ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:6889:6911

Extra

PDB:
ATOM 1 O3' U A 888 215.961 -38.270 185.508 1.00 80.52 O
ATOM 2 P G A 889 214.922 -39.430 185.830 1.00 86.25 P
ATOM 3 OP1 G A 889 214.591 -40.089 184.544 1.00 87.28 O
ATOM 4 OP2 G A 889 213.824 -38.833 186.626 1.00 85.42 O
ATOM 5 O5' G A 889 215.790 -40.402 186.737 1.00 86.48 O
ATOM 6 C5' G A 889 216.864 -41.130 186.170 1.00 87.31 C
ATOM 7 C4' G A 889 218.013 -41.283 187.129 1.00 87.07 C
ATOM 8 O4' G A 889 218.459 -39.991 187.585 1.00 86.08 O
ATOM 9 C3' G A 889 217.725 -42.038 188.405 1.00 86.93 C
ATOM 10 O3' G A 889 217.721 -43.434 188.207 1.00 87.94 O
ATOM 11 C2' G A 889 218.852 -41.571 189.311 1.00 86.35 C
ATOM 12 O2' G A 889 220.051 -42.292 189.023 1.00 87.10 O
ATOM 13 C1' G A 889 219.032 -40.116 188.860 1.00 85.64 C
ATOM 14 N9 G A 889 218.374 -39.159 189.759 1.00 84.55 N
ATOM 15 C8 G A 889 217.170 -38.539 189.551 1.00 84.14 C
ATOM 16 N7 G A 889 216.831 -37.714 190.506 1.00 83.19 N
ATOM 17 C5 G A 889 217.898 -37.791 191.397 1.00 82.95 C
ATOM 18 C6 G A 889 218.115 -37.132 192.631 1.00 82.06 C
ATOM 19 O6 G A 889 217.384 -36.328 193.205 1.00 81.28 O
ATOM 20 N1 G A 889 219.310 -37.475 193.224 1.00 82.16 N
ATOM 21 C2 G A 889 220.199 -38.363 192.703 1.00 83.03 C
ATOM 22 N2 G A 889 221.301 -38.555 193.441 1.00 83.00 N
ATOM 23 N3 G A 889 220.026 -38.994 191.550 1.00 83.88 N
ATOM 24 C4 G A 889 218.858 -38.671 190.951 1.00 83.79 C
ATOM 25 P U A 890 216.594 -44.343 188.880 1.00 98.95 P
ATOM 26 OP1 U A 890 216.571 -45.628 188.134 1.00100.16 O
ATOM 27 OP2 U A 890 215.360 -43.532 188.945 1.00 98.28 O
ATOM 28 O5' U A 890 217.156 -44.577 190.348 1.00 98.53 O
TER

ATOM 1 O3' U B 910 221.826 -31.840 201.270 1.00 91.70 O
ATOM 2 P U B 911 222.395 -31.123 199.959 1.00 79.85 P
ATOM 3 OP1 U B 911 223.422 -30.140 200.410 1.00 79.31 O
ATOM 4 OP2 U B 911 221.226 -30.632 199.186 1.00 79.68 O
ATOM 5 O5' U B 911 223.092 -32.331 199.185 1.00 80.88 O
ATOM 6 C5' U B 911 224.095 -33.108 199.820 1.00 81.28 C
ATOM 7 C4' U B 911 224.455 -34.322 199.009 1.00 82.32 C
ATOM 8 O4' U B 911 223.381 -35.291 199.057 1.00 82.72 O
ATOM 9 C3' U B 911 224.645 -34.096 197.535 1.00 82.72 C
ATOM 10 O3' U B 911 225.878 -33.530 197.217 1.00 82.71 O
ATOM 11 C2' U B 911 224.446 -35.482 196.959 1.00 83.71 C
ATOM 12 O2' U B 911 225.581 -36.289 197.196 1.00 84.33 O
ATOM 13 C1' U B 911 223.309 -35.984 197.825 1.00 83.53 C
ATOM 14 N1 U B 911 222.018 -35.689 197.200 1.00 83.38 N
ATOM 15 C2 U B 911 221.533 -36.613 196.286 1.00 84.20 C
ATOM 16 O2 U B 911 222.104 -37.662 196.014 1.00 85.02 O
ATOM 17 N3 U B 911 220.338 -36.289 195.706 1.00 84.06 N
ATOM 18 C4 U B 911 219.614 -35.150 195.946 1.00 83.20 C
ATOM 19 O4 U B 911 218.568 -34.994 195.343 1.00 83.22 O
ATOM 20 C5 U B 911 220.191 -34.229 196.880 1.00 82.39 C
ATOM 21 C6 U B 911 221.351 -34.518 197.469 1.00 82.50 C
ATOM 22 P U B 912 225.964 -32.561 195.965 1.00 74.73 P
ATOM 23 OP1 U B 912 227.401 -32.228 195.774 1.00 74.90 O
ATOM 24 OP2 U B 912 224.994 -31.466 196.211 1.00 73.84 O
ATOM 25 O5' U B 912 225.441 -33.470 194.758 1.00 75.62 O
TER

Atoms:
OP1: (214.591,-40.089,184.544)
OP2: (213.824,-38.833,186.626)
C3': (217.725,-42.038,188.405)
C1': (219.032,-40.116,188.860)
C5': (216.864,-41.130,186.170)
O6: (217.384,-36.328,193.205)
O4': (218.459,-39.991,187.585)
C8: (217.170,-38.539,189.551)
C2: (220.199,-38.363,192.703)
C6: (218.115,-37.132,192.631)
C5: (217.898,-37.791,191.397)
C4: (218.858,-38.671,190.951)
P: (214.922,-39.430,185.830)
C4': (218.013,-41.283,187.129)
C2': (218.852,-41.571,189.311)
O2': (220.051,-42.292,189.023)
N1: (219.310,-37.475,193.224)
N2: (221.301,-38.555,193.441)
N3: (220.026,-38.994,191.550)
N7: (216.831,-37.714,190.506)
N9: (218.374,-39.159,189.759)
O5': (215.790,-40.402,186.737)
O3': (217.721,-43.434,188.207)
C4: (219.614,-35.150,195.946)
N3: (220.338,-36.289,195.706)
OP1: (223.422,-30.140,200.410)
OP2: (221.226,-30.632,199.186)
C2: (221.533,-36.613,196.286)
C1': (223.309,-35.984,197.825)
C3': (224.645,-34.096,197.535)
O5': (223.092,-32.331,199.185)
O4': (223.381,-35.291,199.057)
C5': (224.095,-33.108,199.820)
P: (222.395,-31.123,199.959)
C4': (224.455,-34.322,199.009)
C2': (224.446,-35.482,196.959)
O2': (225.581,-36.289,197.196)
N1: (222.018,-35.689,197.200)
O4: (218.568,-34.994,195.343)
O2: (222.104,-37.662,196.014)
C6: (221.351,-34.518,197.469)
C5: (220.191,-34.229,196.880)
O3': (225.878,-33.530,197.217)
Image (generated by PyMOL):
PyMOL image
show in jmol