Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A415:A424
Extra
PDB:
ATOM 1 O3' G A 414 -124.847 20.911 -67.929 1.00 57.95 O
ATOM 2 P G A 415 -125.167 21.374 -66.414 1.00 58.96 P
ATOM 3 OP1 G A 415 -125.827 20.227 -65.730 1.00 58.96 O
ATOM 4 OP2 G A 415 -125.887 22.669 -66.490 1.00 58.96 O
ATOM 5 O5' G A 415 -123.709 21.608 -65.809 1.00 58.96 O
ATOM 6 C5' G A 415 -122.673 20.651 -66.012 1.00 58.96 C
ATOM 7 C4' G A 415 -121.338 21.141 -65.497 1.00 58.96 C
ATOM 8 O4' G A 415 -120.720 22.033 -66.463 1.00 58.96 O
ATOM 9 C3' G A 415 -121.366 21.964 -64.221 1.00 58.96 C
ATOM 10 O3' G A 415 -121.527 21.177 -63.054 1.00 58.96 O
ATOM 11 C2' G A 415 -120.034 22.699 -64.295 1.00 58.96 C
ATOM 12 O2' G A 415 -118.953 21.828 -63.973 1.00 58.96 O
ATOM 13 C1' G A 415 -119.962 23.018 -65.786 1.00 58.96 C
ATOM 14 N9 G A 415 -120.524 24.343 -66.102 1.00 58.47 N
ATOM 15 C8 G A 415 -121.666 24.585 -66.814 1.00 58.47 C
ATOM 16 N7 G A 415 -121.922 25.851 -66.969 1.00 58.47 N
ATOM 17 C5 G A 415 -120.881 26.487 -66.322 1.00 58.47 C
ATOM 18 C6 G A 415 -120.622 27.871 -66.163 1.00 58.47 C
ATOM 19 O6 G A 415 -121.286 28.830 -66.566 1.00 58.47 O
ATOM 20 N1 G A 415 -119.460 28.101 -65.449 1.00 58.47 N
ATOM 21 C2 G A 415 -118.660 27.106 -64.960 1.00 58.47 C
ATOM 22 N2 G A 415 -117.584 27.530 -64.296 1.00 58.47 N
ATOM 23 N3 G A 415 -118.885 25.808 -65.096 1.00 58.47 N
ATOM 24 C4 G A 415 -120.008 25.570 -65.787 1.00 58.47 C
ATOM 25 P C A 416 -121.427 21.854 -61.602 1.00 45.63 P
ATOM 26 OP1 C A 416 -121.554 20.755 -60.606 1.00 45.63 O
ATOM 27 OP2 C A 416 -122.404 22.970 -61.567 1.00 45.63 O
ATOM 28 O5' C A 416 -119.947 22.447 -61.596 1.00 45.63 O
TER
ATOM 1 O3' G B 423 -119.455 38.482 -63.670 1.00 44.40 O
ATOM 2 P U B 424 -118.635 38.514 -65.042 1.00 62.35 P
ATOM 3 OP1 U B 424 -117.690 39.664 -64.953 1.00 62.35 O
ATOM 4 OP2 U B 424 -119.632 38.481 -66.144 1.00 62.35 O
ATOM 5 O5' U B 424 -117.831 37.139 -65.006 1.00 62.35 O
ATOM 6 C5' U B 424 -117.029 36.803 -63.890 1.00 62.35 C
ATOM 7 C4' U B 424 -116.748 35.330 -63.840 1.00 62.35 C
ATOM 8 O4' U B 424 -117.976 34.598 -63.660 1.00 62.35 O
ATOM 9 C3' U B 424 -116.146 34.732 -65.089 1.00 62.35 C
ATOM 10 O3' U B 424 -114.752 34.975 -65.184 1.00 62.35 O
ATOM 11 C2' U B 424 -116.510 33.256 -64.962 1.00 62.35 C
ATOM 12 O2' U B 424 -115.581 32.567 -64.143 1.00 62.35 O
ATOM 13 C1' U B 424 -117.849 33.322 -64.229 1.00 62.35 C
ATOM 14 N1 U B 424 -118.973 33.097 -65.116 1.00 62.25 N
ATOM 15 C2 U B 424 -119.215 31.777 -65.380 1.00 62.25 C
ATOM 16 O2 U B 424 -118.529 30.875 -64.931 1.00 62.25 O
ATOM 17 N3 U B 424 -120.280 31.550 -66.201 1.00 62.25 N
ATOM 18 C4 U B 424 -121.103 32.496 -66.763 1.00 62.25 C
ATOM 19 O4 U B 424 -122.028 32.106 -67.486 1.00 62.25 O
ATOM 20 C5 U B 424 -120.778 33.858 -66.426 1.00 62.25 C
ATOM 21 C6 U B 424 -119.742 34.108 -65.619 1.00 62.25 C
ATOM 22 P U B 425 -114.033 35.057 -66.619 1.00 40.55 P
ATOM 23 OP1 U B 425 -112.633 35.494 -66.386 1.00 40.55 O
ATOM 24 OP2 U B 425 -114.892 35.883 -67.490 1.00 40.55 O
ATOM 25 O5' U B 425 -114.055 33.538 -67.096 1.00 40.55 O
TER
ATOM 2 P G A 415 -125.167 21.374 -66.414 1.00 58.96 P
ATOM 3 OP1 G A 415 -125.827 20.227 -65.730 1.00 58.96 O
ATOM 4 OP2 G A 415 -125.887 22.669 -66.490 1.00 58.96 O
ATOM 5 O5' G A 415 -123.709 21.608 -65.809 1.00 58.96 O
ATOM 6 C5' G A 415 -122.673 20.651 -66.012 1.00 58.96 C
ATOM 7 C4' G A 415 -121.338 21.141 -65.497 1.00 58.96 C
ATOM 8 O4' G A 415 -120.720 22.033 -66.463 1.00 58.96 O
ATOM 9 C3' G A 415 -121.366 21.964 -64.221 1.00 58.96 C
ATOM 10 O3' G A 415 -121.527 21.177 -63.054 1.00 58.96 O
ATOM 11 C2' G A 415 -120.034 22.699 -64.295 1.00 58.96 C
ATOM 12 O2' G A 415 -118.953 21.828 -63.973 1.00 58.96 O
ATOM 13 C1' G A 415 -119.962 23.018 -65.786 1.00 58.96 C
ATOM 14 N9 G A 415 -120.524 24.343 -66.102 1.00 58.47 N
ATOM 15 C8 G A 415 -121.666 24.585 -66.814 1.00 58.47 C
ATOM 16 N7 G A 415 -121.922 25.851 -66.969 1.00 58.47 N
ATOM 17 C5 G A 415 -120.881 26.487 -66.322 1.00 58.47 C
ATOM 18 C6 G A 415 -120.622 27.871 -66.163 1.00 58.47 C
ATOM 19 O6 G A 415 -121.286 28.830 -66.566 1.00 58.47 O
ATOM 20 N1 G A 415 -119.460 28.101 -65.449 1.00 58.47 N
ATOM 21 C2 G A 415 -118.660 27.106 -64.960 1.00 58.47 C
ATOM 22 N2 G A 415 -117.584 27.530 -64.296 1.00 58.47 N
ATOM 23 N3 G A 415 -118.885 25.808 -65.096 1.00 58.47 N
ATOM 24 C4 G A 415 -120.008 25.570 -65.787 1.00 58.47 C
ATOM 25 P C A 416 -121.427 21.854 -61.602 1.00 45.63 P
ATOM 26 OP1 C A 416 -121.554 20.755 -60.606 1.00 45.63 O
ATOM 27 OP2 C A 416 -122.404 22.970 -61.567 1.00 45.63 O
ATOM 28 O5' C A 416 -119.947 22.447 -61.596 1.00 45.63 O
TER
ATOM 1 O3' G B 423 -119.455 38.482 -63.670 1.00 44.40 O
ATOM 2 P U B 424 -118.635 38.514 -65.042 1.00 62.35 P
ATOM 3 OP1 U B 424 -117.690 39.664 -64.953 1.00 62.35 O
ATOM 4 OP2 U B 424 -119.632 38.481 -66.144 1.00 62.35 O
ATOM 5 O5' U B 424 -117.831 37.139 -65.006 1.00 62.35 O
ATOM 6 C5' U B 424 -117.029 36.803 -63.890 1.00 62.35 C
ATOM 7 C4' U B 424 -116.748 35.330 -63.840 1.00 62.35 C
ATOM 8 O4' U B 424 -117.976 34.598 -63.660 1.00 62.35 O
ATOM 9 C3' U B 424 -116.146 34.732 -65.089 1.00 62.35 C
ATOM 10 O3' U B 424 -114.752 34.975 -65.184 1.00 62.35 O
ATOM 11 C2' U B 424 -116.510 33.256 -64.962 1.00 62.35 C
ATOM 12 O2' U B 424 -115.581 32.567 -64.143 1.00 62.35 O
ATOM 13 C1' U B 424 -117.849 33.322 -64.229 1.00 62.35 C
ATOM 14 N1 U B 424 -118.973 33.097 -65.116 1.00 62.25 N
ATOM 15 C2 U B 424 -119.215 31.777 -65.380 1.00 62.25 C
ATOM 16 O2 U B 424 -118.529 30.875 -64.931 1.00 62.25 O
ATOM 17 N3 U B 424 -120.280 31.550 -66.201 1.00 62.25 N
ATOM 18 C4 U B 424 -121.103 32.496 -66.763 1.00 62.25 C
ATOM 19 O4 U B 424 -122.028 32.106 -67.486 1.00 62.25 O
ATOM 20 C5 U B 424 -120.778 33.858 -66.426 1.00 62.25 C
ATOM 21 C6 U B 424 -119.742 34.108 -65.619 1.00 62.25 C
ATOM 22 P U B 425 -114.033 35.057 -66.619 1.00 40.55 P
ATOM 23 OP1 U B 425 -112.633 35.494 -66.386 1.00 40.55 O
ATOM 24 OP2 U B 425 -114.892 35.883 -67.490 1.00 40.55 O
ATOM 25 O5' U B 425 -114.055 33.538 -67.096 1.00 40.55 O
TER
Atoms:
OP1: (-125.827,20.227,-65.730)
OP2: (-125.887,22.669,-66.490)
C3': (-121.366,21.964,-64.221)
C1': (-119.962,23.018,-65.786)
C5': (-122.673,20.651,-66.012)
O6: (-121.286,28.830,-66.566)
O4': (-120.720,22.033,-66.463)
C8: (-121.666,24.585,-66.814)
C2: (-118.660,27.106,-64.960)
C6: (-120.622,27.871,-66.163)
C5: (-120.881,26.487,-66.322)
C4: (-120.008,25.570,-65.787)
P: (-125.167,21.374,-66.414)
C4': (-121.338,21.141,-65.497)
C2': (-120.034,22.699,-64.295)
O2': (-118.953,21.828,-63.973)
N1: (-119.460,28.101,-65.449)
N2: (-117.584,27.530,-64.296)
N3: (-118.885,25.808,-65.096)
N7: (-121.922,25.851,-66.969)
N9: (-120.524,24.343,-66.102)
O5': (-123.709,21.608,-65.809)
O3': (-121.527,21.177,-63.054)
OP2: (-125.887,22.669,-66.490)
C3': (-121.366,21.964,-64.221)
C1': (-119.962,23.018,-65.786)
C5': (-122.673,20.651,-66.012)
O6: (-121.286,28.830,-66.566)
O4': (-120.720,22.033,-66.463)
C8: (-121.666,24.585,-66.814)
C2: (-118.660,27.106,-64.960)
C6: (-120.622,27.871,-66.163)
C5: (-120.881,26.487,-66.322)
C4: (-120.008,25.570,-65.787)
P: (-125.167,21.374,-66.414)
C4': (-121.338,21.141,-65.497)
C2': (-120.034,22.699,-64.295)
O2': (-118.953,21.828,-63.973)
N1: (-119.460,28.101,-65.449)
N2: (-117.584,27.530,-64.296)
N3: (-118.885,25.808,-65.096)
N7: (-121.922,25.851,-66.969)
N9: (-120.524,24.343,-66.102)
O5': (-123.709,21.608,-65.809)
O3': (-121.527,21.177,-63.054)
C4: (-121.103,32.496,-66.763)
N3: (-120.280,31.550,-66.201)
OP1: (-117.690,39.664,-64.953)
OP2: (-119.632,38.481,-66.144)
C2: (-119.215,31.777,-65.380)
C1': (-117.849,33.322,-64.229)
C3': (-116.146,34.732,-65.089)
O5': (-117.831,37.139,-65.006)
O4': (-117.976,34.598,-63.660)
C5': (-117.029,36.803,-63.890)
P: (-118.635,38.514,-65.042)
C4': (-116.748,35.330,-63.840)
C2': (-116.510,33.256,-64.962)
O2': (-115.581,32.567,-64.143)
N1: (-118.973,33.097,-65.116)
O4: (-122.028,32.106,-67.486)
O2: (-118.529,30.875,-64.931)
C6: (-119.742,34.108,-65.619)
C5: (-120.778,33.858,-66.426)
O3': (-114.752,34.975,-65.184)
N3: (-120.280,31.550,-66.201)
OP1: (-117.690,39.664,-64.953)
OP2: (-119.632,38.481,-66.144)
C2: (-119.215,31.777,-65.380)
C1': (-117.849,33.322,-64.229)
C3': (-116.146,34.732,-65.089)
O5': (-117.831,37.139,-65.006)
O4': (-117.976,34.598,-63.660)
C5': (-117.029,36.803,-63.890)
P: (-118.635,38.514,-65.042)
C4': (-116.748,35.330,-63.840)
C2': (-116.510,33.256,-64.962)
O2': (-115.581,32.567,-64.143)
N1: (-118.973,33.097,-65.116)
O4: (-122.028,32.106,-67.486)
O2: (-118.529,30.875,-64.931)
C6: (-119.742,34.108,-65.619)
C5: (-120.778,33.858,-66.426)
O3': (-114.752,34.975,-65.184)
Image (generated by PyMOL):