74.55 C
ATOM 18 C6 G A 635 49.850 35.477 -11.001 1.00 76.55 C
ATOM 19 O6 G A 635 49.105 35.755 -11.952 1.00 76.52 O
ATOM 20 N1 G A 635 49.426 34.586 -10.025 1.00 77.70 N
ATOM 21 C2 G A 635 50.166 34.194 -8.937 1.00 77.23 C
ATOM 22 N2 G A 635 49.579 33.317 -8.100 1.00 76.63 N
ATOM 23 N3 G A 635 51.387 34.628 -8.685 1.00 77.19 N
ATOM 24 C4 G A 635 51.813 35.493 -9.623 1.00 72.63 C
ATOM 25 P G A 636 56.259 32.553 -11.341 1.00 70.89 P
ATOM 26 OP1 G A 636 57.348 31.540 -11.345 1.00 73.77 O
ATOM 27 OP2 G A 636 55.865 33.205 -12.616 1.00 72.47 O
ATOM 28 O5' G A 636 54.937 31.927 -10.689 1.00 70.23 O
TER
ATOM 1 O3' C B 708 39.791 31.252 -14.104 1.00 70.57 O
ATOM 2 P U B 709 39.511 32.520 -13.159 1.00 80.34 P
ATOM 3 OP1 U B 709 38.286 32.234 -12.356 1.00 78.79 O
ATOM 4 OP2 U B 709 39.554 33.715 -14.045 1.00 66.25 O
ATOM 5 O5' U B 709 40.775 32.591 -12.181 1.00 81.07 O
ATOM 6 C5' U B 709 40.930 31.664 -11.099 1.00 73.76 C
ATOM 7 C4' U B 709 42.183 31.964 -10.298 1.00 73.69 C
ATOM 8 O4' U B 709 43.354 31.836 -11.141 1.00 70.06 O
ATOM 9 C3' U B 709 42.311 33.346 -9.670 1.00 75.88 C
ATOM 10 O3' U B 709 41.661 33.376 -8.409 1.00 75.03 O
ATOM 11 C2' U B 709 43.815 33.500 -9.493 1.00 73.67 C
ATOM 12 O2' U B 709 44.268 32.856 -8.321 1.00 74.75 O
ATOM 13 C1' U B 709 44.356 32.731 -10.698 1.00 70.09 C
ATOM 14 N1 U B 709 44.749 33.581 -11.826 1.00 70.17 N
ATOM 15 C2 U B 709 45.963 34.228 -11.758 1.00 71.97 C
ATOM 16 O2 U B 709 46.695 34.167 -10.792 1.00 72.58 O
ATOM 17 N3 U B 709 46.287 34.957 -12.869 1.00 70.41 N
ATOM 18 C4 U B 709 45.534 35.104 -14.010 1.00 68.81 C
ATOM 19 O4 U B 709 46.024 35.664 -14.988 1.00 66.21 O
ATOM 20 C5 U B 709 44.278 34.431 -13.982 1.00 72.00 C
ATOM 21 C6 U B 709 43.941 33.709 -12.921 1.00 70.89 C
ATOM 22 P G B 710 41.651 34.732 -7.549 1.00 78.59 P
ATOM 23 OP1 G B 710 40.459 34.652 -6.648 1.00 70.35 O
ATOM 24 OP2 G B 710 41.802 35.883 -8.483 1.00 73.52 O
ATOM 25 O5' G B 710 43.003 34.662 -6.705 1.00 74.51 O
TER
ATOM 2 P G A 635 56.235 38.719 -12.407 1.00 63.30 P
ATOM 3 OP1 G A 635 54.832 39.173 -12.627 1.00 68.30 O
ATOM 4 OP2 G A 635 57.197 39.595 -11.677 1.00 66.52 O
ATOM 5 O5' G A 635 56.221 37.282 -11.715 1.00 67.27 O
ATOM 6 C5' G A 635 57.047 37.002 -10.590 1.00 65.77 C
ATOM 7 C4' G A 635 56.336 36.080 -9.618 1.00 71.79 C
ATOM 8 O4' G A 635 55.183 36.756 -9.035 1.00 72.75 O
ATOM 9 C3' G A 635 55.740 34.801 -10.177 1.00 69.19 C
ATOM 10 O3' G A 635 56.662 33.754 -10.362 1.00 63.60 O
ATOM 11 C2' G A 635 54.709 34.437 -9.124 1.00 70.46 C
ATOM 12 O2' G A 635 55.306 33.807 -8.009 1.00 64.59 O
ATOM 13 C1' G A 635 54.156 35.813 -8.763 1.00 69.67 C
ATOM 14 N9 G A 635 53.045 36.078 -9.667 1.00 68.81 N
ATOM 15 C8 G A 635 53.048 36.895 -10.768 1.00 74.85 C
ATOM 16 N7 G A 635 51.941 36.836 -11.449 1.00 79.55 N
ATOM 17 C5 G A 635 51.152 35.948 -10.740 1.00 74.55 C
ATOM 18 C6 G A 635 49.850 35.477 -11.001 1.00 76.55 C
ATOM 19 O6 G A 635 49.105 35.755 -11.952 1.00 76.52 O
ATOM 20 N1 G A 635 49.426 34.586 -10.025 1.00 77.70 N
ATOM 21 C2 G A 635 50.166 34.194 -8.937 1.00 77.23 C
ATOM 22 N2 G A 635 49.579 33.317 -8.100 1.00 76.63 N
ATOM 23 N3 G A 635 51.387 34.628 -8.685 1.00 77.19 N
ATOM 24 C4 G A 635 51.813 35.493 -9.623 1.00 72.63 C
ATOM 25 P G A 636 56.259 32.553 -11.341 1.00 70.89 P
ATOM 26 OP1 G A 636 57.348 31.540 -11.345 1.00 73.77 O
ATOM 27 OP2 G A 636 55.865 33.205 -12.616 1.00 72.47 O
ATOM 28 O5' G A 636 54.937 31.927 -10.689 1.00 70.23 O
TER
ATOM 1 O3' C B 708 39.791 31.252 -14.104 1.00 70.57 O
ATOM 2 P U B 709 39.511 32.520 -13.159 1.00 80.34 P
ATOM 3 OP1 U B 709 38.286 32.234 -12.356 1.00 78.79 O
ATOM 4 OP2 U B 709 39.554 33.715 -14.045 1.00 66.25 O
ATOM 5 O5' U B 709 40.775 32.591 -12.181 1.00 81.07 O
ATOM 6 C5' U B 709 40.930 31.664 -11.099 1.00 73.76 C
ATOM 7 C4' U B 709 42.183 31.964 -10.298 1.00 73.69 C
ATOM 8 O4' U B 709 43.354 31.836 -11.141 1.00 70.06 O
ATOM 9 C3' U B 709 42.311 33.346 -9.670 1.00 75.88 C
ATOM 10 O3' U B 709 41.661 33.376 -8.409 1.00 75.03 O
ATOM 11 C2' U B 709 43.815 33.500 -9.493 1.00 73.67 C
ATOM 12 O2' U B 709 44.268 32.856 -8.321 1.00 74.75 O
ATOM 13 C1' U B 709 44.356 32.731 -10.698 1.00 70.09 C
ATOM 14 N1 U B 709 44.749 33.581 -11.826 1.00 70.17 N
ATOM 15 C2 U B 709 45.963 34.228 -11.758 1.00 71.97 C
ATOM 16 O2 U B 709 46.695 34.167 -10.792 1.00 72.58 O
ATOM 17 N3 U B 709 46.287 34.957 -12.869 1.00 70.41 N
ATOM 18 C4 U B 709 45.534 35.104 -14.010 1.00 68.81 C
ATOM 19 O4 U B 709 46.024 35.664 -14.988 1.00 66.21 O
ATOM 20 C5 U B 709 44.278 34.431 -13.982 1.00 72.00 C
ATOM 21 C6 U B 709 43.941 33.709 -12.921 1.00 70.89 C
ATOM 22 P G B 710 41.651 34.732 -7.549 1.00 78.59 P
ATOM 23 OP1 G B 710 40.459 34.652 -6.648 1.00 70.35 O
ATOM 24 OP2 G B 710 41.802 35.883 -8.483 1.00 73.52 O
ATOM 25 O5' G B 710 43.003 34.662 -6.705 1.00 74.51 O
TER
Atoms:
OP1: (54.832,39.173,-12.627)
OP2: (57.197,39.595,-11.677)
C3': (55.740,34.801,-10.177)
C1': (54.156,35.813,-8.763)
C5': (57.047,37.002,-10.590)
O6: (49.105,35.755,-11.952)
O4': (55.183,36.756,-9.035)
C8: (53.048,36.895,-10.768)
C2: (50.166,34.194,-8.937)
C6: (49.850,35.477,-11.001)
C5: (51.152,35.948,-10.740)
C4: (51.813,35.493,-9.623)
P: (56.235,38.719,-12.407)
C4': (56.336,36.080,-9.618)
C2': (54.709,34.437,-9.124)
O2': (55.306,33.807,-8.009)
N1: (49.426,34.586,-10.025)
N2: (49.579,33.317,-8.100)
N3: (51.387,34.628,-8.685)
N7: (51.941,36.836,-11.449)
N9: (53.045,36.078,-9.667)
O5': (56.221,37.282,-11.715)
O3': (56.662,33.754,-10.362)
OP2: (57.197,39.595,-11.677)
C3': (55.740,34.801,-10.177)
C1': (54.156,35.813,-8.763)
C5': (57.047,37.002,-10.590)
O6: (49.105,35.755,-11.952)
O4': (55.183,36.756,-9.035)
C8: (53.048,36.895,-10.768)
C2: (50.166,34.194,-8.937)
C6: (49.850,35.477,-11.001)
C5: (51.152,35.948,-10.740)
C4: (51.813,35.493,-9.623)
P: (56.235,38.719,-12.407)
C4': (56.336,36.080,-9.618)
C2': (54.709,34.437,-9.124)
O2': (55.306,33.807,-8.009)
N1: (49.426,34.586,-10.025)
N2: (49.579,33.317,-8.100)
N3: (51.387,34.628,-8.685)
N7: (51.941,36.836,-11.449)
N9: (53.045,36.078,-9.667)
O5': (56.221,37.282,-11.715)
O3': (56.662,33.754,-10.362)
C4: (45.534,35.104,-14.010)
N3: (46.287,34.957,-12.869)
OP1: (38.286,32.234,-12.356)
OP2: (39.554,33.715,-14.045)
C2: (45.963,34.228,-11.758)
C1': (44.356,32.731,-10.698)
C3': (42.311,33.346,-9.670)
O5': (40.775,32.591,-12.181)
O4': (43.354,31.836,-11.141)
C5': (40.930,31.664,-11.099)
P: (39.511,32.520,-13.159)
C4': (42.183,31.964,-10.298)
C2': (43.815,33.500,-9.493)
O2': (44.268,32.856,-8.321)
N1: (44.749,33.581,-11.826)
O4: (46.024,35.664,-14.988)
O2: (46.695,34.167,-10.792)
C6: (43.941,33.709,-12.921)
C5: (44.278,34.431,-13.982)
O3': (41.661,33.376,-8.409)
N3: (46.287,34.957,-12.869)
OP1: (38.286,32.234,-12.356)
OP2: (39.554,33.715,-14.045)
C2: (45.963,34.228,-11.758)
C1': (44.356,32.731,-10.698)
C3': (42.311,33.346,-9.670)
O5': (40.775,32.591,-12.181)
O4': (43.354,31.836,-11.141)
C5': (40.930,31.664,-11.099)
P: (39.511,32.520,-13.159)
C4': (42.183,31.964,-10.298)
C2': (43.815,33.500,-9.493)
O2': (44.268,32.856,-8.321)
N1: (44.749,33.581,-11.826)
O4: (46.024,35.664,-14.988)
O2: (46.695,34.167,-10.792)
C6: (43.941,33.709,-12.921)
C5: (44.278,34.431,-13.982)
O3': (41.661,33.376,-8.409)
Image (generated by PyMOL):