Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DS7:A42:A54
Extra
PDB:
ATOM 1 O3' G A 41 -5.345 20.612 -33.034 1.00 20.99 O
ATOM 2 P G A 42 -5.234 20.025 -34.497 1.00 22.33 P
ATOM 3 OP1 G A 42 -5.211 21.153 -35.485 1.00 24.70 O
ATOM 4 OP2 G A 42 -6.249 18.927 -34.669 1.00 22.46 O
ATOM 5 O5' G A 42 -3.819 19.260 -34.542 1.00 20.92 O
ATOM 6 C5' G A 42 -2.570 19.978 -34.439 1.00 18.75 C
ATOM 7 C4' G A 42 -1.401 18.989 -34.446 1.00 20.09 C
ATOM 8 O4' G A 42 -1.477 18.145 -33.266 1.00 19.67 O
ATOM 9 C3' G A 42 -1.363 17.960 -35.573 1.00 20.00 C
ATOM 10 O3' G A 42 -0.694 18.520 -36.703 1.00 18.67 O
ATOM 11 C2' G A 42 -0.464 16.866 -34.971 1.00 19.17 C
ATOM 12 O2' G A 42 0.898 17.302 -34.983 1.00 14.90 O
ATOM 13 C1' G A 42 -0.986 16.844 -33.544 1.00 19.89 C
ATOM 14 N9 G A 42 -2.074 15.855 -33.444 1.00 16.84 N
ATOM 15 C8 G A 42 -3.441 16.049 -33.350 1.00 19.16 C
ATOM 16 N7 G A 42 -4.132 14.902 -33.337 1.00 17.41 N
ATOM 17 C5 G A 42 -3.172 13.912 -33.431 1.00 16.21 C
ATOM 18 C6 G A 42 -3.331 12.513 -33.406 1.00 18.37 C
ATOM 19 O6 G A 42 -4.395 11.886 -33.328 1.00 15.55 O
ATOM 20 N1 G A 42 -2.092 11.839 -33.473 1.00 17.50 N
ATOM 21 C2 G A 42 -0.866 12.469 -33.553 1.00 19.75 C
ATOM 22 N2 G A 42 0.204 11.678 -33.679 1.00 17.47 N
ATOM 23 N3 G A 42 -0.715 13.814 -33.552 1.00 16.54 N
ATOM 24 C4 G A 42 -1.891 14.455 -33.495 1.00 17.58 C
ATOM 25 P C A 43 -1.173 18.190 -38.156 1.00 18.58 P
ATOM 26 OP1 C A 43 -0.338 18.949 -39.098 1.00 17.35 O
ATOM 27 OP2 C A 43 -2.699 18.292 -38.341 1.00 15.85 O
ATOM 28 O5' C A 43 -0.742 16.631 -38.379 1.00 17.23 O
TER
ATOM 1 O3' G B 53 -6.097 2.301 -33.445 1.00 15.62 O
ATOM 2 P U B 54 -5.607 2.595 -31.971 1.00 17.73 P
ATOM 3 OP1 U B 54 -5.160 1.215 -31.508 1.00 19.50 O
ATOM 4 OP2 U B 54 -6.455 3.389 -31.107 1.00 18.03 O
ATOM 5 O5' U B 54 -4.261 3.475 -32.178 1.00 16.78 O
ATOM 6 C5' U B 54 -3.198 3.000 -32.967 1.00 16.12 C
ATOM 7 C4' U B 54 -2.142 4.129 -33.171 1.00 16.29 C
ATOM 8 O4' U B 54 -2.706 5.094 -34.092 1.00 16.20 O
ATOM 9 C3' U B 54 -1.682 4.921 -31.969 1.00 16.80 C
ATOM 10 O3' U B 54 -0.651 4.222 -31.274 1.00 15.07 O
ATOM 11 C2' U B 54 -1.256 6.258 -32.619 1.00 14.46 C
ATOM 12 O2' U B 54 0.015 6.168 -33.316 1.00 15.66 O
ATOM 13 C1' U B 54 -2.340 6.409 -33.688 1.00 16.00 C
ATOM 14 N1 U B 54 -3.528 7.121 -33.212 1.00 17.91 N
ATOM 15 C2 U B 54 -3.452 8.501 -33.277 1.00 16.32 C
ATOM 16 O2 U B 54 -2.408 9.089 -33.597 1.00 18.46 O
ATOM 17 N3 U B 54 -4.583 9.159 -32.940 1.00 14.88 N
ATOM 18 C4 U B 54 -5.740 8.666 -32.491 1.00 17.66 C
ATOM 19 O4 U B 54 -6.684 9.440 -32.264 1.00 16.85 O
ATOM 20 C5 U B 54 -5.762 7.199 -32.377 1.00 17.23 C
ATOM 21 C6 U B 54 -4.655 6.510 -32.740 1.00 16.81 C
ATOM 22 P C B 55 -0.543 4.333 -29.714 1.00 18.89 P
ATOM 23 OP1 C B 55 0.339 3.162 -29.406 1.00 22.41 O
ATOM 24 OP2 C B 55 -1.907 4.412 -29.127 1.00 18.59 O
ATOM 25 O5' C B 55 0.197 5.752 -29.469 1.00 21.88 O
TER
ATOM 2 P G A 42 -5.234 20.025 -34.497 1.00 22.33 P
ATOM 3 OP1 G A 42 -5.211 21.153 -35.485 1.00 24.70 O
ATOM 4 OP2 G A 42 -6.249 18.927 -34.669 1.00 22.46 O
ATOM 5 O5' G A 42 -3.819 19.260 -34.542 1.00 20.92 O
ATOM 6 C5' G A 42 -2.570 19.978 -34.439 1.00 18.75 C
ATOM 7 C4' G A 42 -1.401 18.989 -34.446 1.00 20.09 C
ATOM 8 O4' G A 42 -1.477 18.145 -33.266 1.00 19.67 O
ATOM 9 C3' G A 42 -1.363 17.960 -35.573 1.00 20.00 C
ATOM 10 O3' G A 42 -0.694 18.520 -36.703 1.00 18.67 O
ATOM 11 C2' G A 42 -0.464 16.866 -34.971 1.00 19.17 C
ATOM 12 O2' G A 42 0.898 17.302 -34.983 1.00 14.90 O
ATOM 13 C1' G A 42 -0.986 16.844 -33.544 1.00 19.89 C
ATOM 14 N9 G A 42 -2.074 15.855 -33.444 1.00 16.84 N
ATOM 15 C8 G A 42 -3.441 16.049 -33.350 1.00 19.16 C
ATOM 16 N7 G A 42 -4.132 14.902 -33.337 1.00 17.41 N
ATOM 17 C5 G A 42 -3.172 13.912 -33.431 1.00 16.21 C
ATOM 18 C6 G A 42 -3.331 12.513 -33.406 1.00 18.37 C
ATOM 19 O6 G A 42 -4.395 11.886 -33.328 1.00 15.55 O
ATOM 20 N1 G A 42 -2.092 11.839 -33.473 1.00 17.50 N
ATOM 21 C2 G A 42 -0.866 12.469 -33.553 1.00 19.75 C
ATOM 22 N2 G A 42 0.204 11.678 -33.679 1.00 17.47 N
ATOM 23 N3 G A 42 -0.715 13.814 -33.552 1.00 16.54 N
ATOM 24 C4 G A 42 -1.891 14.455 -33.495 1.00 17.58 C
ATOM 25 P C A 43 -1.173 18.190 -38.156 1.00 18.58 P
ATOM 26 OP1 C A 43 -0.338 18.949 -39.098 1.00 17.35 O
ATOM 27 OP2 C A 43 -2.699 18.292 -38.341 1.00 15.85 O
ATOM 28 O5' C A 43 -0.742 16.631 -38.379 1.00 17.23 O
TER
ATOM 1 O3' G B 53 -6.097 2.301 -33.445 1.00 15.62 O
ATOM 2 P U B 54 -5.607 2.595 -31.971 1.00 17.73 P
ATOM 3 OP1 U B 54 -5.160 1.215 -31.508 1.00 19.50 O
ATOM 4 OP2 U B 54 -6.455 3.389 -31.107 1.00 18.03 O
ATOM 5 O5' U B 54 -4.261 3.475 -32.178 1.00 16.78 O
ATOM 6 C5' U B 54 -3.198 3.000 -32.967 1.00 16.12 C
ATOM 7 C4' U B 54 -2.142 4.129 -33.171 1.00 16.29 C
ATOM 8 O4' U B 54 -2.706 5.094 -34.092 1.00 16.20 O
ATOM 9 C3' U B 54 -1.682 4.921 -31.969 1.00 16.80 C
ATOM 10 O3' U B 54 -0.651 4.222 -31.274 1.00 15.07 O
ATOM 11 C2' U B 54 -1.256 6.258 -32.619 1.00 14.46 C
ATOM 12 O2' U B 54 0.015 6.168 -33.316 1.00 15.66 O
ATOM 13 C1' U B 54 -2.340 6.409 -33.688 1.00 16.00 C
ATOM 14 N1 U B 54 -3.528 7.121 -33.212 1.00 17.91 N
ATOM 15 C2 U B 54 -3.452 8.501 -33.277 1.00 16.32 C
ATOM 16 O2 U B 54 -2.408 9.089 -33.597 1.00 18.46 O
ATOM 17 N3 U B 54 -4.583 9.159 -32.940 1.00 14.88 N
ATOM 18 C4 U B 54 -5.740 8.666 -32.491 1.00 17.66 C
ATOM 19 O4 U B 54 -6.684 9.440 -32.264 1.00 16.85 O
ATOM 20 C5 U B 54 -5.762 7.199 -32.377 1.00 17.23 C
ATOM 21 C6 U B 54 -4.655 6.510 -32.740 1.00 16.81 C
ATOM 22 P C B 55 -0.543 4.333 -29.714 1.00 18.89 P
ATOM 23 OP1 C B 55 0.339 3.162 -29.406 1.00 22.41 O
ATOM 24 OP2 C B 55 -1.907 4.412 -29.127 1.00 18.59 O
ATOM 25 O5' C B 55 0.197 5.752 -29.469 1.00 21.88 O
TER
Atoms:
OP1: (-5.211,21.153,-35.485)
OP2: (-6.249,18.927,-34.669)
C3': (-1.363,17.960,-35.573)
C1': (-0.986,16.844,-33.544)
C5': (-2.570,19.978,-34.439)
O6: (-4.395,11.886,-33.328)
O4': (-1.477,18.145,-33.266)
C8: (-3.441,16.049,-33.350)
C2: (-0.866,12.469,-33.553)
C6: (-3.331,12.513,-33.406)
C5: (-3.172,13.912,-33.431)
C4: (-1.891,14.455,-33.495)
P: (-5.234,20.025,-34.497)
C4': (-1.401,18.989,-34.446)
C2': (-0.464,16.866,-34.971)
O2': (0.898,17.302,-34.983)
N1: (-2.092,11.839,-33.473)
N2: (0.204,11.678,-33.679)
N3: (-0.715,13.814,-33.552)
N7: (-4.132,14.902,-33.337)
N9: (-2.074,15.855,-33.444)
O5': (-3.819,19.260,-34.542)
O3': (-0.694,18.520,-36.703)
OP2: (-6.249,18.927,-34.669)
C3': (-1.363,17.960,-35.573)
C1': (-0.986,16.844,-33.544)
C5': (-2.570,19.978,-34.439)
O6: (-4.395,11.886,-33.328)
O4': (-1.477,18.145,-33.266)
C8: (-3.441,16.049,-33.350)
C2: (-0.866,12.469,-33.553)
C6: (-3.331,12.513,-33.406)
C5: (-3.172,13.912,-33.431)
C4: (-1.891,14.455,-33.495)
P: (-5.234,20.025,-34.497)
C4': (-1.401,18.989,-34.446)
C2': (-0.464,16.866,-34.971)
O2': (0.898,17.302,-34.983)
N1: (-2.092,11.839,-33.473)
N2: (0.204,11.678,-33.679)
N3: (-0.715,13.814,-33.552)
N7: (-4.132,14.902,-33.337)
N9: (-2.074,15.855,-33.444)
O5': (-3.819,19.260,-34.542)
O3': (-0.694,18.520,-36.703)
C4: (-5.740,8.666,-32.491)
N3: (-4.583,9.159,-32.940)
OP1: (-5.160,1.215,-31.508)
OP2: (-6.455,3.389,-31.107)
C2: (-3.452,8.501,-33.277)
C1': (-2.340,6.409,-33.688)
C3': (-1.682,4.921,-31.969)
O5': (-4.261,3.475,-32.178)
O4': (-2.706,5.094,-34.092)
C5': (-3.198,3.000,-32.967)
P: (-5.607,2.595,-31.971)
C4': (-2.142,4.129,-33.171)
C2': (-1.256,6.258,-32.619)
O2': (0.015,6.168,-33.316)
N1: (-3.528,7.121,-33.212)
O4: (-6.684,9.440,-32.264)
O2: (-2.408,9.089,-33.597)
C6: (-4.655,6.510,-32.740)
C5: (-5.762,7.199,-32.377)
O3': (-0.651,4.222,-31.274)
N3: (-4.583,9.159,-32.940)
OP1: (-5.160,1.215,-31.508)
OP2: (-6.455,3.389,-31.107)
C2: (-3.452,8.501,-33.277)
C1': (-2.340,6.409,-33.688)
C3': (-1.682,4.921,-31.969)
O5': (-4.261,3.475,-32.178)
O4': (-2.706,5.094,-34.092)
C5': (-3.198,3.000,-32.967)
P: (-5.607,2.595,-31.971)
C4': (-2.142,4.129,-33.171)
C2': (-1.256,6.258,-32.619)
O2': (0.015,6.168,-33.316)
N1: (-3.528,7.121,-33.212)
O4: (-6.684,9.440,-32.264)
O2: (-2.408,9.089,-33.597)
C6: (-4.655,6.510,-32.740)
C5: (-5.762,7.199,-32.377)
O3': (-0.651,4.222,-31.274)
Image (generated by PyMOL):