Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B17:B64
Extra
PDB:
ATOM 1 O3' C A 16 -163.513 -54.170 11.131 1.00 12.12 O
ATOM 2 P G A 17 -164.981 -53.780 10.581 1.00 27.87 P
ATOM 3 OP1 G A 17 -165.162 -52.322 10.826 1.00 27.87 O
ATOM 4 OP2 G A 17 -165.940 -54.724 11.190 1.00 27.87 O
ATOM 5 O5' G A 17 -164.870 -54.063 9.010 1.00 27.87 O
ATOM 6 C5' G A 17 -164.454 -53.048 8.102 1.00 27.87 C
ATOM 7 C4' G A 17 -164.591 -53.493 6.663 1.00 27.87 C
ATOM 8 O4' G A 17 -164.100 -54.853 6.503 1.00 27.87 O
ATOM 9 C3' G A 17 -166.006 -53.565 6.136 1.00 27.87 C
ATOM 10 O3' G A 17 -166.519 -52.311 5.779 1.00 27.87 O
ATOM 11 C2' G A 17 -165.892 -54.543 4.980 1.00 27.87 C
ATOM 12 O2' G A 17 -165.324 -53.917 3.840 1.00 27.87 O
ATOM 13 C1' G A 17 -164.890 -55.543 5.549 1.00 27.87 C
ATOM 14 N9 G A 17 -165.565 -56.655 6.229 1.00 26.96 N
ATOM 15 C8 G A 17 -165.601 -56.884 7.578 1.00 26.96 C
ATOM 16 N7 G A 17 -166.287 -57.942 7.895 1.00 26.96 N
ATOM 17 C5 G A 17 -166.733 -58.434 6.672 1.00 26.96 C
ATOM 18 C6 G A 17 -167.521 -59.573 6.370 1.00 26.96 C
ATOM 19 O6 G A 17 -168.013 -60.414 7.128 1.00 26.96 O
ATOM 20 N1 G A 17 -167.722 -59.697 5.023 1.00 26.96 N
ATOM 21 C2 G A 17 -167.235 -58.845 4.079 1.00 26.96 C
ATOM 22 N2 G A 17 -167.558 -59.153 2.813 1.00 26.96 N
ATOM 23 N3 G A 17 -166.498 -57.780 4.335 1.00 26.96 N
ATOM 24 C4 G A 17 -166.289 -57.643 5.643 1.00 26.96 C
ATOM 25 P C A 18 -167.835 -51.780 6.512 1.00 25.07 P
ATOM 26 OP1 C A 18 -167.765 -50.285 6.508 1.00 25.07 O
ATOM 27 OP2 C A 18 -167.920 -52.488 7.829 1.00 25.07 O
ATOM 28 O5' C A 18 -168.989 -52.300 5.536 1.00 25.07 O
TER
ATOM 1 O3' G B 63 -174.659 -67.349 4.575 1.00 10.82 O
ATOM 2 P U B 64 -173.307 -67.962 3.980 1.00 12.32 P
ATOM 3 OP1 U B 64 -173.707 -68.951 2.955 1.00 12.32 O
ATOM 4 OP2 U B 64 -172.485 -68.429 5.119 1.00 12.32 O
ATOM 5 O5' U B 64 -172.622 -66.690 3.294 1.00 12.32 O
ATOM 6 C5' U B 64 -173.018 -66.267 1.999 1.00 12.32 C
ATOM 7 C4' U B 64 -172.286 -65.026 1.558 1.00 12.32 C
ATOM 8 O4' U B 64 -172.482 -63.979 2.533 1.00 12.32 O
ATOM 9 C3' U B 64 -170.774 -65.152 1.405 1.00 12.32 C
ATOM 10 O3' U B 64 -170.393 -65.626 0.116 1.00 12.32 O
ATOM 11 C2' U B 64 -170.270 -63.741 1.713 1.00 12.32 C
ATOM 12 O2' U B 64 -170.307 -62.903 0.565 1.00 12.32 O
ATOM 13 C1' U B 64 -171.302 -63.247 2.717 1.00 12.32 C
ATOM 14 N1 U B 64 -170.875 -63.457 4.097 1.00 11.57 N
ATOM 15 C2 U B 64 -170.036 -62.517 4.701 1.00 11.57 C
ATOM 16 O2 U B 64 -169.574 -61.517 4.137 1.00 11.57 O
ATOM 17 N3 U B 64 -169.751 -62.810 6.008 1.00 11.57 N
ATOM 18 C4 U B 64 -170.221 -63.896 6.716 1.00 11.57 C
ATOM 19 O4 U B 64 -169.863 -64.012 7.895 1.00 11.57 O
ATOM 20 C5 U B 64 -171.090 -64.801 6.009 1.00 11.57 C
ATOM 21 C6 U B 64 -171.385 -64.552 4.744 1.00 11.57 C
ATOM 22 P A B 65 -169.402 -66.893 -0.037 1.00 26.33 P
ATOM 23 OP1 A B 65 -169.953 -67.754 -1.139 1.00 26.33 O
ATOM 24 OP2 A B 65 -169.241 -67.493 1.323 1.00 26.33 O
ATOM 25 O5' A B 65 -168.023 -66.202 -0.504 1.00 26.33 O
TER
ATOM 2 P G A 17 -164.981 -53.780 10.581 1.00 27.87 P
ATOM 3 OP1 G A 17 -165.162 -52.322 10.826 1.00 27.87 O
ATOM 4 OP2 G A 17 -165.940 -54.724 11.190 1.00 27.87 O
ATOM 5 O5' G A 17 -164.870 -54.063 9.010 1.00 27.87 O
ATOM 6 C5' G A 17 -164.454 -53.048 8.102 1.00 27.87 C
ATOM 7 C4' G A 17 -164.591 -53.493 6.663 1.00 27.87 C
ATOM 8 O4' G A 17 -164.100 -54.853 6.503 1.00 27.87 O
ATOM 9 C3' G A 17 -166.006 -53.565 6.136 1.00 27.87 C
ATOM 10 O3' G A 17 -166.519 -52.311 5.779 1.00 27.87 O
ATOM 11 C2' G A 17 -165.892 -54.543 4.980 1.00 27.87 C
ATOM 12 O2' G A 17 -165.324 -53.917 3.840 1.00 27.87 O
ATOM 13 C1' G A 17 -164.890 -55.543 5.549 1.00 27.87 C
ATOM 14 N9 G A 17 -165.565 -56.655 6.229 1.00 26.96 N
ATOM 15 C8 G A 17 -165.601 -56.884 7.578 1.00 26.96 C
ATOM 16 N7 G A 17 -166.287 -57.942 7.895 1.00 26.96 N
ATOM 17 C5 G A 17 -166.733 -58.434 6.672 1.00 26.96 C
ATOM 18 C6 G A 17 -167.521 -59.573 6.370 1.00 26.96 C
ATOM 19 O6 G A 17 -168.013 -60.414 7.128 1.00 26.96 O
ATOM 20 N1 G A 17 -167.722 -59.697 5.023 1.00 26.96 N
ATOM 21 C2 G A 17 -167.235 -58.845 4.079 1.00 26.96 C
ATOM 22 N2 G A 17 -167.558 -59.153 2.813 1.00 26.96 N
ATOM 23 N3 G A 17 -166.498 -57.780 4.335 1.00 26.96 N
ATOM 24 C4 G A 17 -166.289 -57.643 5.643 1.00 26.96 C
ATOM 25 P C A 18 -167.835 -51.780 6.512 1.00 25.07 P
ATOM 26 OP1 C A 18 -167.765 -50.285 6.508 1.00 25.07 O
ATOM 27 OP2 C A 18 -167.920 -52.488 7.829 1.00 25.07 O
ATOM 28 O5' C A 18 -168.989 -52.300 5.536 1.00 25.07 O
TER
ATOM 1 O3' G B 63 -174.659 -67.349 4.575 1.00 10.82 O
ATOM 2 P U B 64 -173.307 -67.962 3.980 1.00 12.32 P
ATOM 3 OP1 U B 64 -173.707 -68.951 2.955 1.00 12.32 O
ATOM 4 OP2 U B 64 -172.485 -68.429 5.119 1.00 12.32 O
ATOM 5 O5' U B 64 -172.622 -66.690 3.294 1.00 12.32 O
ATOM 6 C5' U B 64 -173.018 -66.267 1.999 1.00 12.32 C
ATOM 7 C4' U B 64 -172.286 -65.026 1.558 1.00 12.32 C
ATOM 8 O4' U B 64 -172.482 -63.979 2.533 1.00 12.32 O
ATOM 9 C3' U B 64 -170.774 -65.152 1.405 1.00 12.32 C
ATOM 10 O3' U B 64 -170.393 -65.626 0.116 1.00 12.32 O
ATOM 11 C2' U B 64 -170.270 -63.741 1.713 1.00 12.32 C
ATOM 12 O2' U B 64 -170.307 -62.903 0.565 1.00 12.32 O
ATOM 13 C1' U B 64 -171.302 -63.247 2.717 1.00 12.32 C
ATOM 14 N1 U B 64 -170.875 -63.457 4.097 1.00 11.57 N
ATOM 15 C2 U B 64 -170.036 -62.517 4.701 1.00 11.57 C
ATOM 16 O2 U B 64 -169.574 -61.517 4.137 1.00 11.57 O
ATOM 17 N3 U B 64 -169.751 -62.810 6.008 1.00 11.57 N
ATOM 18 C4 U B 64 -170.221 -63.896 6.716 1.00 11.57 C
ATOM 19 O4 U B 64 -169.863 -64.012 7.895 1.00 11.57 O
ATOM 20 C5 U B 64 -171.090 -64.801 6.009 1.00 11.57 C
ATOM 21 C6 U B 64 -171.385 -64.552 4.744 1.00 11.57 C
ATOM 22 P A B 65 -169.402 -66.893 -0.037 1.00 26.33 P
ATOM 23 OP1 A B 65 -169.953 -67.754 -1.139 1.00 26.33 O
ATOM 24 OP2 A B 65 -169.241 -67.493 1.323 1.00 26.33 O
ATOM 25 O5' A B 65 -168.023 -66.202 -0.504 1.00 26.33 O
TER
Atoms:
OP1: (-165.162,-52.322,10.826)
OP2: (-165.940,-54.724,11.190)
C3': (-166.006,-53.565,6.136)
C1': (-164.890,-55.543,5.549)
C5': (-164.454,-53.048,8.102)
O6: (-168.013,-60.414,7.128)
O4': (-164.100,-54.853,6.503)
C8: (-165.601,-56.884,7.578)
C2: (-167.235,-58.845,4.079)
C6: (-167.521,-59.573,6.370)
C5: (-166.733,-58.434,6.672)
C4: (-166.289,-57.643,5.643)
P: (-164.981,-53.780,10.581)
C4': (-164.591,-53.493,6.663)
C2': (-165.892,-54.543,4.980)
O2': (-165.324,-53.917,3.840)
N1: (-167.722,-59.697,5.023)
N2: (-167.558,-59.153,2.813)
N3: (-166.498,-57.780,4.335)
N7: (-166.287,-57.942,7.895)
N9: (-165.565,-56.655,6.229)
O5': (-164.870,-54.063,9.010)
O3': (-166.519,-52.311,5.779)
OP2: (-165.940,-54.724,11.190)
C3': (-166.006,-53.565,6.136)
C1': (-164.890,-55.543,5.549)
C5': (-164.454,-53.048,8.102)
O6: (-168.013,-60.414,7.128)
O4': (-164.100,-54.853,6.503)
C8: (-165.601,-56.884,7.578)
C2: (-167.235,-58.845,4.079)
C6: (-167.521,-59.573,6.370)
C5: (-166.733,-58.434,6.672)
C4: (-166.289,-57.643,5.643)
P: (-164.981,-53.780,10.581)
C4': (-164.591,-53.493,6.663)
C2': (-165.892,-54.543,4.980)
O2': (-165.324,-53.917,3.840)
N1: (-167.722,-59.697,5.023)
N2: (-167.558,-59.153,2.813)
N3: (-166.498,-57.780,4.335)
N7: (-166.287,-57.942,7.895)
N9: (-165.565,-56.655,6.229)
O5': (-164.870,-54.063,9.010)
O3': (-166.519,-52.311,5.779)
C4: (-170.221,-63.896,6.716)
N3: (-169.751,-62.810,6.008)
OP1: (-173.707,-68.951,2.955)
OP2: (-172.485,-68.429,5.119)
C2: (-170.036,-62.517,4.701)
C1': (-171.302,-63.247,2.717)
C3': (-170.774,-65.152,1.405)
O5': (-172.622,-66.690,3.294)
O4': (-172.482,-63.979,2.533)
C5': (-173.018,-66.267,1.999)
P: (-173.307,-67.962,3.980)
C4': (-172.286,-65.026,1.558)
C2': (-170.270,-63.741,1.713)
O2': (-170.307,-62.903,0.565)
N1: (-170.875,-63.457,4.097)
O4: (-169.863,-64.012,7.895)
O2: (-169.574,-61.517,4.137)
C6: (-171.385,-64.552,4.744)
C5: (-171.090,-64.801,6.009)
O3': (-170.393,-65.626,0.116)
N3: (-169.751,-62.810,6.008)
OP1: (-173.707,-68.951,2.955)
OP2: (-172.485,-68.429,5.119)
C2: (-170.036,-62.517,4.701)
C1': (-171.302,-63.247,2.717)
C3': (-170.774,-65.152,1.405)
O5': (-172.622,-66.690,3.294)
O4': (-172.482,-63.979,2.533)
C5': (-173.018,-66.267,1.999)
P: (-173.307,-67.962,3.980)
C4': (-172.286,-65.026,1.558)
C2': (-170.270,-63.741,1.713)
O2': (-170.307,-62.903,0.565)
N1: (-170.875,-63.457,4.097)
O4: (-169.863,-64.012,7.895)
O2: (-169.574,-61.517,4.137)
C6: (-171.385,-64.552,4.744)
C5: (-171.090,-64.801,6.009)
O3': (-170.393,-65.626,0.116)
Image (generated by PyMOL):