ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02366:02336

Extra

PDB:
ATOM 1 O3' G A2365 57.460 110.753 124.040 1.00 35.91 O
ATOM 2 P G A2366 56.723 110.996 122.640 1.00 37.13 P
ATOM 3 OP1 G A2366 55.890 112.217 122.769 1.00 37.75 O
ATOM 4 OP2 G A2366 56.111 109.729 122.188 1.00 36.75 O
ATOM 5 O5' G A2366 57.908 111.322 121.642 1.00 37.64 O
ATOM 6 C5' G A2366 58.892 112.299 121.979 1.00 38.86 C
ATOM 7 C4' G A2366 60.109 112.093 121.129 1.00 38.61 C
ATOM 8 O4' G A2366 60.601 110.746 121.373 1.00 39.03 O
ATOM 9 C3' G A2366 59.849 112.191 119.632 1.00 38.71 C
ATOM 10 O3' G A2366 61.000 112.737 119.000 1.00 41.88 O
ATOM 11 C2' G A2366 59.622 110.734 119.239 1.00 36.91 C
ATOM 12 O2' G A2366 59.925 110.456 117.891 1.00 35.71 O
ATOM 13 C1' G A2366 60.592 110.008 120.170 1.00 38.16 C
ATOM 14 N9 G A2366 60.208 108.630 120.473 1.00 37.56 N
ATOM 15 C8 G A2366 58.961 108.180 120.834 1.00 37.47 C
ATOM 16 N7 G A2366 58.906 106.886 120.985 1.00 37.13 N
ATOM 17 C5 G A2366 60.197 106.453 120.721 1.00 38.56 C
ATOM 18 C6 G A2366 60.742 105.138 120.713 1.00 39.86 C
ATOM 19 O6 G A2366 60.164 104.065 120.935 1.00 40.59 O
ATOM 20 N1 G A2366 62.102 105.147 120.401 1.00 39.15 N
ATOM 21 C2 G A2366 62.840 106.275 120.128 1.00 38.22 C
ATOM 22 N2 G A2366 64.134 106.081 119.855 1.00 34.23 N
ATOM 23 N3 G A2366 62.340 107.505 120.124 1.00 39.64 N
ATOM 24 C4 G A2366 61.020 107.519 120.424 1.00 38.36 C
ATOM 25 P C A2367 61.103 114.324 118.749 1.00 43.88 P
ATOM 26 OP1 C A2367 60.382 115.043 119.819 1.00 43.32 O
ATOM 27 OP2 C A2367 60.755 114.600 117.336 1.00 46.77 O
ATOM 28 O5' C A2367 62.662 114.592 118.910 1.00 48.33 O
TER

ATOM 1 O3' G B2335 69.354 97.065 120.469 1.00 47.53 O
ATOM 2 P U B2336 69.821 98.042 121.664 1.00 48.52 P
ATOM 3 OP1 U B2336 70.976 97.387 122.328 1.00 50.81 O
ATOM 4 OP2 U B2336 68.628 98.416 122.470 1.00 49.06 O
ATOM 5 O5' U B2336 70.376 99.340 120.933 1.00 45.60 O
ATOM 6 C5' U B2336 71.644 99.327 120.267 1.00 42.17 C
ATOM 7 C4' U B2336 71.962 100.704 119.743 1.00 41.94 C
ATOM 8 O4' U B2336 70.949 101.088 118.780 1.00 41.09 O
ATOM 9 C3' U B2336 71.933 101.826 120.766 1.00 41.45 C
ATOM 10 O3' U B2336 73.153 101.899 121.508 1.00 41.99 O
ATOM 11 C2' U B2336 71.698 103.051 119.890 1.00 39.99 C
ATOM 12 O2' U B2336 72.859 103.474 119.213 1.00 40.12 O
ATOM 13 C1' U B2336 70.740 102.489 118.843 1.00 39.97 C
ATOM 14 N1 U B2336 69.314 102.752 119.097 1.00 38.88 N
ATOM 15 C2 U B2336 68.829 104.019 118.799 1.00 37.70 C
ATOM 16 O2 U B2336 69.535 104.920 118.363 1.00 37.02 O
ATOM 17 N3 U B2336 67.489 104.194 119.032 1.00 34.83 N
ATOM 18 C4 U B2336 66.605 103.267 119.523 1.00 35.11 C
ATOM 19 O4 U B2336 65.432 103.586 119.692 1.00 35.95 O
ATOM 20 C5 U B2336 67.177 101.991 119.816 1.00 37.10 C
ATOM 21 C6 U B2336 68.478 101.781 119.601 1.00 37.80 C
ATOM 22 P C B2337 73.138 102.458 123.019 1.00 43.11 P
ATOM 23 OP1 C B2337 74.548 102.694 123.405 1.00 42.24 O
ATOM 24 OP2 C B2337 72.273 101.601 123.873 1.00 40.86 O
ATOM 25 O5' C B2337 72.442 103.883 122.888 1.00 42.85 O
TER

Atoms:
OP1: (55.890,112.217,122.769)
OP2: (56.111,109.729,122.188)
C3': (59.849,112.191,119.632)
C1': (60.592,110.008,120.170)
C5': (58.892,112.299,121.979)
O6: (60.164,104.065,120.935)
O4': (60.601,110.746,121.373)
C8: (58.961,108.180,120.834)
C2: (62.840,106.275,120.128)
C6: (60.742,105.138,120.713)
C5: (60.197,106.453,120.721)
C4: (61.020,107.519,120.424)
P: (56.723,110.996,122.640)
C4': (60.109,112.093,121.129)
C2': (59.622,110.734,119.239)
O2': (59.925,110.456,117.891)
N1: (62.102,105.147,120.401)
N2: (64.134,106.081,119.855)
N3: (62.340,107.505,120.124)
N7: (58.906,106.886,120.985)
N9: (60.208,108.630,120.473)
O5': (57.908,111.322,121.642)
O3': (61.000,112.737,119.000)
C4: (66.605,103.267,119.523)
N3: (67.489,104.194,119.032)
OP1: (70.976,97.387,122.328)
OP2: (68.628,98.416,122.470)
C2: (68.829,104.019,118.799)
C1': (70.740,102.489,118.843)
C3': (71.933,101.826,120.766)
O5': (70.376,99.340,120.933)
O4': (70.949,101.088,118.780)
C5': (71.644,99.327,120.267)
P: (69.821,98.042,121.664)
C4': (71.962,100.704,119.743)
C2': (71.698,103.051,119.890)
O2': (72.859,103.474,119.213)
N1: (69.314,102.752,119.097)
O4: (65.432,103.586,119.692)
O2: (69.535,104.920,118.363)
C6: (68.478,101.781,119.601)
C5: (67.177,101.991,119.816)
O3': (73.153,101.899,121.508)
Image (generated by PyMOL):
PyMOL image
show in jmol