Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5H:52356:52237
Extra
PDB:
ATOM 1 O3' G A2355 172.340 -38.585 207.248 1.00 51.84 O
ATOM 2 P G A2356 171.919 -37.167 207.886 1.00 54.31 P
ATOM 3 OP1 G A2356 171.823 -37.388 209.354 1.00 53.96 O
ATOM 4 OP2 G A2356 170.709 -36.688 207.162 1.00 54.27 O
ATOM 5 O5' G A2356 173.176 -36.215 207.545 1.00 54.30 O
ATOM 6 C5' G A2356 174.407 -36.342 208.252 1.00 54.27 C
ATOM 7 C4' G A2356 175.526 -35.502 207.656 1.00 54.35 C
ATOM 8 O4' G A2356 175.532 -35.601 206.209 1.00 54.78 O
ATOM 9 C3' G A2356 175.470 -34.014 207.911 1.00 53.92 C
ATOM 10 O3' G A2356 175.882 -33.650 209.219 1.00 53.54 O
ATOM 11 C2' G A2356 176.346 -33.447 206.781 1.00 54.21 C
ATOM 12 O2' G A2356 177.731 -33.556 207.066 1.00 54.32 O
ATOM 13 C1' G A2356 176.019 -34.400 205.640 1.00 54.71 C
ATOM 14 N9 G A2356 174.987 -33.846 204.757 1.00 54.71 N
ATOM 15 C8 G A2356 173.748 -34.362 204.452 1.00 54.79 C
ATOM 16 N7 G A2356 173.012 -33.631 203.634 1.00 54.77 N
ATOM 17 C5 G A2356 173.845 -32.550 203.413 1.00 54.68 C
ATOM 18 C6 G A2356 173.622 -31.411 202.618 1.00 54.64 C
ATOM 19 O6 G A2356 172.662 -31.125 201.941 1.00 54.68 O
ATOM 20 N1 G A2356 174.695 -30.556 202.649 1.00 54.56 N
ATOM 21 C2 G A2356 175.855 -30.766 203.367 1.00 54.52 C
ATOM 22 N2 G A2356 176.778 -29.781 203.240 1.00 54.46 N
ATOM 23 N3 G A2356 176.082 -31.834 204.121 1.00 54.57 N
ATOM 24 C4 G A2356 175.051 -32.669 204.093 1.00 54.64 C
ATOM 25 P U A2357 174.907 -32.770 210.163 1.00 47.13 P
ATOM 26 OP1 U A2357 175.488 -32.786 211.531 1.00 46.85 O
ATOM 27 OP2 U A2357 173.526 -33.280 209.975 1.00 47.14 O
ATOM 28 O5' U A2357 175.040 -31.314 209.550 1.00 46.98 O
TER
ATOM 1 O3' G B2236 172.064 -24.023 195.529 1.00 52.59 O
ATOM 2 P U B2237 172.870 -25.129 194.693 1.00 54.04 P
ATOM 3 OP1 U B2237 173.445 -24.444 193.503 1.00 54.38 O
ATOM 4 OP2 U B2237 171.971 -26.276 194.478 1.00 54.24 O
ATOM 5 O5' U B2237 174.023 -25.558 195.693 1.00 53.91 O
ATOM 6 C5' U B2237 175.059 -24.680 196.052 1.00 53.73 C
ATOM 7 C4' U B2237 175.651 -25.110 197.348 1.00 53.46 C
ATOM 8 O4' U B2237 174.592 -25.315 198.294 1.00 53.07 O
ATOM 9 C3' U B2237 176.365 -26.440 197.340 1.00 53.80 C
ATOM 10 O3' U B2237 177.675 -26.349 196.851 1.00 54.11 O
ATOM 11 C2' U B2237 176.299 -26.858 198.790 1.00 53.41 C
ATOM 12 O2' U B2237 177.277 -26.172 199.553 1.00 53.15 O
ATOM 13 C1' U B2237 174.936 -26.326 199.193 1.00 53.01 C
ATOM 14 N1 U B2237 173.896 -27.342 199.147 1.00 53.12 N
ATOM 15 C2 U B2237 173.822 -28.306 200.133 1.00 52.99 C
ATOM 16 O2 U B2237 174.570 -28.469 201.060 1.00 52.82 O
ATOM 17 N3 U B2237 172.785 -29.154 199.999 1.00 53.10 N
ATOM 18 C4 U B2237 171.834 -29.139 199.032 1.00 53.31 C
ATOM 19 O4 U B2237 171.003 -30.014 199.113 1.00 53.38 O
ATOM 20 C5 U B2237 171.953 -28.128 198.044 1.00 53.42 C
ATOM 21 C6 U B2237 172.962 -27.270 198.145 1.00 53.32 C
ATOM 22 P U B2238 178.221 -27.458 195.847 1.00 68.13 P
ATOM 23 OP1 U B2238 179.431 -26.885 195.199 1.00 68.39 O
ATOM 24 OP2 U B2238 177.081 -27.889 194.982 1.00 68.36 O
ATOM 25 O5' U B2238 178.643 -28.633 196.842 1.00 68.09 O
TER
ATOM 2 P G A2356 171.919 -37.167 207.886 1.00 54.31 P
ATOM 3 OP1 G A2356 171.823 -37.388 209.354 1.00 53.96 O
ATOM 4 OP2 G A2356 170.709 -36.688 207.162 1.00 54.27 O
ATOM 5 O5' G A2356 173.176 -36.215 207.545 1.00 54.30 O
ATOM 6 C5' G A2356 174.407 -36.342 208.252 1.00 54.27 C
ATOM 7 C4' G A2356 175.526 -35.502 207.656 1.00 54.35 C
ATOM 8 O4' G A2356 175.532 -35.601 206.209 1.00 54.78 O
ATOM 9 C3' G A2356 175.470 -34.014 207.911 1.00 53.92 C
ATOM 10 O3' G A2356 175.882 -33.650 209.219 1.00 53.54 O
ATOM 11 C2' G A2356 176.346 -33.447 206.781 1.00 54.21 C
ATOM 12 O2' G A2356 177.731 -33.556 207.066 1.00 54.32 O
ATOM 13 C1' G A2356 176.019 -34.400 205.640 1.00 54.71 C
ATOM 14 N9 G A2356 174.987 -33.846 204.757 1.00 54.71 N
ATOM 15 C8 G A2356 173.748 -34.362 204.452 1.00 54.79 C
ATOM 16 N7 G A2356 173.012 -33.631 203.634 1.00 54.77 N
ATOM 17 C5 G A2356 173.845 -32.550 203.413 1.00 54.68 C
ATOM 18 C6 G A2356 173.622 -31.411 202.618 1.00 54.64 C
ATOM 19 O6 G A2356 172.662 -31.125 201.941 1.00 54.68 O
ATOM 20 N1 G A2356 174.695 -30.556 202.649 1.00 54.56 N
ATOM 21 C2 G A2356 175.855 -30.766 203.367 1.00 54.52 C
ATOM 22 N2 G A2356 176.778 -29.781 203.240 1.00 54.46 N
ATOM 23 N3 G A2356 176.082 -31.834 204.121 1.00 54.57 N
ATOM 24 C4 G A2356 175.051 -32.669 204.093 1.00 54.64 C
ATOM 25 P U A2357 174.907 -32.770 210.163 1.00 47.13 P
ATOM 26 OP1 U A2357 175.488 -32.786 211.531 1.00 46.85 O
ATOM 27 OP2 U A2357 173.526 -33.280 209.975 1.00 47.14 O
ATOM 28 O5' U A2357 175.040 -31.314 209.550 1.00 46.98 O
TER
ATOM 1 O3' G B2236 172.064 -24.023 195.529 1.00 52.59 O
ATOM 2 P U B2237 172.870 -25.129 194.693 1.00 54.04 P
ATOM 3 OP1 U B2237 173.445 -24.444 193.503 1.00 54.38 O
ATOM 4 OP2 U B2237 171.971 -26.276 194.478 1.00 54.24 O
ATOM 5 O5' U B2237 174.023 -25.558 195.693 1.00 53.91 O
ATOM 6 C5' U B2237 175.059 -24.680 196.052 1.00 53.73 C
ATOM 7 C4' U B2237 175.651 -25.110 197.348 1.00 53.46 C
ATOM 8 O4' U B2237 174.592 -25.315 198.294 1.00 53.07 O
ATOM 9 C3' U B2237 176.365 -26.440 197.340 1.00 53.80 C
ATOM 10 O3' U B2237 177.675 -26.349 196.851 1.00 54.11 O
ATOM 11 C2' U B2237 176.299 -26.858 198.790 1.00 53.41 C
ATOM 12 O2' U B2237 177.277 -26.172 199.553 1.00 53.15 O
ATOM 13 C1' U B2237 174.936 -26.326 199.193 1.00 53.01 C
ATOM 14 N1 U B2237 173.896 -27.342 199.147 1.00 53.12 N
ATOM 15 C2 U B2237 173.822 -28.306 200.133 1.00 52.99 C
ATOM 16 O2 U B2237 174.570 -28.469 201.060 1.00 52.82 O
ATOM 17 N3 U B2237 172.785 -29.154 199.999 1.00 53.10 N
ATOM 18 C4 U B2237 171.834 -29.139 199.032 1.00 53.31 C
ATOM 19 O4 U B2237 171.003 -30.014 199.113 1.00 53.38 O
ATOM 20 C5 U B2237 171.953 -28.128 198.044 1.00 53.42 C
ATOM 21 C6 U B2237 172.962 -27.270 198.145 1.00 53.32 C
ATOM 22 P U B2238 178.221 -27.458 195.847 1.00 68.13 P
ATOM 23 OP1 U B2238 179.431 -26.885 195.199 1.00 68.39 O
ATOM 24 OP2 U B2238 177.081 -27.889 194.982 1.00 68.36 O
ATOM 25 O5' U B2238 178.643 -28.633 196.842 1.00 68.09 O
TER
Atoms:
OP1: (171.823,-37.388,209.354)
OP2: (170.709,-36.688,207.162)
C3': (175.470,-34.014,207.911)
C1': (176.019,-34.400,205.640)
C5': (174.407,-36.342,208.252)
O6: (172.662,-31.125,201.941)
O4': (175.532,-35.601,206.209)
C8: (173.748,-34.362,204.452)
C2: (175.855,-30.766,203.367)
C6: (173.622,-31.411,202.618)
C5: (173.845,-32.550,203.413)
C4: (175.051,-32.669,204.093)
P: (171.919,-37.167,207.886)
C4': (175.526,-35.502,207.656)
C2': (176.346,-33.447,206.781)
O2': (177.731,-33.556,207.066)
N1: (174.695,-30.556,202.649)
N2: (176.778,-29.781,203.240)
N3: (176.082,-31.834,204.121)
N7: (173.012,-33.631,203.634)
N9: (174.987,-33.846,204.757)
O5': (173.176,-36.215,207.545)
O3': (175.882,-33.650,209.219)
OP2: (170.709,-36.688,207.162)
C3': (175.470,-34.014,207.911)
C1': (176.019,-34.400,205.640)
C5': (174.407,-36.342,208.252)
O6: (172.662,-31.125,201.941)
O4': (175.532,-35.601,206.209)
C8: (173.748,-34.362,204.452)
C2: (175.855,-30.766,203.367)
C6: (173.622,-31.411,202.618)
C5: (173.845,-32.550,203.413)
C4: (175.051,-32.669,204.093)
P: (171.919,-37.167,207.886)
C4': (175.526,-35.502,207.656)
C2': (176.346,-33.447,206.781)
O2': (177.731,-33.556,207.066)
N1: (174.695,-30.556,202.649)
N2: (176.778,-29.781,203.240)
N3: (176.082,-31.834,204.121)
N7: (173.012,-33.631,203.634)
N9: (174.987,-33.846,204.757)
O5': (173.176,-36.215,207.545)
O3': (175.882,-33.650,209.219)
C4: (171.834,-29.139,199.032)
N3: (172.785,-29.154,199.999)
OP1: (173.445,-24.444,193.503)
OP2: (171.971,-26.276,194.478)
C2: (173.822,-28.306,200.133)
C1': (174.936,-26.326,199.193)
C3': (176.365,-26.440,197.340)
O5': (174.023,-25.558,195.693)
O4': (174.592,-25.315,198.294)
C5': (175.059,-24.680,196.052)
P: (172.870,-25.129,194.693)
C4': (175.651,-25.110,197.348)
C2': (176.299,-26.858,198.790)
O2': (177.277,-26.172,199.553)
N1: (173.896,-27.342,199.147)
O4: (171.003,-30.014,199.113)
O2: (174.570,-28.469,201.060)
C6: (172.962,-27.270,198.145)
C5: (171.953,-28.128,198.044)
O3': (177.675,-26.349,196.851)
N3: (172.785,-29.154,199.999)
OP1: (173.445,-24.444,193.503)
OP2: (171.971,-26.276,194.478)
C2: (173.822,-28.306,200.133)
C1': (174.936,-26.326,199.193)
C3': (176.365,-26.440,197.340)
O5': (174.023,-25.558,195.693)
O4': (174.592,-25.315,198.294)
C5': (175.059,-24.680,196.052)
P: (172.870,-25.129,194.693)
C4': (175.651,-25.110,197.348)
C2': (176.299,-26.858,198.790)
O2': (177.277,-26.172,199.553)
N1: (173.896,-27.342,199.147)
O4: (171.003,-30.014,199.113)
O2: (174.570,-28.469,201.060)
C6: (172.962,-27.270,198.145)
C5: (171.953,-28.128,198.044)
O3': (177.675,-26.349,196.851)
Image (generated by PyMOL):