Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:054:045
Extra
PDB:
ATOM 1 O3' U A 53 51.100 148.922 37.851 1.00 51.98 O
ATOM 2 P G A 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 3 OP1 G A 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 4 OP2 G A 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 5 O5' G A 54 52.250 150.076 35.937 1.00 53.12 O
ATOM 6 C5' G A 54 51.113 150.012 35.063 1.00 51.30 C
ATOM 7 C4' G A 54 50.895 151.337 34.378 1.00 51.37 C
ATOM 8 O4' G A 54 50.590 152.371 35.347 1.00 52.80 O
ATOM 9 C3' G A 54 52.091 151.894 33.644 1.00 51.21 C
ATOM 10 O3' G A 54 52.252 151.284 32.389 1.00 51.61 O
ATOM 11 C2' G A 54 51.743 153.368 33.522 1.00 52.18 C
ATOM 12 O2' G A 54 50.825 153.635 32.482 1.00 52.31 O
ATOM 13 C1' G A 54 51.076 153.621 34.872 1.00 52.72 C
ATOM 14 N9 G A 54 51.984 154.181 35.869 1.00 53.18 N
ATOM 15 C8 G A 54 52.485 153.548 36.978 1.00 53.98 C
ATOM 16 N7 G A 54 53.231 154.321 37.715 1.00 55.07 N
ATOM 17 C5 G A 54 53.232 155.536 37.048 1.00 54.73 C
ATOM 18 C6 G A 54 53.855 156.761 37.382 1.00 55.82 C
ATOM 19 O6 G A 54 54.550 157.026 38.372 1.00 57.10 O
ATOM 20 N1 G A 54 53.601 157.739 36.427 1.00 54.69 N
ATOM 21 C2 G A 54 52.848 157.561 35.299 1.00 53.58 C
ATOM 22 N2 G A 54 52.736 158.620 34.496 1.00 51.91 N
ATOM 23 N3 G A 54 52.251 156.426 34.981 1.00 54.13 N
ATOM 24 C4 G A 54 52.482 155.462 35.897 1.00 53.75 C
ATOM 25 P C A 55 53.726 150.978 31.865 1.00 51.88 P
ATOM 26 OP1 C A 55 53.610 150.169 30.633 1.00 53.96 O
ATOM 27 OP2 C A 55 54.471 150.437 33.030 1.00 52.88 O
ATOM 28 O5' C A 55 54.302 152.418 31.491 1.00 53.60 O
TER
ATOM 1 O3' G B 44 60.472 164.625 39.267 1.00 48.05 O
ATOM 2 P U B 45 59.082 165.372 39.526 1.00 49.91 P
ATOM 3 OP1 U B 45 59.276 166.814 39.262 1.00 50.76 O
ATOM 4 OP2 U B 45 58.557 164.933 40.835 1.00 51.71 O
ATOM 5 O5' U B 45 58.125 164.789 38.406 1.00 49.56 O
ATOM 6 C5' U B 45 58.376 165.050 37.025 1.00 52.54 C
ATOM 7 C4' U B 45 57.413 164.262 36.185 1.00 54.52 C
ATOM 8 O4' U B 45 57.697 162.849 36.338 1.00 55.98 O
ATOM 9 C3' U B 45 55.959 164.410 36.604 1.00 53.71 C
ATOM 10 O3' U B 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 11 C2' U B 45 55.339 163.121 36.088 1.00 53.89 C
ATOM 12 O2' U B 45 55.063 163.201 34.707 1.00 54.11 O
ATOM 13 C1' U B 45 56.480 162.118 36.316 1.00 55.66 C
ATOM 14 N1 U B 45 56.373 161.327 37.556 1.00 54.30 N
ATOM 15 C2 U B 45 55.677 160.133 37.500 1.00 52.68 C
ATOM 16 O2 U B 45 55.201 159.691 36.473 1.00 50.93 O
ATOM 17 N3 U B 45 55.564 159.471 38.693 1.00 52.88 N
ATOM 18 C4 U B 45 56.074 159.858 39.909 1.00 53.10 C
ATOM 19 O4 U B 45 55.814 159.192 40.911 1.00 53.86 O
ATOM 20 C5 U B 45 56.810 161.080 39.882 1.00 53.69 C
ATOM 21 C6 U B 45 56.931 161.757 38.738 1.00 54.09 C
ATOM 22 P G B 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 23 OP1 G B 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 24 OP2 G B 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 25 O5' G B 46 53.104 165.794 37.005 1.00 54.35 O
TER
ATOM 2 P G A 54 52.483 148.950 37.041 1.00 54.25 P
ATOM 3 OP1 G A 54 52.626 147.654 36.343 1.00 54.62 O
ATOM 4 OP2 G A 54 53.546 149.398 37.979 1.00 53.66 O
ATOM 5 O5' G A 54 52.250 150.076 35.937 1.00 53.12 O
ATOM 6 C5' G A 54 51.113 150.012 35.063 1.00 51.30 C
ATOM 7 C4' G A 54 50.895 151.337 34.378 1.00 51.37 C
ATOM 8 O4' G A 54 50.590 152.371 35.347 1.00 52.80 O
ATOM 9 C3' G A 54 52.091 151.894 33.644 1.00 51.21 C
ATOM 10 O3' G A 54 52.252 151.284 32.389 1.00 51.61 O
ATOM 11 C2' G A 54 51.743 153.368 33.522 1.00 52.18 C
ATOM 12 O2' G A 54 50.825 153.635 32.482 1.00 52.31 O
ATOM 13 C1' G A 54 51.076 153.621 34.872 1.00 52.72 C
ATOM 14 N9 G A 54 51.984 154.181 35.869 1.00 53.18 N
ATOM 15 C8 G A 54 52.485 153.548 36.978 1.00 53.98 C
ATOM 16 N7 G A 54 53.231 154.321 37.715 1.00 55.07 N
ATOM 17 C5 G A 54 53.232 155.536 37.048 1.00 54.73 C
ATOM 18 C6 G A 54 53.855 156.761 37.382 1.00 55.82 C
ATOM 19 O6 G A 54 54.550 157.026 38.372 1.00 57.10 O
ATOM 20 N1 G A 54 53.601 157.739 36.427 1.00 54.69 N
ATOM 21 C2 G A 54 52.848 157.561 35.299 1.00 53.58 C
ATOM 22 N2 G A 54 52.736 158.620 34.496 1.00 51.91 N
ATOM 23 N3 G A 54 52.251 156.426 34.981 1.00 54.13 N
ATOM 24 C4 G A 54 52.482 155.462 35.897 1.00 53.75 C
ATOM 25 P C A 55 53.726 150.978 31.865 1.00 51.88 P
ATOM 26 OP1 C A 55 53.610 150.169 30.633 1.00 53.96 O
ATOM 27 OP2 C A 55 54.471 150.437 33.030 1.00 52.88 O
ATOM 28 O5' C A 55 54.302 152.418 31.491 1.00 53.60 O
TER
ATOM 1 O3' G B 44 60.472 164.625 39.267 1.00 48.05 O
ATOM 2 P U B 45 59.082 165.372 39.526 1.00 49.91 P
ATOM 3 OP1 U B 45 59.276 166.814 39.262 1.00 50.76 O
ATOM 4 OP2 U B 45 58.557 164.933 40.835 1.00 51.71 O
ATOM 5 O5' U B 45 58.125 164.789 38.406 1.00 49.56 O
ATOM 6 C5' U B 45 58.376 165.050 37.025 1.00 52.54 C
ATOM 7 C4' U B 45 57.413 164.262 36.185 1.00 54.52 C
ATOM 8 O4' U B 45 57.697 162.849 36.338 1.00 55.98 O
ATOM 9 C3' U B 45 55.959 164.410 36.604 1.00 53.71 C
ATOM 10 O3' U B 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 11 C2' U B 45 55.339 163.121 36.088 1.00 53.89 C
ATOM 12 O2' U B 45 55.063 163.201 34.707 1.00 54.11 O
ATOM 13 C1' U B 45 56.480 162.118 36.316 1.00 55.66 C
ATOM 14 N1 U B 45 56.373 161.327 37.556 1.00 54.30 N
ATOM 15 C2 U B 45 55.677 160.133 37.500 1.00 52.68 C
ATOM 16 O2 U B 45 55.201 159.691 36.473 1.00 50.93 O
ATOM 17 N3 U B 45 55.564 159.471 38.693 1.00 52.88 N
ATOM 18 C4 U B 45 56.074 159.858 39.909 1.00 53.10 C
ATOM 19 O4 U B 45 55.814 159.192 40.911 1.00 53.86 O
ATOM 20 C5 U B 45 56.810 161.080 39.882 1.00 53.69 C
ATOM 21 C6 U B 45 56.931 161.757 38.738 1.00 54.09 C
ATOM 22 P G B 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 23 OP1 G B 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 24 OP2 G B 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 25 O5' G B 46 53.104 165.794 37.005 1.00 54.35 O
TER
Atoms:
OP1: (52.626,147.654,36.343)
OP2: (53.546,149.398,37.979)
C3': (52.091,151.894,33.644)
C1': (51.076,153.621,34.872)
C5': (51.113,150.012,35.063)
O6: (54.550,157.026,38.372)
O4': (50.590,152.371,35.347)
C8: (52.485,153.548,36.978)
C2: (52.848,157.561,35.299)
C6: (53.855,156.761,37.382)
C5: (53.232,155.536,37.048)
C4: (52.482,155.462,35.897)
P: (52.483,148.950,37.041)
C4': (50.895,151.337,34.378)
C2': (51.743,153.368,33.522)
O2': (50.825,153.635,32.482)
N1: (53.601,157.739,36.427)
N2: (52.736,158.620,34.496)
N3: (52.251,156.426,34.981)
N7: (53.231,154.321,37.715)
N9: (51.984,154.181,35.869)
O5': (52.250,150.076,35.937)
O3': (52.252,151.284,32.389)
OP2: (53.546,149.398,37.979)
C3': (52.091,151.894,33.644)
C1': (51.076,153.621,34.872)
C5': (51.113,150.012,35.063)
O6: (54.550,157.026,38.372)
O4': (50.590,152.371,35.347)
C8: (52.485,153.548,36.978)
C2: (52.848,157.561,35.299)
C6: (53.855,156.761,37.382)
C5: (53.232,155.536,37.048)
C4: (52.482,155.462,35.897)
P: (52.483,148.950,37.041)
C4': (50.895,151.337,34.378)
C2': (51.743,153.368,33.522)
O2': (50.825,153.635,32.482)
N1: (53.601,157.739,36.427)
N2: (52.736,158.620,34.496)
N3: (52.251,156.426,34.981)
N7: (53.231,154.321,37.715)
N9: (51.984,154.181,35.869)
O5': (52.250,150.076,35.937)
O3': (52.252,151.284,32.389)
C4: (56.074,159.858,39.909)
N3: (55.564,159.471,38.693)
OP1: (59.276,166.814,39.262)
OP2: (58.557,164.933,40.835)
C2: (55.677,160.133,37.500)
C1': (56.480,162.118,36.316)
C3': (55.959,164.410,36.604)
O5': (58.125,164.789,38.406)
O4': (57.697,162.849,36.338)
C5': (58.376,165.050,37.025)
P: (59.082,165.372,39.526)
C4': (57.413,164.262,36.185)
C2': (55.339,163.121,36.088)
O2': (55.063,163.201,34.707)
N1: (56.373,161.327,37.556)
O4: (55.814,159.192,40.911)
O2: (55.201,159.691,36.473)
C6: (56.931,161.757,38.738)
C5: (56.810,161.080,39.882)
O3': (55.390,165.561,35.996)
N3: (55.564,159.471,38.693)
OP1: (59.276,166.814,39.262)
OP2: (58.557,164.933,40.835)
C2: (55.677,160.133,37.500)
C1': (56.480,162.118,36.316)
C3': (55.959,164.410,36.604)
O5': (58.125,164.789,38.406)
O4': (57.697,162.849,36.338)
C5': (58.376,165.050,37.025)
P: (59.082,165.372,39.526)
C4': (57.413,164.262,36.185)
C2': (55.339,163.121,36.088)
O2': (55.063,163.201,34.707)
N1: (56.373,161.327,37.556)
O4: (55.814,159.192,40.911)
O2: (55.201,159.691,36.473)
C6: (56.931,161.757,38.738)
C5: (56.810,161.080,39.882)
O3': (55.390,165.561,35.996)
Image (generated by PyMOL):