Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1113:A1028
Extra
PDB:
ATOM 1 O3' U A1112 -123.830 -84.303 -22.527 1.00 3.83 O
ATOM 2 P G A1113 -122.316 -83.887 -22.648 1.00 0.01 P
ATOM 3 OP1 G A1113 -121.803 -83.818 -21.273 1.00 0.01 O
ATOM 4 OP2 G A1113 -122.253 -82.687 -23.534 1.00 0.01 O
ATOM 5 O5' G A1113 -121.694 -85.124 -23.379 1.00 0.01 O
ATOM 6 C5' G A1113 -121.830 -86.391 -22.804 1.00 0.01 C
ATOM 7 C4' G A1113 -121.099 -87.402 -23.593 1.00 0.01 C
ATOM 8 O4' G A1113 -121.753 -87.579 -24.868 1.00 0.01 O
ATOM 9 C3' G A1113 -119.685 -87.046 -23.988 1.00 0.01 C
ATOM 10 O3' G A1113 -118.766 -87.134 -22.915 1.00 0.01 O
ATOM 11 C2' G A1113 -119.455 -88.059 -25.083 1.00 0.01 C
ATOM 12 O2' G A1113 -119.349 -89.358 -24.521 1.00 0.01 O
ATOM 13 C1' G A1113 -120.792 -87.977 -25.816 1.00 0.01 C
ATOM 14 N9 G A1113 -120.763 -86.988 -26.892 1.00 0.01 N
ATOM 15 C8 G A1113 -121.324 -85.746 -26.924 1.00 0.01 C
ATOM 16 N7 G A1113 -121.078 -85.130 -28.047 1.00 0.01 N
ATOM 17 C5 G A1113 -120.318 -86.031 -28.770 1.00 0.01 C
ATOM 18 C6 G A1113 -119.753 -85.948 -30.054 1.00 0.01 C
ATOM 19 O6 G A1113 -119.804 -85.015 -30.865 1.00 0.01 O
ATOM 20 N1 G A1113 -119.070 -87.101 -30.397 1.00 0.01 N
ATOM 21 C2 G A1113 -118.942 -88.192 -29.609 1.00 0.01 C
ATOM 22 N2 G A1113 -118.235 -89.200 -30.119 1.00 0.01 N
ATOM 23 N3 G A1113 -119.460 -88.281 -28.409 1.00 0.01 N
ATOM 24 C4 G A1113 -120.124 -87.172 -28.068 1.00 0.01 C
ATOM 25 P C A1114 -117.581 -86.053 -22.750 1.00 0.01 P
ATOM 26 OP1 C A1114 -117.014 -86.252 -21.413 1.00 0.01 O
ATOM 27 OP2 C A1114 -118.121 -84.719 -23.102 1.00 0.01 O
ATOM 28 O5' C A1114 -116.547 -86.509 -23.850 1.00 0.01 O
TER
ATOM 1 O3' G B1027 -116.058 -84.661 -39.711 1.00 0.12 O
ATOM 2 P U B1028 -117.548 -85.124 -40.066 1.00 0.01 P
ATOM 3 OP1 U B1028 -117.491 -85.796 -41.394 1.00 0.01 O
ATOM 4 OP2 U B1028 -118.441 -83.941 -39.892 1.00 0.01 O
ATOM 5 O5' U B1028 -117.837 -86.187 -38.917 1.00 0.01 O
ATOM 6 C5' U B1028 -117.062 -87.367 -38.809 1.00 0.01 C
ATOM 7 C4' U B1028 -116.992 -87.860 -37.393 1.00 0.01 C
ATOM 8 O4' U B1028 -116.516 -86.814 -36.524 1.00 0.01 O
ATOM 9 C3' U B1028 -118.289 -88.253 -36.755 1.00 0.01 C
ATOM 10 O3' U B1028 -118.769 -89.487 -37.212 1.00 0.01 O
ATOM 11 C2' U B1028 -117.912 -88.251 -35.291 1.00 0.01 C
ATOM 12 O2' U B1028 -117.138 -89.381 -34.979 1.00 0.01 O
ATOM 13 C1' U B1028 -117.018 -87.022 -35.230 1.00 0.01 C
ATOM 14 N1 U B1028 -117.776 -85.878 -34.873 1.00 0.01 N
ATOM 15 C2 U B1028 -118.039 -85.626 -33.574 1.00 0.01 C
ATOM 16 O2 U B1028 -117.601 -86.279 -32.666 1.00 0.01 O
ATOM 17 N3 U B1028 -118.824 -84.552 -33.393 1.00 0.01 N
ATOM 18 C4 U B1028 -119.347 -83.767 -34.363 1.00 0.01 C
ATOM 19 O4 U B1028 -120.045 -82.816 -34.080 1.00 0.01 O
ATOM 20 C5 U B1028 -119.031 -84.129 -35.676 1.00 0.01 C
ATOM 21 C6 U B1028 -118.269 -85.171 -35.888 1.00 0.01 C
ATOM 22 P G B1029 -120.356 -89.772 -37.261 1.00 7.27 P
ATOM 23 OP1 G B1029 -120.551 -90.892 -38.233 1.00 7.27 O
ATOM 24 OP2 G B1029 -121.044 -88.474 -37.511 1.00 7.27 O
ATOM 25 O5' G B1029 -120.677 -90.263 -35.787 1.00 7.27 O
TER
ATOM 2 P G A1113 -122.316 -83.887 -22.648 1.00 0.01 P
ATOM 3 OP1 G A1113 -121.803 -83.818 -21.273 1.00 0.01 O
ATOM 4 OP2 G A1113 -122.253 -82.687 -23.534 1.00 0.01 O
ATOM 5 O5' G A1113 -121.694 -85.124 -23.379 1.00 0.01 O
ATOM 6 C5' G A1113 -121.830 -86.391 -22.804 1.00 0.01 C
ATOM 7 C4' G A1113 -121.099 -87.402 -23.593 1.00 0.01 C
ATOM 8 O4' G A1113 -121.753 -87.579 -24.868 1.00 0.01 O
ATOM 9 C3' G A1113 -119.685 -87.046 -23.988 1.00 0.01 C
ATOM 10 O3' G A1113 -118.766 -87.134 -22.915 1.00 0.01 O
ATOM 11 C2' G A1113 -119.455 -88.059 -25.083 1.00 0.01 C
ATOM 12 O2' G A1113 -119.349 -89.358 -24.521 1.00 0.01 O
ATOM 13 C1' G A1113 -120.792 -87.977 -25.816 1.00 0.01 C
ATOM 14 N9 G A1113 -120.763 -86.988 -26.892 1.00 0.01 N
ATOM 15 C8 G A1113 -121.324 -85.746 -26.924 1.00 0.01 C
ATOM 16 N7 G A1113 -121.078 -85.130 -28.047 1.00 0.01 N
ATOM 17 C5 G A1113 -120.318 -86.031 -28.770 1.00 0.01 C
ATOM 18 C6 G A1113 -119.753 -85.948 -30.054 1.00 0.01 C
ATOM 19 O6 G A1113 -119.804 -85.015 -30.865 1.00 0.01 O
ATOM 20 N1 G A1113 -119.070 -87.101 -30.397 1.00 0.01 N
ATOM 21 C2 G A1113 -118.942 -88.192 -29.609 1.00 0.01 C
ATOM 22 N2 G A1113 -118.235 -89.200 -30.119 1.00 0.01 N
ATOM 23 N3 G A1113 -119.460 -88.281 -28.409 1.00 0.01 N
ATOM 24 C4 G A1113 -120.124 -87.172 -28.068 1.00 0.01 C
ATOM 25 P C A1114 -117.581 -86.053 -22.750 1.00 0.01 P
ATOM 26 OP1 C A1114 -117.014 -86.252 -21.413 1.00 0.01 O
ATOM 27 OP2 C A1114 -118.121 -84.719 -23.102 1.00 0.01 O
ATOM 28 O5' C A1114 -116.547 -86.509 -23.850 1.00 0.01 O
TER
ATOM 1 O3' G B1027 -116.058 -84.661 -39.711 1.00 0.12 O
ATOM 2 P U B1028 -117.548 -85.124 -40.066 1.00 0.01 P
ATOM 3 OP1 U B1028 -117.491 -85.796 -41.394 1.00 0.01 O
ATOM 4 OP2 U B1028 -118.441 -83.941 -39.892 1.00 0.01 O
ATOM 5 O5' U B1028 -117.837 -86.187 -38.917 1.00 0.01 O
ATOM 6 C5' U B1028 -117.062 -87.367 -38.809 1.00 0.01 C
ATOM 7 C4' U B1028 -116.992 -87.860 -37.393 1.00 0.01 C
ATOM 8 O4' U B1028 -116.516 -86.814 -36.524 1.00 0.01 O
ATOM 9 C3' U B1028 -118.289 -88.253 -36.755 1.00 0.01 C
ATOM 10 O3' U B1028 -118.769 -89.487 -37.212 1.00 0.01 O
ATOM 11 C2' U B1028 -117.912 -88.251 -35.291 1.00 0.01 C
ATOM 12 O2' U B1028 -117.138 -89.381 -34.979 1.00 0.01 O
ATOM 13 C1' U B1028 -117.018 -87.022 -35.230 1.00 0.01 C
ATOM 14 N1 U B1028 -117.776 -85.878 -34.873 1.00 0.01 N
ATOM 15 C2 U B1028 -118.039 -85.626 -33.574 1.00 0.01 C
ATOM 16 O2 U B1028 -117.601 -86.279 -32.666 1.00 0.01 O
ATOM 17 N3 U B1028 -118.824 -84.552 -33.393 1.00 0.01 N
ATOM 18 C4 U B1028 -119.347 -83.767 -34.363 1.00 0.01 C
ATOM 19 O4 U B1028 -120.045 -82.816 -34.080 1.00 0.01 O
ATOM 20 C5 U B1028 -119.031 -84.129 -35.676 1.00 0.01 C
ATOM 21 C6 U B1028 -118.269 -85.171 -35.888 1.00 0.01 C
ATOM 22 P G B1029 -120.356 -89.772 -37.261 1.00 7.27 P
ATOM 23 OP1 G B1029 -120.551 -90.892 -38.233 1.00 7.27 O
ATOM 24 OP2 G B1029 -121.044 -88.474 -37.511 1.00 7.27 O
ATOM 25 O5' G B1029 -120.677 -90.263 -35.787 1.00 7.27 O
TER
Atoms:
OP1: (-121.803,-83.818,-21.273)
OP2: (-122.253,-82.687,-23.534)
C3': (-119.685,-87.046,-23.988)
C1': (-120.792,-87.977,-25.816)
C5': (-121.830,-86.391,-22.804)
O6: (-119.804,-85.015,-30.865)
O4': (-121.753,-87.579,-24.868)
C8: (-121.324,-85.746,-26.924)
C2: (-118.942,-88.192,-29.609)
C6: (-119.753,-85.948,-30.054)
C5: (-120.318,-86.031,-28.770)
C4: (-120.124,-87.172,-28.068)
P: (-122.316,-83.887,-22.648)
C4': (-121.099,-87.402,-23.593)
C2': (-119.455,-88.059,-25.083)
O2': (-119.349,-89.358,-24.521)
N1: (-119.070,-87.101,-30.397)
N2: (-118.235,-89.200,-30.119)
N3: (-119.460,-88.281,-28.409)
N7: (-121.078,-85.130,-28.047)
N9: (-120.763,-86.988,-26.892)
O5': (-121.694,-85.124,-23.379)
O3': (-118.766,-87.134,-22.915)
OP2: (-122.253,-82.687,-23.534)
C3': (-119.685,-87.046,-23.988)
C1': (-120.792,-87.977,-25.816)
C5': (-121.830,-86.391,-22.804)
O6: (-119.804,-85.015,-30.865)
O4': (-121.753,-87.579,-24.868)
C8: (-121.324,-85.746,-26.924)
C2: (-118.942,-88.192,-29.609)
C6: (-119.753,-85.948,-30.054)
C5: (-120.318,-86.031,-28.770)
C4: (-120.124,-87.172,-28.068)
P: (-122.316,-83.887,-22.648)
C4': (-121.099,-87.402,-23.593)
C2': (-119.455,-88.059,-25.083)
O2': (-119.349,-89.358,-24.521)
N1: (-119.070,-87.101,-30.397)
N2: (-118.235,-89.200,-30.119)
N3: (-119.460,-88.281,-28.409)
N7: (-121.078,-85.130,-28.047)
N9: (-120.763,-86.988,-26.892)
O5': (-121.694,-85.124,-23.379)
O3': (-118.766,-87.134,-22.915)
C4: (-119.347,-83.767,-34.363)
N3: (-118.824,-84.552,-33.393)
OP1: (-117.491,-85.796,-41.394)
OP2: (-118.441,-83.941,-39.892)
C2: (-118.039,-85.626,-33.574)
C1': (-117.018,-87.022,-35.230)
C3': (-118.289,-88.253,-36.755)
O5': (-117.837,-86.187,-38.917)
O4': (-116.516,-86.814,-36.524)
C5': (-117.062,-87.367,-38.809)
P: (-117.548,-85.124,-40.066)
C4': (-116.992,-87.860,-37.393)
C2': (-117.912,-88.251,-35.291)
O2': (-117.138,-89.381,-34.979)
N1: (-117.776,-85.878,-34.873)
O4: (-120.045,-82.816,-34.080)
O2: (-117.601,-86.279,-32.666)
C6: (-118.269,-85.171,-35.888)
C5: (-119.031,-84.129,-35.676)
O3': (-118.769,-89.487,-37.212)
N3: (-118.824,-84.552,-33.393)
OP1: (-117.491,-85.796,-41.394)
OP2: (-118.441,-83.941,-39.892)
C2: (-118.039,-85.626,-33.574)
C1': (-117.018,-87.022,-35.230)
C3': (-118.289,-88.253,-36.755)
O5': (-117.837,-86.187,-38.917)
O4': (-116.516,-86.814,-36.524)
C5': (-117.062,-87.367,-38.809)
P: (-117.548,-85.124,-40.066)
C4': (-116.992,-87.860,-37.393)
C2': (-117.912,-88.251,-35.291)
O2': (-117.138,-89.381,-34.979)
N1: (-117.776,-85.878,-34.873)
O4: (-120.045,-82.816,-34.080)
O2: (-117.601,-86.279,-32.666)
C6: (-118.269,-85.171,-35.888)
C5: (-119.031,-84.129,-35.676)
O3': (-118.769,-89.487,-37.212)
Image (generated by PyMOL):