Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:07:0514
Extra
PDB:
ATOM 1 O3' A A 6 20.222 134.342 84.857 1.00 57.44 O
ATOM 2 P G A 7 20.578 135.274 83.587 1.00 60.61 P
ATOM 3 OP1 G A 7 20.454 134.394 82.391 1.00 60.64 O
ATOM 4 OP2 G A 7 21.865 135.969 83.849 1.00 60.69 O
ATOM 5 O5' G A 7 19.430 136.390 83.550 1.00 56.71 O
ATOM 6 C5' G A 7 18.073 136.046 83.206 1.00 53.65 C
ATOM 7 C4' G A 7 17.136 137.213 83.452 1.00 52.24 C
ATOM 8 O4' G A 7 17.369 137.758 84.776 1.00 53.19 O
ATOM 9 C3' G A 7 17.276 138.442 82.570 1.00 51.76 C
ATOM 10 O3' G A 7 16.639 138.246 81.310 1.00 50.86 O
ATOM 11 C2' G A 7 16.530 139.493 83.387 1.00 52.32 C
ATOM 12 O2' G A 7 15.126 139.405 83.253 1.00 52.68 O
ATOM 13 C1' G A 7 16.908 139.100 84.818 1.00 51.23 C
ATOM 14 N9 G A 7 17.948 139.952 85.395 1.00 49.73 N
ATOM 15 C8 G A 7 19.260 139.625 85.648 1.00 49.51 C
ATOM 16 N7 G A 7 19.948 140.618 86.144 1.00 49.16 N
ATOM 17 C5 G A 7 19.036 141.662 86.227 1.00 48.36 C
ATOM 18 C6 G A 7 19.202 142.997 86.683 1.00 48.68 C
ATOM 19 O6 G A 7 20.223 143.550 87.108 1.00 50.58 O
ATOM 20 N1 G A 7 18.016 143.713 86.604 1.00 47.87 N
ATOM 21 C2 G A 7 16.824 143.220 86.146 1.00 48.02 C
ATOM 22 N2 G A 7 15.791 144.076 86.153 1.00 46.78 N
ATOM 23 N3 G A 7 16.655 141.982 85.714 1.00 49.19 N
ATOM 24 C4 G A 7 17.796 141.264 85.780 1.00 48.72 C
ATOM 25 P C A 8 17.025 139.179 80.060 1.00 48.68 P
ATOM 26 OP1 C A 8 16.277 138.672 78.880 1.00 51.02 O
ATOM 27 OP2 C A 8 18.497 139.292 79.995 1.00 49.23 O
ATOM 28 O5' C A 8 16.452 140.608 80.454 1.00 45.86 O
TER
ATOM 1 O3' G B 513 20.960 153.187 89.094 1.00 43.35 O
ATOM 2 P U B 514 20.407 152.527 90.445 1.00 43.75 P
ATOM 3 OP1 U B 514 19.873 153.632 91.280 1.00 43.82 O
ATOM 4 OP2 U B 514 21.472 151.656 90.991 1.00 46.13 O
ATOM 5 O5' U B 514 19.223 151.571 89.962 1.00 44.15 O
ATOM 6 C5' U B 514 18.091 152.088 89.236 1.00 44.08 C
ATOM 7 C4' U B 514 17.338 150.965 88.551 1.00 45.62 C
ATOM 8 O4' U B 514 18.211 150.300 87.598 1.00 45.32 O
ATOM 9 C3' U B 514 16.805 149.841 89.434 1.00 46.14 C
ATOM 10 O3' U B 514 15.546 150.186 90.014 1.00 50.64 O
ATOM 11 C2' U B 514 16.661 148.698 88.439 1.00 45.37 C
ATOM 12 O2' U B 514 15.484 148.814 87.666 1.00 44.80 O
ATOM 13 C1' U B 514 17.892 148.914 87.548 1.00 44.62 C
ATOM 14 N1 U B 514 19.067 148.148 87.999 1.00 43.52 N
ATOM 15 C2 U B 514 19.093 146.784 87.750 1.00 42.72 C
ATOM 16 O2 U B 514 18.210 146.202 87.149 1.00 41.49 O
ATOM 17 N3 U B 514 20.200 146.130 88.230 1.00 41.80 N
ATOM 18 C4 U B 514 21.270 146.691 88.899 1.00 41.98 C
ATOM 19 O4 U B 514 22.215 145.979 89.232 1.00 43.59 O
ATOM 20 C5 U B 514 21.176 148.099 89.103 1.00 41.71 C
ATOM 21 C6 U B 514 20.110 148.763 88.660 1.00 43.18 C
ATOM 22 P U B 515 14.982 149.373 91.291 1.00 54.34 P
ATOM 23 OP1 U B 515 13.835 150.174 91.786 1.00 53.45 O
ATOM 24 OP2 U B 515 16.091 149.039 92.221 1.00 54.37 O
ATOM 25 O5' U B 515 14.416 148.010 90.684 1.00 51.81 O
TER
ATOM 2 P G A 7 20.578 135.274 83.587 1.00 60.61 P
ATOM 3 OP1 G A 7 20.454 134.394 82.391 1.00 60.64 O
ATOM 4 OP2 G A 7 21.865 135.969 83.849 1.00 60.69 O
ATOM 5 O5' G A 7 19.430 136.390 83.550 1.00 56.71 O
ATOM 6 C5' G A 7 18.073 136.046 83.206 1.00 53.65 C
ATOM 7 C4' G A 7 17.136 137.213 83.452 1.00 52.24 C
ATOM 8 O4' G A 7 17.369 137.758 84.776 1.00 53.19 O
ATOM 9 C3' G A 7 17.276 138.442 82.570 1.00 51.76 C
ATOM 10 O3' G A 7 16.639 138.246 81.310 1.00 50.86 O
ATOM 11 C2' G A 7 16.530 139.493 83.387 1.00 52.32 C
ATOM 12 O2' G A 7 15.126 139.405 83.253 1.00 52.68 O
ATOM 13 C1' G A 7 16.908 139.100 84.818 1.00 51.23 C
ATOM 14 N9 G A 7 17.948 139.952 85.395 1.00 49.73 N
ATOM 15 C8 G A 7 19.260 139.625 85.648 1.00 49.51 C
ATOM 16 N7 G A 7 19.948 140.618 86.144 1.00 49.16 N
ATOM 17 C5 G A 7 19.036 141.662 86.227 1.00 48.36 C
ATOM 18 C6 G A 7 19.202 142.997 86.683 1.00 48.68 C
ATOM 19 O6 G A 7 20.223 143.550 87.108 1.00 50.58 O
ATOM 20 N1 G A 7 18.016 143.713 86.604 1.00 47.87 N
ATOM 21 C2 G A 7 16.824 143.220 86.146 1.00 48.02 C
ATOM 22 N2 G A 7 15.791 144.076 86.153 1.00 46.78 N
ATOM 23 N3 G A 7 16.655 141.982 85.714 1.00 49.19 N
ATOM 24 C4 G A 7 17.796 141.264 85.780 1.00 48.72 C
ATOM 25 P C A 8 17.025 139.179 80.060 1.00 48.68 P
ATOM 26 OP1 C A 8 16.277 138.672 78.880 1.00 51.02 O
ATOM 27 OP2 C A 8 18.497 139.292 79.995 1.00 49.23 O
ATOM 28 O5' C A 8 16.452 140.608 80.454 1.00 45.86 O
TER
ATOM 1 O3' G B 513 20.960 153.187 89.094 1.00 43.35 O
ATOM 2 P U B 514 20.407 152.527 90.445 1.00 43.75 P
ATOM 3 OP1 U B 514 19.873 153.632 91.280 1.00 43.82 O
ATOM 4 OP2 U B 514 21.472 151.656 90.991 1.00 46.13 O
ATOM 5 O5' U B 514 19.223 151.571 89.962 1.00 44.15 O
ATOM 6 C5' U B 514 18.091 152.088 89.236 1.00 44.08 C
ATOM 7 C4' U B 514 17.338 150.965 88.551 1.00 45.62 C
ATOM 8 O4' U B 514 18.211 150.300 87.598 1.00 45.32 O
ATOM 9 C3' U B 514 16.805 149.841 89.434 1.00 46.14 C
ATOM 10 O3' U B 514 15.546 150.186 90.014 1.00 50.64 O
ATOM 11 C2' U B 514 16.661 148.698 88.439 1.00 45.37 C
ATOM 12 O2' U B 514 15.484 148.814 87.666 1.00 44.80 O
ATOM 13 C1' U B 514 17.892 148.914 87.548 1.00 44.62 C
ATOM 14 N1 U B 514 19.067 148.148 87.999 1.00 43.52 N
ATOM 15 C2 U B 514 19.093 146.784 87.750 1.00 42.72 C
ATOM 16 O2 U B 514 18.210 146.202 87.149 1.00 41.49 O
ATOM 17 N3 U B 514 20.200 146.130 88.230 1.00 41.80 N
ATOM 18 C4 U B 514 21.270 146.691 88.899 1.00 41.98 C
ATOM 19 O4 U B 514 22.215 145.979 89.232 1.00 43.59 O
ATOM 20 C5 U B 514 21.176 148.099 89.103 1.00 41.71 C
ATOM 21 C6 U B 514 20.110 148.763 88.660 1.00 43.18 C
ATOM 22 P U B 515 14.982 149.373 91.291 1.00 54.34 P
ATOM 23 OP1 U B 515 13.835 150.174 91.786 1.00 53.45 O
ATOM 24 OP2 U B 515 16.091 149.039 92.221 1.00 54.37 O
ATOM 25 O5' U B 515 14.416 148.010 90.684 1.00 51.81 O
TER
Atoms:
OP1: (20.454,134.394,82.391)
OP2: (21.865,135.969,83.849)
C3': (17.276,138.442,82.570)
C1': (16.908,139.100,84.818)
C5': (18.073,136.046,83.206)
O6: (20.223,143.550,87.108)
O4': (17.369,137.758,84.776)
C8: (19.260,139.625,85.648)
C2: (16.824,143.220,86.146)
C6: (19.202,142.997,86.683)
C5: (19.036,141.662,86.227)
C4: (17.796,141.264,85.780)
P: (20.578,135.274,83.587)
C4': (17.136,137.213,83.452)
C2': (16.530,139.493,83.387)
O2': (15.126,139.405,83.253)
N1: (18.016,143.713,86.604)
N2: (15.791,144.076,86.153)
N3: (16.655,141.982,85.714)
N7: (19.948,140.618,86.144)
N9: (17.948,139.952,85.395)
O5': (19.430,136.390,83.550)
O3': (16.639,138.246,81.310)
OP2: (21.865,135.969,83.849)
C3': (17.276,138.442,82.570)
C1': (16.908,139.100,84.818)
C5': (18.073,136.046,83.206)
O6: (20.223,143.550,87.108)
O4': (17.369,137.758,84.776)
C8: (19.260,139.625,85.648)
C2: (16.824,143.220,86.146)
C6: (19.202,142.997,86.683)
C5: (19.036,141.662,86.227)
C4: (17.796,141.264,85.780)
P: (20.578,135.274,83.587)
C4': (17.136,137.213,83.452)
C2': (16.530,139.493,83.387)
O2': (15.126,139.405,83.253)
N1: (18.016,143.713,86.604)
N2: (15.791,144.076,86.153)
N3: (16.655,141.982,85.714)
N7: (19.948,140.618,86.144)
N9: (17.948,139.952,85.395)
O5': (19.430,136.390,83.550)
O3': (16.639,138.246,81.310)
C4: (21.270,146.691,88.899)
N3: (20.200,146.130,88.230)
OP1: (19.873,153.632,91.280)
OP2: (21.472,151.656,90.991)
C2: (19.093,146.784,87.750)
C1': (17.892,148.914,87.548)
C3': (16.805,149.841,89.434)
O5': (19.223,151.571,89.962)
O4': (18.211,150.300,87.598)
C5': (18.091,152.088,89.236)
P: (20.407,152.527,90.445)
C4': (17.338,150.965,88.551)
C2': (16.661,148.698,88.439)
O2': (15.484,148.814,87.666)
N1: (19.067,148.148,87.999)
O4: (22.215,145.979,89.232)
O2: (18.210,146.202,87.149)
C6: (20.110,148.763,88.660)
C5: (21.176,148.099,89.103)
O3': (15.546,150.186,90.014)
N3: (20.200,146.130,88.230)
OP1: (19.873,153.632,91.280)
OP2: (21.472,151.656,90.991)
C2: (19.093,146.784,87.750)
C1': (17.892,148.914,87.548)
C3': (16.805,149.841,89.434)
O5': (19.223,151.571,89.962)
O4': (18.211,150.300,87.598)
C5': (18.091,152.088,89.236)
P: (20.407,152.527,90.445)
C4': (17.338,150.965,88.551)
C2': (16.661,148.698,88.439)
O2': (15.484,148.814,87.666)
N1: (19.067,148.148,87.999)
O4: (22.215,145.979,89.232)
O2: (18.210,146.202,87.149)
C6: (20.110,148.763,88.660)
C5: (21.176,148.099,89.103)
O3': (15.546,150.186,90.014)
Image (generated by PyMOL):