Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHY:A640:A721
Extra
PDB:
ATOM 1 O3' G A 639 43.084 51.433 -14.029 1.00116.75 O
ATOM 2 P G A 640 43.870 50.158 -14.593 1.00165.29 P
ATOM 3 OP1 G A 640 44.115 50.397 -16.036 1.00179.19 O
ATOM 4 OP2 G A 640 43.101 48.958 -14.191 1.00171.67 O
ATOM 5 O5' G A 640 45.241 50.223 -13.788 1.00122.60 O
ATOM 6 C5' G A 640 46.008 51.419 -13.782 1.00115.17 C
ATOM 7 C4' G A 640 47.136 51.378 -12.778 1.00109.75 C
ATOM 8 O4' G A 640 46.632 51.096 -11.453 1.00104.96 O
ATOM 9 C3' G A 640 48.206 50.323 -12.991 1.00103.44 C
ATOM 10 O3' G A 640 49.113 50.672 -14.029 1.00107.64 O
ATOM 11 C2' G A 640 48.858 50.243 -11.610 1.00101.05 C
ATOM 12 O2' G A 640 49.818 51.281 -11.450 1.00 92.22 O
ATOM 13 C1' G A 640 47.667 50.536 -10.677 1.00102.22 C
ATOM 14 N9 G A 640 47.157 49.328 -9.988 1.00118.88 N
ATOM 15 C8 G A 640 45.914 48.740 -10.118 1.00117.76 C
ATOM 16 N7 G A 640 45.746 47.694 -9.343 1.00113.95 N
ATOM 17 C5 G A 640 46.942 47.581 -8.641 1.00115.16 C
ATOM 18 C6 G A 640 47.361 46.637 -7.660 1.00104.57 C
ATOM 19 O6 G A 640 46.746 45.683 -7.192 1.00103.04 O
ATOM 20 N1 G A 640 48.649 46.883 -7.213 1.00 99.84 N
ATOM 21 C2 G A 640 49.441 47.916 -7.654 1.00108.12 C
ATOM 22 N2 G A 640 50.658 47.997 -7.103 1.00110.88 N
ATOM 23 N3 G A 640 49.078 48.809 -8.564 1.00110.73 N
ATOM 24 C4 G A 640 47.819 48.588 -9.018 1.00118.85 C
ATOM 25 P A A 641 49.676 49.555 -15.044 1.00124.57 P
ATOM 26 OP1 A A 641 49.971 50.232 -16.335 1.00114.71 O
ATOM 27 OP2 A A 641 48.712 48.424 -15.033 1.00115.30 O
ATOM 28 O5' A A 641 51.034 49.122 -14.348 1.00106.53 O
TER
ATOM 1 O3' G B 720 48.457 39.429 0.461 1.00 93.82 O
ATOM 2 P U B 721 47.697 40.707 1.046 1.00101.28 P
ATOM 3 OP1 U B 721 47.971 40.744 2.496 1.00102.00 O
ATOM 4 OP2 U B 721 46.285 40.627 0.586 1.00 87.16 O
ATOM 5 O5' U B 721 48.441 41.921 0.320 1.00115.12 O
ATOM 6 C5' U B 721 49.846 42.108 0.464 1.00111.76 C
ATOM 7 C4' U B 721 50.358 43.214 -0.427 1.00105.98 C
ATOM 8 O4' U B 721 50.275 42.804 -1.814 1.00105.14 O
ATOM 9 C3' U B 721 49.586 44.522 -0.371 1.00108.53 C
ATOM 10 O3' U B 721 49.982 45.342 0.712 1.00111.58 O
ATOM 11 C2' U B 721 49.863 45.135 -1.735 1.00108.79 C
ATOM 12 O2' U B 721 51.149 45.733 -1.766 1.00110.18 O
ATOM 13 C1' U B 721 49.891 43.894 -2.620 1.00107.65 C
ATOM 14 N1 U B 721 48.561 43.596 -3.207 1.00109.77 N
ATOM 15 C2 U B 721 48.261 44.064 -4.486 1.00107.08 C
ATOM 16 O2 U B 721 49.020 44.728 -5.176 1.00111.50 O
ATOM 17 N3 U B 721 47.014 43.739 -4.946 1.00 99.98 N
ATOM 18 C4 U B 721 46.051 43.007 -4.286 1.00108.12 C
ATOM 19 O4 U B 721 44.969 42.797 -4.845 1.00115.55 O
ATOM 20 C5 U B 721 46.431 42.556 -2.979 1.00107.46 C
ATOM 21 C6 U B 721 47.642 42.855 -2.497 1.00106.03 C
ATOM 22 P C B 722 48.932 46.329 1.417 1.00107.02 P
ATOM 23 OP1 C B 722 49.347 46.465 2.832 1.00 94.67 O
ATOM 24 OP2 C B 722 47.572 45.813 1.122 1.00104.82 O
ATOM 25 O5' C B 722 49.173 47.699 0.644 1.00110.99 O
TER
ATOM 2 P G A 640 43.870 50.158 -14.593 1.00165.29 P
ATOM 3 OP1 G A 640 44.115 50.397 -16.036 1.00179.19 O
ATOM 4 OP2 G A 640 43.101 48.958 -14.191 1.00171.67 O
ATOM 5 O5' G A 640 45.241 50.223 -13.788 1.00122.60 O
ATOM 6 C5' G A 640 46.008 51.419 -13.782 1.00115.17 C
ATOM 7 C4' G A 640 47.136 51.378 -12.778 1.00109.75 C
ATOM 8 O4' G A 640 46.632 51.096 -11.453 1.00104.96 O
ATOM 9 C3' G A 640 48.206 50.323 -12.991 1.00103.44 C
ATOM 10 O3' G A 640 49.113 50.672 -14.029 1.00107.64 O
ATOM 11 C2' G A 640 48.858 50.243 -11.610 1.00101.05 C
ATOM 12 O2' G A 640 49.818 51.281 -11.450 1.00 92.22 O
ATOM 13 C1' G A 640 47.667 50.536 -10.677 1.00102.22 C
ATOM 14 N9 G A 640 47.157 49.328 -9.988 1.00118.88 N
ATOM 15 C8 G A 640 45.914 48.740 -10.118 1.00117.76 C
ATOM 16 N7 G A 640 45.746 47.694 -9.343 1.00113.95 N
ATOM 17 C5 G A 640 46.942 47.581 -8.641 1.00115.16 C
ATOM 18 C6 G A 640 47.361 46.637 -7.660 1.00104.57 C
ATOM 19 O6 G A 640 46.746 45.683 -7.192 1.00103.04 O
ATOM 20 N1 G A 640 48.649 46.883 -7.213 1.00 99.84 N
ATOM 21 C2 G A 640 49.441 47.916 -7.654 1.00108.12 C
ATOM 22 N2 G A 640 50.658 47.997 -7.103 1.00110.88 N
ATOM 23 N3 G A 640 49.078 48.809 -8.564 1.00110.73 N
ATOM 24 C4 G A 640 47.819 48.588 -9.018 1.00118.85 C
ATOM 25 P A A 641 49.676 49.555 -15.044 1.00124.57 P
ATOM 26 OP1 A A 641 49.971 50.232 -16.335 1.00114.71 O
ATOM 27 OP2 A A 641 48.712 48.424 -15.033 1.00115.30 O
ATOM 28 O5' A A 641 51.034 49.122 -14.348 1.00106.53 O
TER
ATOM 1 O3' G B 720 48.457 39.429 0.461 1.00 93.82 O
ATOM 2 P U B 721 47.697 40.707 1.046 1.00101.28 P
ATOM 3 OP1 U B 721 47.971 40.744 2.496 1.00102.00 O
ATOM 4 OP2 U B 721 46.285 40.627 0.586 1.00 87.16 O
ATOM 5 O5' U B 721 48.441 41.921 0.320 1.00115.12 O
ATOM 6 C5' U B 721 49.846 42.108 0.464 1.00111.76 C
ATOM 7 C4' U B 721 50.358 43.214 -0.427 1.00105.98 C
ATOM 8 O4' U B 721 50.275 42.804 -1.814 1.00105.14 O
ATOM 9 C3' U B 721 49.586 44.522 -0.371 1.00108.53 C
ATOM 10 O3' U B 721 49.982 45.342 0.712 1.00111.58 O
ATOM 11 C2' U B 721 49.863 45.135 -1.735 1.00108.79 C
ATOM 12 O2' U B 721 51.149 45.733 -1.766 1.00110.18 O
ATOM 13 C1' U B 721 49.891 43.894 -2.620 1.00107.65 C
ATOM 14 N1 U B 721 48.561 43.596 -3.207 1.00109.77 N
ATOM 15 C2 U B 721 48.261 44.064 -4.486 1.00107.08 C
ATOM 16 O2 U B 721 49.020 44.728 -5.176 1.00111.50 O
ATOM 17 N3 U B 721 47.014 43.739 -4.946 1.00 99.98 N
ATOM 18 C4 U B 721 46.051 43.007 -4.286 1.00108.12 C
ATOM 19 O4 U B 721 44.969 42.797 -4.845 1.00115.55 O
ATOM 20 C5 U B 721 46.431 42.556 -2.979 1.00107.46 C
ATOM 21 C6 U B 721 47.642 42.855 -2.497 1.00106.03 C
ATOM 22 P C B 722 48.932 46.329 1.417 1.00107.02 P
ATOM 23 OP1 C B 722 49.347 46.465 2.832 1.00 94.67 O
ATOM 24 OP2 C B 722 47.572 45.813 1.122 1.00104.82 O
ATOM 25 O5' C B 722 49.173 47.699 0.644 1.00110.99 O
TER
Atoms:
OP1: (44.115,50.397,-16.036)
OP2: (43.101,48.958,-14.191)
C3': (48.206,50.323,-12.991)
C1': (47.667,50.536,-10.677)
C5': (46.008,51.419,-13.782)
O6: (46.746,45.683,-7.192)
O4': (46.632,51.096,-11.453)
C8: (45.914,48.740,-10.118)
C2: (49.441,47.916,-7.654)
C6: (47.361,46.637,-7.660)
C5: (46.942,47.581,-8.641)
C4: (47.819,48.588,-9.018)
P: (43.870,50.158,-14.593)
C4': (47.136,51.378,-12.778)
C2': (48.858,50.243,-11.610)
O2': (49.818,51.281,-11.450)
N1: (48.649,46.883,-7.213)
N2: (50.658,47.997,-7.103)
N3: (49.078,48.809,-8.564)
N7: (45.746,47.694,-9.343)
N9: (47.157,49.328,-9.988)
O5': (45.241,50.223,-13.788)
O3': (49.113,50.672,-14.029)
OP2: (43.101,48.958,-14.191)
C3': (48.206,50.323,-12.991)
C1': (47.667,50.536,-10.677)
C5': (46.008,51.419,-13.782)
O6: (46.746,45.683,-7.192)
O4': (46.632,51.096,-11.453)
C8: (45.914,48.740,-10.118)
C2: (49.441,47.916,-7.654)
C6: (47.361,46.637,-7.660)
C5: (46.942,47.581,-8.641)
C4: (47.819,48.588,-9.018)
P: (43.870,50.158,-14.593)
C4': (47.136,51.378,-12.778)
C2': (48.858,50.243,-11.610)
O2': (49.818,51.281,-11.450)
N1: (48.649,46.883,-7.213)
N2: (50.658,47.997,-7.103)
N3: (49.078,48.809,-8.564)
N7: (45.746,47.694,-9.343)
N9: (47.157,49.328,-9.988)
O5': (45.241,50.223,-13.788)
O3': (49.113,50.672,-14.029)
C4: (46.051,43.007,-4.286)
N3: (47.014,43.739,-4.946)
OP1: (47.971,40.744,2.496)
OP2: (46.285,40.627,0.586)
C2: (48.261,44.064,-4.486)
C1': (49.891,43.894,-2.620)
C3': (49.586,44.522,-0.371)
O5': (48.441,41.921,0.320)
O4': (50.275,42.804,-1.814)
C5': (49.846,42.108,0.464)
P: (47.697,40.707,1.046)
C4': (50.358,43.214,-0.427)
C2': (49.863,45.135,-1.735)
O2': (51.149,45.733,-1.766)
N1: (48.561,43.596,-3.207)
O4: (44.969,42.797,-4.845)
O2: (49.020,44.728,-5.176)
C6: (47.642,42.855,-2.497)
C5: (46.431,42.556,-2.979)
O3': (49.982,45.342,0.712)
N3: (47.014,43.739,-4.946)
OP1: (47.971,40.744,2.496)
OP2: (46.285,40.627,0.586)
C2: (48.261,44.064,-4.486)
C1': (49.891,43.894,-2.620)
C3': (49.586,44.522,-0.371)
O5': (48.441,41.921,0.320)
O4': (50.275,42.804,-1.814)
C5': (49.846,42.108,0.464)
P: (47.697,40.707,1.046)
C4': (50.358,43.214,-0.427)
C2': (49.863,45.135,-1.735)
O2': (51.149,45.733,-1.766)
N1: (48.561,43.596,-3.207)
O4: (44.969,42.797,-4.845)
O2: (49.020,44.728,-5.176)
C6: (47.642,42.855,-2.497)
C5: (46.431,42.556,-2.979)
O3': (49.982,45.342,0.712)
Image (generated by PyMOL):