Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0739:0641
Extra
PDB:
ATOM 1 O3' U A 738 33.819 101.840 48.608 1.00 48.21 O
ATOM 2 P G A 739 35.000 102.210 49.620 1.00 48.24 P
ATOM 3 OP1 G A 739 35.184 103.686 49.521 1.00 48.80 O
ATOM 4 OP2 G A 739 36.151 101.292 49.375 1.00 44.64 O
ATOM 5 O5' G A 739 34.386 101.852 51.039 1.00 45.36 O
ATOM 6 C5' G A 739 33.199 102.496 51.479 1.00 43.33 C
ATOM 7 C4' G A 739 32.584 101.724 52.606 1.00 43.26 C
ATOM 8 O4' G A 739 32.350 100.363 52.167 1.00 40.43 O
ATOM 9 C3' G A 739 33.441 101.504 53.837 1.00 43.32 C
ATOM 10 O3' G A 739 33.571 102.647 54.660 1.00 45.76 O
ATOM 11 C2' G A 739 32.685 100.371 54.509 1.00 41.80 C
ATOM 12 O2' G A 739 31.483 100.782 55.142 1.00 39.75 O
ATOM 13 C1' G A 739 32.364 99.505 53.293 1.00 38.69 C
ATOM 14 N9 G A 739 33.396 98.494 53.104 1.00 34.98 N
ATOM 15 C8 G A 739 34.387 98.441 52.154 1.00 33.35 C
ATOM 16 N7 G A 739 35.145 97.384 52.268 1.00 30.67 N
ATOM 17 C5 G A 739 34.621 96.707 53.359 1.00 30.34 C
ATOM 18 C6 G A 739 35.007 95.488 53.952 1.00 30.53 C
ATOM 19 O6 G A 739 35.916 94.729 53.623 1.00 30.46 O
ATOM 20 N1 G A 739 34.197 95.170 55.034 1.00 31.28 N
ATOM 21 C2 G A 739 33.141 95.929 55.483 1.00 32.75 C
ATOM 22 N2 G A 739 32.466 95.460 56.542 1.00 33.90 N
ATOM 23 N3 G A 739 32.771 97.061 54.935 1.00 31.13 N
ATOM 24 C4 G A 739 33.547 97.385 53.884 1.00 32.10 C
ATOM 25 P U A 740 34.989 102.955 55.345 1.00 47.32 P
ATOM 26 OP1 U A 740 34.849 104.268 56.026 1.00 48.51 O
ATOM 27 OP2 U A 740 36.078 102.756 54.341 1.00 44.50 O
ATOM 28 O5' U A 740 35.111 101.826 56.462 1.00 47.24 O
TER
ATOM 1 O3' G B 640 38.594 86.342 57.906 1.00 40.08 O
ATOM 2 P U B 641 37.333 85.932 57.004 1.00 43.27 P
ATOM 3 OP1 U B 641 36.930 84.569 57.477 1.00 40.53 O
ATOM 4 OP2 U B 641 37.724 86.145 55.577 1.00 40.01 O
ATOM 5 O5' U B 641 36.216 87.017 57.356 1.00 39.03 O
ATOM 6 C5' U B 641 35.833 87.272 58.715 1.00 37.34 C
ATOM 7 C4' U B 641 35.212 88.639 58.832 1.00 38.81 C
ATOM 8 O4' U B 641 36.170 89.636 58.418 1.00 39.92 O
ATOM 9 C3' U B 641 34.021 88.909 57.928 1.00 40.58 C
ATOM 10 O3' U B 641 32.818 88.373 58.459 1.00 40.98 O
ATOM 11 C2' U B 641 33.997 90.430 57.855 1.00 39.45 C
ATOM 12 O2' U B 641 33.409 91.060 58.961 1.00 41.32 O
ATOM 13 C1' U B 641 35.490 90.745 57.853 1.00 38.84 C
ATOM 14 N1 U B 641 36.004 90.967 56.502 1.00 38.91 N
ATOM 15 C2 U B 641 35.728 92.180 55.905 1.00 39.45 C
ATOM 16 O2 U B 641 35.053 93.030 56.434 1.00 40.68 O
ATOM 17 N3 U B 641 36.263 92.351 54.666 1.00 38.89 N
ATOM 18 C4 U B 641 37.021 91.447 53.968 1.00 40.56 C
ATOM 19 O4 U B 641 37.474 91.763 52.868 1.00 44.80 O
ATOM 20 C5 U B 641 37.242 90.204 54.638 1.00 40.18 C
ATOM 21 C6 U B 641 36.739 90.013 55.850 1.00 37.67 C
ATOM 22 P A B 642 31.767 87.671 57.480 1.00 39.77 P
ATOM 23 OP1 A B 642 30.928 86.797 58.330 1.00 39.96 O
ATOM 24 OP2 A B 642 32.479 87.090 56.321 1.00 39.66 O
ATOM 25 O5' A B 642 30.887 88.896 56.983 1.00 38.27 O
TER
ATOM 2 P G A 739 35.000 102.210 49.620 1.00 48.24 P
ATOM 3 OP1 G A 739 35.184 103.686 49.521 1.00 48.80 O
ATOM 4 OP2 G A 739 36.151 101.292 49.375 1.00 44.64 O
ATOM 5 O5' G A 739 34.386 101.852 51.039 1.00 45.36 O
ATOM 6 C5' G A 739 33.199 102.496 51.479 1.00 43.33 C
ATOM 7 C4' G A 739 32.584 101.724 52.606 1.00 43.26 C
ATOM 8 O4' G A 739 32.350 100.363 52.167 1.00 40.43 O
ATOM 9 C3' G A 739 33.441 101.504 53.837 1.00 43.32 C
ATOM 10 O3' G A 739 33.571 102.647 54.660 1.00 45.76 O
ATOM 11 C2' G A 739 32.685 100.371 54.509 1.00 41.80 C
ATOM 12 O2' G A 739 31.483 100.782 55.142 1.00 39.75 O
ATOM 13 C1' G A 739 32.364 99.505 53.293 1.00 38.69 C
ATOM 14 N9 G A 739 33.396 98.494 53.104 1.00 34.98 N
ATOM 15 C8 G A 739 34.387 98.441 52.154 1.00 33.35 C
ATOM 16 N7 G A 739 35.145 97.384 52.268 1.00 30.67 N
ATOM 17 C5 G A 739 34.621 96.707 53.359 1.00 30.34 C
ATOM 18 C6 G A 739 35.007 95.488 53.952 1.00 30.53 C
ATOM 19 O6 G A 739 35.916 94.729 53.623 1.00 30.46 O
ATOM 20 N1 G A 739 34.197 95.170 55.034 1.00 31.28 N
ATOM 21 C2 G A 739 33.141 95.929 55.483 1.00 32.75 C
ATOM 22 N2 G A 739 32.466 95.460 56.542 1.00 33.90 N
ATOM 23 N3 G A 739 32.771 97.061 54.935 1.00 31.13 N
ATOM 24 C4 G A 739 33.547 97.385 53.884 1.00 32.10 C
ATOM 25 P U A 740 34.989 102.955 55.345 1.00 47.32 P
ATOM 26 OP1 U A 740 34.849 104.268 56.026 1.00 48.51 O
ATOM 27 OP2 U A 740 36.078 102.756 54.341 1.00 44.50 O
ATOM 28 O5' U A 740 35.111 101.826 56.462 1.00 47.24 O
TER
ATOM 1 O3' G B 640 38.594 86.342 57.906 1.00 40.08 O
ATOM 2 P U B 641 37.333 85.932 57.004 1.00 43.27 P
ATOM 3 OP1 U B 641 36.930 84.569 57.477 1.00 40.53 O
ATOM 4 OP2 U B 641 37.724 86.145 55.577 1.00 40.01 O
ATOM 5 O5' U B 641 36.216 87.017 57.356 1.00 39.03 O
ATOM 6 C5' U B 641 35.833 87.272 58.715 1.00 37.34 C
ATOM 7 C4' U B 641 35.212 88.639 58.832 1.00 38.81 C
ATOM 8 O4' U B 641 36.170 89.636 58.418 1.00 39.92 O
ATOM 9 C3' U B 641 34.021 88.909 57.928 1.00 40.58 C
ATOM 10 O3' U B 641 32.818 88.373 58.459 1.00 40.98 O
ATOM 11 C2' U B 641 33.997 90.430 57.855 1.00 39.45 C
ATOM 12 O2' U B 641 33.409 91.060 58.961 1.00 41.32 O
ATOM 13 C1' U B 641 35.490 90.745 57.853 1.00 38.84 C
ATOM 14 N1 U B 641 36.004 90.967 56.502 1.00 38.91 N
ATOM 15 C2 U B 641 35.728 92.180 55.905 1.00 39.45 C
ATOM 16 O2 U B 641 35.053 93.030 56.434 1.00 40.68 O
ATOM 17 N3 U B 641 36.263 92.351 54.666 1.00 38.89 N
ATOM 18 C4 U B 641 37.021 91.447 53.968 1.00 40.56 C
ATOM 19 O4 U B 641 37.474 91.763 52.868 1.00 44.80 O
ATOM 20 C5 U B 641 37.242 90.204 54.638 1.00 40.18 C
ATOM 21 C6 U B 641 36.739 90.013 55.850 1.00 37.67 C
ATOM 22 P A B 642 31.767 87.671 57.480 1.00 39.77 P
ATOM 23 OP1 A B 642 30.928 86.797 58.330 1.00 39.96 O
ATOM 24 OP2 A B 642 32.479 87.090 56.321 1.00 39.66 O
ATOM 25 O5' A B 642 30.887 88.896 56.983 1.00 38.27 O
TER
Atoms:
OP1: (35.184,103.686,49.521)
OP2: (36.151,101.292,49.375)
C3': (33.441,101.504,53.837)
C1': (32.364,99.505,53.293)
C5': (33.199,102.496,51.479)
O6: (35.916,94.729,53.623)
O4': (32.350,100.363,52.167)
C8: (34.387,98.441,52.154)
C2: (33.141,95.929,55.483)
C6: (35.007,95.488,53.952)
C5: (34.621,96.707,53.359)
C4: (33.547,97.385,53.884)
P: (35.000,102.210,49.620)
C4': (32.584,101.724,52.606)
C2': (32.685,100.371,54.509)
O2': (31.483,100.782,55.142)
N1: (34.197,95.170,55.034)
N2: (32.466,95.460,56.542)
N3: (32.771,97.061,54.935)
N7: (35.145,97.384,52.268)
N9: (33.396,98.494,53.104)
O5': (34.386,101.852,51.039)
O3': (33.571,102.647,54.660)
OP2: (36.151,101.292,49.375)
C3': (33.441,101.504,53.837)
C1': (32.364,99.505,53.293)
C5': (33.199,102.496,51.479)
O6: (35.916,94.729,53.623)
O4': (32.350,100.363,52.167)
C8: (34.387,98.441,52.154)
C2: (33.141,95.929,55.483)
C6: (35.007,95.488,53.952)
C5: (34.621,96.707,53.359)
C4: (33.547,97.385,53.884)
P: (35.000,102.210,49.620)
C4': (32.584,101.724,52.606)
C2': (32.685,100.371,54.509)
O2': (31.483,100.782,55.142)
N1: (34.197,95.170,55.034)
N2: (32.466,95.460,56.542)
N3: (32.771,97.061,54.935)
N7: (35.145,97.384,52.268)
N9: (33.396,98.494,53.104)
O5': (34.386,101.852,51.039)
O3': (33.571,102.647,54.660)
C4: (37.021,91.447,53.968)
N3: (36.263,92.351,54.666)
OP1: (36.930,84.569,57.477)
OP2: (37.724,86.145,55.577)
C2: (35.728,92.180,55.905)
C1': (35.490,90.745,57.853)
C3': (34.021,88.909,57.928)
O5': (36.216,87.017,57.356)
O4': (36.170,89.636,58.418)
C5': (35.833,87.272,58.715)
P: (37.333,85.932,57.004)
C4': (35.212,88.639,58.832)
C2': (33.997,90.430,57.855)
O2': (33.409,91.060,58.961)
N1: (36.004,90.967,56.502)
O4: (37.474,91.763,52.868)
O2: (35.053,93.030,56.434)
C6: (36.739,90.013,55.850)
C5: (37.242,90.204,54.638)
O3': (32.818,88.373,58.459)
N3: (36.263,92.351,54.666)
OP1: (36.930,84.569,57.477)
OP2: (37.724,86.145,55.577)
C2: (35.728,92.180,55.905)
C1': (35.490,90.745,57.853)
C3': (34.021,88.909,57.928)
O5': (36.216,87.017,57.356)
O4': (36.170,89.636,58.418)
C5': (35.833,87.272,58.715)
P: (37.333,85.932,57.004)
C4': (35.212,88.639,58.832)
C2': (33.997,90.430,57.855)
O2': (33.409,91.060,58.961)
N1: (36.004,90.967,56.502)
O4: (37.474,91.763,52.868)
O2: (35.053,93.030,56.434)
C6: (36.739,90.013,55.850)
C5: (37.242,90.204,54.638)
O3': (32.818,88.373,58.459)
Image (generated by PyMOL):