Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A648:A638
Extra
PDB:
ATOM 1 O3' G A 647 -123.220 -69.940 54.264 1.00 0.01 O
ATOM 2 P G A 648 -122.017 -71.004 54.408 1.00 0.01 P
ATOM 3 OP1 G A 648 -121.595 -71.361 53.029 1.00 0.01 O
ATOM 4 OP2 G A 648 -122.470 -72.080 55.321 1.00 0.01 O
ATOM 5 O5' G A 648 -120.892 -70.149 55.072 1.00 0.01 O
ATOM 6 C5' G A 648 -120.379 -69.048 54.367 1.00 0.01 C
ATOM 7 C4' G A 648 -119.166 -68.528 55.028 1.00 0.01 C
ATOM 8 O4' G A 648 -119.555 -67.808 56.206 1.00 0.01 O
ATOM 9 C3' G A 648 -118.215 -69.581 55.538 1.00 0.01 C
ATOM 10 O3' G A 648 -117.373 -70.090 54.524 1.00 0.01 O
ATOM 11 C2' G A 648 -117.476 -68.836 56.618 1.00 0.01 C
ATOM 12 O2' G A 648 -116.494 -67.991 56.043 1.00 0.01 O
ATOM 13 C1' G A 648 -118.582 -67.958 57.192 1.00 0.01 C
ATOM 14 N9 G A 648 -119.219 -68.539 58.373 1.00 0.01 N
ATOM 15 C8 G A 648 -120.451 -69.100 58.408 1.00 0.01 C
ATOM 16 N7 G A 648 -120.782 -69.483 59.602 1.00 0.01 N
ATOM 17 C5 G A 648 -119.709 -69.136 60.392 1.00 0.01 C
ATOM 18 C6 G A 648 -119.505 -69.315 61.773 1.00 0.01 C
ATOM 19 O6 G A 648 -120.281 -69.851 62.588 1.00 0.01 O
ATOM 20 N1 G A 648 -118.268 -68.818 62.163 1.00 0.01 N
ATOM 21 C2 G A 648 -117.359 -68.222 61.327 1.00 0.01 C
ATOM 22 N2 G A 648 -116.194 -67.785 61.841 1.00 0.01 N
ATOM 23 N3 G A 648 -117.569 -68.055 60.041 1.00 0.01 N
ATOM 24 C4 G A 648 -118.749 -68.535 59.649 1.00 0.01 C
ATOM 25 P C A 649 -116.799 -71.581 54.620 1.00 0.01 P
ATOM 26 OP1 C A 649 -116.013 -71.804 53.398 1.00 0.01 O
ATOM 27 OP2 C A 649 -117.935 -72.499 54.924 1.00 0.01 O
ATOM 28 O5' C A 649 -115.840 -71.488 55.857 1.00 0.01 O
TER
ATOM 1 O3' G B 637 -118.479 -71.426 71.751 1.00 0.01 O
ATOM 2 P U B 638 -119.338 -70.072 71.823 1.00 0.01 P
ATOM 3 OP1 U B 638 -119.260 -69.605 73.206 1.00 0.01 O
ATOM 4 OP2 U B 638 -120.669 -70.349 71.232 1.00 0.01 O
ATOM 5 O5' U B 638 -118.528 -69.112 70.886 1.00 0.01 O
ATOM 6 C5' U B 638 -117.122 -69.144 70.885 1.00 0.01 C
ATOM 7 C4' U B 638 -116.581 -68.556 69.619 1.00 0.01 C
ATOM 8 O4' U B 638 -116.710 -69.502 68.552 1.00 0.01 O
ATOM 9 C3' U B 638 -117.287 -67.316 69.121 1.00 0.01 C
ATOM 10 O3' U B 638 -116.794 -66.166 69.765 1.00 0.01 O
ATOM 11 C2' U B 638 -117.017 -67.347 67.630 1.00 0.01 C
ATOM 12 O2' U B 638 -115.757 -66.784 67.340 1.00 0.01 O
ATOM 13 C1' U B 638 -116.958 -68.844 67.349 1.00 0.01 C
ATOM 14 N1 U B 638 -118.205 -69.351 66.819 1.00 0.21 N
ATOM 15 C2 U B 638 -118.517 -68.912 65.593 1.00 0.21 C
ATOM 16 O2 U B 638 -117.787 -68.125 65.023 1.00 0.21 O
ATOM 17 N3 U B 638 -119.694 -69.400 65.108 1.00 0.21 N
ATOM 18 C4 U B 638 -120.568 -70.268 65.718 1.00 0.21 C
ATOM 19 O4 U B 638 -121.613 -70.608 65.142 1.00 0.21 O
ATOM 20 C5 U B 638 -120.147 -70.704 66.997 1.00 0.21 C
ATOM 21 C6 U B 638 -118.999 -70.235 67.487 1.00 0.21 C
ATOM 22 P C B 639 -117.381 -64.721 69.465 1.00 0.01 P
ATOM 23 OP1 C B 639 -116.437 -63.774 70.055 1.00 0.01 O
ATOM 24 OP2 C B 639 -118.780 -64.692 69.896 1.00 0.01 O
ATOM 25 O5' C B 639 -117.313 -64.615 67.901 1.00 0.01 O
TER
ATOM 2 P G A 648 -122.017 -71.004 54.408 1.00 0.01 P
ATOM 3 OP1 G A 648 -121.595 -71.361 53.029 1.00 0.01 O
ATOM 4 OP2 G A 648 -122.470 -72.080 55.321 1.00 0.01 O
ATOM 5 O5' G A 648 -120.892 -70.149 55.072 1.00 0.01 O
ATOM 6 C5' G A 648 -120.379 -69.048 54.367 1.00 0.01 C
ATOM 7 C4' G A 648 -119.166 -68.528 55.028 1.00 0.01 C
ATOM 8 O4' G A 648 -119.555 -67.808 56.206 1.00 0.01 O
ATOM 9 C3' G A 648 -118.215 -69.581 55.538 1.00 0.01 C
ATOM 10 O3' G A 648 -117.373 -70.090 54.524 1.00 0.01 O
ATOM 11 C2' G A 648 -117.476 -68.836 56.618 1.00 0.01 C
ATOM 12 O2' G A 648 -116.494 -67.991 56.043 1.00 0.01 O
ATOM 13 C1' G A 648 -118.582 -67.958 57.192 1.00 0.01 C
ATOM 14 N9 G A 648 -119.219 -68.539 58.373 1.00 0.01 N
ATOM 15 C8 G A 648 -120.451 -69.100 58.408 1.00 0.01 C
ATOM 16 N7 G A 648 -120.782 -69.483 59.602 1.00 0.01 N
ATOM 17 C5 G A 648 -119.709 -69.136 60.392 1.00 0.01 C
ATOM 18 C6 G A 648 -119.505 -69.315 61.773 1.00 0.01 C
ATOM 19 O6 G A 648 -120.281 -69.851 62.588 1.00 0.01 O
ATOM 20 N1 G A 648 -118.268 -68.818 62.163 1.00 0.01 N
ATOM 21 C2 G A 648 -117.359 -68.222 61.327 1.00 0.01 C
ATOM 22 N2 G A 648 -116.194 -67.785 61.841 1.00 0.01 N
ATOM 23 N3 G A 648 -117.569 -68.055 60.041 1.00 0.01 N
ATOM 24 C4 G A 648 -118.749 -68.535 59.649 1.00 0.01 C
ATOM 25 P C A 649 -116.799 -71.581 54.620 1.00 0.01 P
ATOM 26 OP1 C A 649 -116.013 -71.804 53.398 1.00 0.01 O
ATOM 27 OP2 C A 649 -117.935 -72.499 54.924 1.00 0.01 O
ATOM 28 O5' C A 649 -115.840 -71.488 55.857 1.00 0.01 O
TER
ATOM 1 O3' G B 637 -118.479 -71.426 71.751 1.00 0.01 O
ATOM 2 P U B 638 -119.338 -70.072 71.823 1.00 0.01 P
ATOM 3 OP1 U B 638 -119.260 -69.605 73.206 1.00 0.01 O
ATOM 4 OP2 U B 638 -120.669 -70.349 71.232 1.00 0.01 O
ATOM 5 O5' U B 638 -118.528 -69.112 70.886 1.00 0.01 O
ATOM 6 C5' U B 638 -117.122 -69.144 70.885 1.00 0.01 C
ATOM 7 C4' U B 638 -116.581 -68.556 69.619 1.00 0.01 C
ATOM 8 O4' U B 638 -116.710 -69.502 68.552 1.00 0.01 O
ATOM 9 C3' U B 638 -117.287 -67.316 69.121 1.00 0.01 C
ATOM 10 O3' U B 638 -116.794 -66.166 69.765 1.00 0.01 O
ATOM 11 C2' U B 638 -117.017 -67.347 67.630 1.00 0.01 C
ATOM 12 O2' U B 638 -115.757 -66.784 67.340 1.00 0.01 O
ATOM 13 C1' U B 638 -116.958 -68.844 67.349 1.00 0.01 C
ATOM 14 N1 U B 638 -118.205 -69.351 66.819 1.00 0.21 N
ATOM 15 C2 U B 638 -118.517 -68.912 65.593 1.00 0.21 C
ATOM 16 O2 U B 638 -117.787 -68.125 65.023 1.00 0.21 O
ATOM 17 N3 U B 638 -119.694 -69.400 65.108 1.00 0.21 N
ATOM 18 C4 U B 638 -120.568 -70.268 65.718 1.00 0.21 C
ATOM 19 O4 U B 638 -121.613 -70.608 65.142 1.00 0.21 O
ATOM 20 C5 U B 638 -120.147 -70.704 66.997 1.00 0.21 C
ATOM 21 C6 U B 638 -118.999 -70.235 67.487 1.00 0.21 C
ATOM 22 P C B 639 -117.381 -64.721 69.465 1.00 0.01 P
ATOM 23 OP1 C B 639 -116.437 -63.774 70.055 1.00 0.01 O
ATOM 24 OP2 C B 639 -118.780 -64.692 69.896 1.00 0.01 O
ATOM 25 O5' C B 639 -117.313 -64.615 67.901 1.00 0.01 O
TER
Atoms:
OP1: (-121.595,-71.361,53.029)
OP2: (-122.470,-72.080,55.321)
C3': (-118.215,-69.581,55.538)
C1': (-118.582,-67.958,57.192)
C5': (-120.379,-69.048,54.367)
O6: (-120.281,-69.851,62.588)
O4': (-119.555,-67.808,56.206)
C8: (-120.451,-69.100,58.408)
C2: (-117.359,-68.222,61.327)
C6: (-119.505,-69.315,61.773)
C5: (-119.709,-69.136,60.392)
C4: (-118.749,-68.535,59.649)
P: (-122.017,-71.004,54.408)
C4': (-119.166,-68.528,55.028)
C2': (-117.476,-68.836,56.618)
O2': (-116.494,-67.991,56.043)
N1: (-118.268,-68.818,62.163)
N2: (-116.194,-67.785,61.841)
N3: (-117.569,-68.055,60.041)
N7: (-120.782,-69.483,59.602)
N9: (-119.219,-68.539,58.373)
O5': (-120.892,-70.149,55.072)
O3': (-117.373,-70.090,54.524)
OP2: (-122.470,-72.080,55.321)
C3': (-118.215,-69.581,55.538)
C1': (-118.582,-67.958,57.192)
C5': (-120.379,-69.048,54.367)
O6: (-120.281,-69.851,62.588)
O4': (-119.555,-67.808,56.206)
C8: (-120.451,-69.100,58.408)
C2: (-117.359,-68.222,61.327)
C6: (-119.505,-69.315,61.773)
C5: (-119.709,-69.136,60.392)
C4: (-118.749,-68.535,59.649)
P: (-122.017,-71.004,54.408)
C4': (-119.166,-68.528,55.028)
C2': (-117.476,-68.836,56.618)
O2': (-116.494,-67.991,56.043)
N1: (-118.268,-68.818,62.163)
N2: (-116.194,-67.785,61.841)
N3: (-117.569,-68.055,60.041)
N7: (-120.782,-69.483,59.602)
N9: (-119.219,-68.539,58.373)
O5': (-120.892,-70.149,55.072)
O3': (-117.373,-70.090,54.524)
C4: (-120.568,-70.268,65.718)
N3: (-119.694,-69.400,65.108)
OP1: (-119.260,-69.605,73.206)
OP2: (-120.669,-70.349,71.232)
C2: (-118.517,-68.912,65.593)
C1': (-116.958,-68.844,67.349)
C3': (-117.287,-67.316,69.121)
O5': (-118.528,-69.112,70.886)
O4': (-116.710,-69.502,68.552)
C5': (-117.122,-69.144,70.885)
P: (-119.338,-70.072,71.823)
C4': (-116.581,-68.556,69.619)
C2': (-117.017,-67.347,67.630)
O2': (-115.757,-66.784,67.340)
N1: (-118.205,-69.351,66.819)
O4: (-121.613,-70.608,65.142)
O2: (-117.787,-68.125,65.023)
C6: (-118.999,-70.235,67.487)
C5: (-120.147,-70.704,66.997)
O3': (-116.794,-66.166,69.765)
N3: (-119.694,-69.400,65.108)
OP1: (-119.260,-69.605,73.206)
OP2: (-120.669,-70.349,71.232)
C2: (-118.517,-68.912,65.593)
C1': (-116.958,-68.844,67.349)
C3': (-117.287,-67.316,69.121)
O5': (-118.528,-69.112,70.886)
O4': (-116.710,-69.502,68.552)
C5': (-117.122,-69.144,70.885)
P: (-119.338,-70.072,71.823)
C4': (-116.581,-68.556,69.619)
C2': (-117.017,-67.347,67.630)
O2': (-115.757,-66.784,67.340)
N1: (-118.205,-69.351,66.819)
O4: (-121.613,-70.608,65.142)
O2: (-117.787,-68.125,65.023)
C6: (-118.999,-70.235,67.487)
C5: (-120.147,-70.704,66.997)
O3': (-116.794,-66.166,69.765)
Image (generated by PyMOL):