Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1225:A1210
Extra
PDB:
ATOM 1 O3' U A1224 -57.747-119.708 29.270 1.00 0.02 O
ATOM 2 P G A1225 -56.296-119.048 29.129 1.00 0.01 P
ATOM 3 OP1 G A1225 -55.319-120.112 29.471 1.00 0.01 O
ATOM 4 OP2 G A1225 -56.314-117.792 29.939 1.00 0.01 O
ATOM 5 O5' G A1225 -56.200-118.712 27.578 1.00 0.01 O
ATOM 6 C5' G A1225 -55.666-119.656 26.693 1.00 0.01 C
ATOM 7 C4' G A1225 -55.381-119.053 25.361 1.00 0.01 C
ATOM 8 O4' G A1225 -56.493-118.236 24.938 1.00 0.01 O
ATOM 9 C3' G A1225 -54.221-118.096 25.293 1.00 0.01 C
ATOM 10 O3' G A1225 -52.961-118.728 25.327 1.00 0.01 O
ATOM 11 C2' G A1225 -54.505-117.391 23.994 1.00 0.01 C
ATOM 12 O2' G A1225 -54.238-118.247 22.905 1.00 0.01 O
ATOM 13 C1' G A1225 -56.012-117.207 24.099 1.00 0.01 C
ATOM 14 N9 G A1225 -56.371-115.903 24.691 1.00 0.01 N
ATOM 15 C8 G A1225 -56.894-115.698 25.938 1.00 0.01 C
ATOM 16 N7 G A1225 -57.139-114.458 26.198 1.00 0.01 N
ATOM 17 C5 G A1225 -56.757-113.795 25.042 1.00 0.01 C
ATOM 18 C6 G A1225 -56.781-112.418 24.710 1.00 0.01 C
ATOM 19 O6 G A1225 -57.130-111.435 25.347 1.00 0.01 O
ATOM 20 N1 G A1225 -56.290-112.181 23.467 1.00 0.01 N
ATOM 21 C2 G A1225 -55.823-113.111 22.608 1.00 0.01 C
ATOM 22 N2 G A1225 -55.399-112.592 21.431 1.00 0.01 N
ATOM 23 N3 G A1225 -55.809-114.401 22.892 1.00 0.01 N
ATOM 24 C4 G A1225 -56.278-114.670 24.113 1.00 0.01 C
ATOM 25 P C A1226 -51.809-118.155 26.288 1.00 0.01 P
ATOM 26 OP1 C A1226 -50.721-119.142 26.289 1.00 0.01 O
ATOM 27 OP2 C A1226 -52.454-117.780 27.584 1.00 0.01 O
ATOM 28 O5' C A1226 -51.337-116.857 25.519 1.00 0.01 O
TER
ATOM 1 O3' G B1209 -56.595-101.602 24.524 1.00 0.01 O
ATOM 2 P U B1210 -57.825-102.138 23.670 1.00 0.01 P
ATOM 3 OP1 U B1210 -57.995-101.214 22.544 1.00 0.01 O
ATOM 4 OP2 U B1210 -58.945-102.349 24.582 1.00 0.01 O
ATOM 5 O5' U B1210 -57.302-103.519 23.139 1.00 0.01 O
ATOM 6 C5' U B1210 -56.484-103.568 21.987 1.00 0.01 C
ATOM 7 C4' U B1210 -56.043-104.965 21.680 1.00 0.01 C
ATOM 8 O4' U B1210 -55.542-105.587 22.871 1.00 0.01 O
ATOM 9 C3' U B1210 -57.125-105.898 21.220 1.00 0.01 C
ATOM 10 O3' U B1210 -57.406-105.745 19.863 1.00 0.01 O
ATOM 11 C2' U B1210 -56.555-107.253 21.556 1.00 0.01 C
ATOM 12 O2' U B1210 -55.583-107.646 20.589 1.00 0.01 O
ATOM 13 C1' U B1210 -55.840-106.953 22.859 1.00 0.01 C
ATOM 14 N1 U B1210 -56.658-107.275 24.031 1.00 0.10 N
ATOM 15 C2 U B1210 -57.006-108.565 24.064 1.00 0.10 C
ATOM 16 O2 U B1210 -56.685-109.312 23.178 1.00 0.10 O
ATOM 17 N3 U B1210 -57.734-108.954 25.132 1.00 0.10 N
ATOM 18 C4 U B1210 -58.143-108.198 26.177 1.00 0.10 C
ATOM 19 O4 U B1210 -58.794-108.766 27.042 1.00 0.10 O
ATOM 20 C5 U B1210 -57.743-106.839 26.115 1.00 0.10 C
ATOM 21 C6 U B1210 -57.021-106.446 25.059 1.00 0.10 C
ATOM 22 P G B1211 -58.854-106.071 19.327 1.00 0.01 P
ATOM 23 OP1 G B1211 -59.099-105.142 18.209 1.00 0.01 O
ATOM 24 OP2 G B1211 -59.784-106.053 20.487 1.00 0.01 O
ATOM 25 O5' G B1211 -58.676-107.555 18.795 1.00 0.01 O
TER
ATOM 2 P G A1225 -56.296-119.048 29.129 1.00 0.01 P
ATOM 3 OP1 G A1225 -55.319-120.112 29.471 1.00 0.01 O
ATOM 4 OP2 G A1225 -56.314-117.792 29.939 1.00 0.01 O
ATOM 5 O5' G A1225 -56.200-118.712 27.578 1.00 0.01 O
ATOM 6 C5' G A1225 -55.666-119.656 26.693 1.00 0.01 C
ATOM 7 C4' G A1225 -55.381-119.053 25.361 1.00 0.01 C
ATOM 8 O4' G A1225 -56.493-118.236 24.938 1.00 0.01 O
ATOM 9 C3' G A1225 -54.221-118.096 25.293 1.00 0.01 C
ATOM 10 O3' G A1225 -52.961-118.728 25.327 1.00 0.01 O
ATOM 11 C2' G A1225 -54.505-117.391 23.994 1.00 0.01 C
ATOM 12 O2' G A1225 -54.238-118.247 22.905 1.00 0.01 O
ATOM 13 C1' G A1225 -56.012-117.207 24.099 1.00 0.01 C
ATOM 14 N9 G A1225 -56.371-115.903 24.691 1.00 0.01 N
ATOM 15 C8 G A1225 -56.894-115.698 25.938 1.00 0.01 C
ATOM 16 N7 G A1225 -57.139-114.458 26.198 1.00 0.01 N
ATOM 17 C5 G A1225 -56.757-113.795 25.042 1.00 0.01 C
ATOM 18 C6 G A1225 -56.781-112.418 24.710 1.00 0.01 C
ATOM 19 O6 G A1225 -57.130-111.435 25.347 1.00 0.01 O
ATOM 20 N1 G A1225 -56.290-112.181 23.467 1.00 0.01 N
ATOM 21 C2 G A1225 -55.823-113.111 22.608 1.00 0.01 C
ATOM 22 N2 G A1225 -55.399-112.592 21.431 1.00 0.01 N
ATOM 23 N3 G A1225 -55.809-114.401 22.892 1.00 0.01 N
ATOM 24 C4 G A1225 -56.278-114.670 24.113 1.00 0.01 C
ATOM 25 P C A1226 -51.809-118.155 26.288 1.00 0.01 P
ATOM 26 OP1 C A1226 -50.721-119.142 26.289 1.00 0.01 O
ATOM 27 OP2 C A1226 -52.454-117.780 27.584 1.00 0.01 O
ATOM 28 O5' C A1226 -51.337-116.857 25.519 1.00 0.01 O
TER
ATOM 1 O3' G B1209 -56.595-101.602 24.524 1.00 0.01 O
ATOM 2 P U B1210 -57.825-102.138 23.670 1.00 0.01 P
ATOM 3 OP1 U B1210 -57.995-101.214 22.544 1.00 0.01 O
ATOM 4 OP2 U B1210 -58.945-102.349 24.582 1.00 0.01 O
ATOM 5 O5' U B1210 -57.302-103.519 23.139 1.00 0.01 O
ATOM 6 C5' U B1210 -56.484-103.568 21.987 1.00 0.01 C
ATOM 7 C4' U B1210 -56.043-104.965 21.680 1.00 0.01 C
ATOM 8 O4' U B1210 -55.542-105.587 22.871 1.00 0.01 O
ATOM 9 C3' U B1210 -57.125-105.898 21.220 1.00 0.01 C
ATOM 10 O3' U B1210 -57.406-105.745 19.863 1.00 0.01 O
ATOM 11 C2' U B1210 -56.555-107.253 21.556 1.00 0.01 C
ATOM 12 O2' U B1210 -55.583-107.646 20.589 1.00 0.01 O
ATOM 13 C1' U B1210 -55.840-106.953 22.859 1.00 0.01 C
ATOM 14 N1 U B1210 -56.658-107.275 24.031 1.00 0.10 N
ATOM 15 C2 U B1210 -57.006-108.565 24.064 1.00 0.10 C
ATOM 16 O2 U B1210 -56.685-109.312 23.178 1.00 0.10 O
ATOM 17 N3 U B1210 -57.734-108.954 25.132 1.00 0.10 N
ATOM 18 C4 U B1210 -58.143-108.198 26.177 1.00 0.10 C
ATOM 19 O4 U B1210 -58.794-108.766 27.042 1.00 0.10 O
ATOM 20 C5 U B1210 -57.743-106.839 26.115 1.00 0.10 C
ATOM 21 C6 U B1210 -57.021-106.446 25.059 1.00 0.10 C
ATOM 22 P G B1211 -58.854-106.071 19.327 1.00 0.01 P
ATOM 23 OP1 G B1211 -59.099-105.142 18.209 1.00 0.01 O
ATOM 24 OP2 G B1211 -59.784-106.053 20.487 1.00 0.01 O
ATOM 25 O5' G B1211 -58.676-107.555 18.795 1.00 0.01 O
TER
Atoms:
OP1: (-55.319,-120.112,29.471)
OP2: (-56.314,-117.792,29.939)
C3': (-54.221,-118.096,25.293)
C1': (-56.012,-117.207,24.099)
C5': (-55.666,-119.656,26.693)
O6: (-57.130,-111.435,25.347)
O4': (-56.493,-118.236,24.938)
C8: (-56.894,-115.698,25.938)
C2: (-55.823,-113.111,22.608)
C6: (-56.781,-112.418,24.710)
C5: (-56.757,-113.795,25.042)
C4: (-56.278,-114.670,24.113)
P: (-56.296,-119.048,29.129)
C4': (-55.381,-119.053,25.361)
C2': (-54.505,-117.391,23.994)
O2': (-54.238,-118.247,22.905)
N1: (-56.290,-112.181,23.467)
N2: (-55.399,-112.592,21.431)
N3: (-55.809,-114.401,22.892)
N7: (-57.139,-114.458,26.198)
N9: (-56.371,-115.903,24.691)
O5': (-56.200,-118.712,27.578)
O3': (-52.961,-118.728,25.327)
OP2: (-56.314,-117.792,29.939)
C3': (-54.221,-118.096,25.293)
C1': (-56.012,-117.207,24.099)
C5': (-55.666,-119.656,26.693)
O6: (-57.130,-111.435,25.347)
O4': (-56.493,-118.236,24.938)
C8: (-56.894,-115.698,25.938)
C2: (-55.823,-113.111,22.608)
C6: (-56.781,-112.418,24.710)
C5: (-56.757,-113.795,25.042)
C4: (-56.278,-114.670,24.113)
P: (-56.296,-119.048,29.129)
C4': (-55.381,-119.053,25.361)
C2': (-54.505,-117.391,23.994)
O2': (-54.238,-118.247,22.905)
N1: (-56.290,-112.181,23.467)
N2: (-55.399,-112.592,21.431)
N3: (-55.809,-114.401,22.892)
N7: (-57.139,-114.458,26.198)
N9: (-56.371,-115.903,24.691)
O5': (-56.200,-118.712,27.578)
O3': (-52.961,-118.728,25.327)
C4: (-58.143,-108.198,26.177)
N3: (-57.734,-108.954,25.132)
OP1: (-57.995,-101.214,22.544)
OP2: (-58.945,-102.349,24.582)
C2: (-57.006,-108.565,24.064)
C1': (-55.840,-106.953,22.859)
C3': (-57.125,-105.898,21.220)
O5': (-57.302,-103.519,23.139)
O4': (-55.542,-105.587,22.871)
C5': (-56.484,-103.568,21.987)
P: (-57.825,-102.138,23.670)
C4': (-56.043,-104.965,21.680)
C2': (-56.555,-107.253,21.556)
O2': (-55.583,-107.646,20.589)
N1: (-56.658,-107.275,24.031)
O4: (-58.794,-108.766,27.042)
O2: (-56.685,-109.312,23.178)
C6: (-57.021,-106.446,25.059)
C5: (-57.743,-106.839,26.115)
O3': (-57.406,-105.745,19.863)
N3: (-57.734,-108.954,25.132)
OP1: (-57.995,-101.214,22.544)
OP2: (-58.945,-102.349,24.582)
C2: (-57.006,-108.565,24.064)
C1': (-55.840,-106.953,22.859)
C3': (-57.125,-105.898,21.220)
O5': (-57.302,-103.519,23.139)
O4': (-55.542,-105.587,22.871)
C5': (-56.484,-103.568,21.987)
P: (-57.825,-102.138,23.670)
C4': (-56.043,-104.965,21.680)
C2': (-56.555,-107.253,21.556)
O2': (-55.583,-107.646,20.589)
N1: (-56.658,-107.275,24.031)
O4: (-58.794,-108.766,27.042)
O2: (-56.685,-109.312,23.178)
C6: (-57.021,-106.446,25.059)
C5: (-57.743,-106.839,26.115)
O3': (-57.406,-105.745,19.863)
Image (generated by PyMOL):