Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3NDB:M31:M52
Extra
PDB:
ATOM 1 O3' A A 30 -54.554 22.842 -48.890 1.00 86.11 O
ATOM 2 P G A 31 -53.814 23.693 -47.762 1.00 83.19 P
ATOM 3 OP1 G A 31 -54.343 23.290 -46.455 1.00 85.43 O
ATOM 4 OP2 G A 31 -53.743 25.144 -48.035 1.00 81.82 O
ATOM 5 O5' G A 31 -52.365 23.049 -47.960 1.00 83.01 O
ATOM 6 C5' G A 31 -51.266 23.677 -47.330 1.00 80.55 C
ATOM 7 C4' G A 31 -49.982 23.364 -48.044 1.00 78.72 C
ATOM 8 O4' G A 31 -50.190 23.583 -49.449 1.00 79.02 O
ATOM 9 C3' G A 31 -48.900 24.345 -47.682 1.00 79.12 C
ATOM 10 O3' G A 31 -48.200 23.902 -46.534 1.00 79.26 O
ATOM 11 C2' G A 31 -48.059 24.395 -48.947 1.00 79.41 C
ATOM 12 O2' G A 31 -47.312 23.207 -49.085 1.00 81.99 O
ATOM 13 C1' G A 31 -49.174 24.415 -49.988 1.00 80.11 C
ATOM 14 N9 G A 31 -49.744 25.733 -50.345 1.00 80.32 N
ATOM 15 C8 G A 31 -51.066 26.092 -50.285 1.00 80.86 C
ATOM 16 N7 G A 31 -51.305 27.304 -50.662 1.00 80.76 N
ATOM 17 C5 G A 31 -50.068 27.803 -51.007 1.00 80.57 C
ATOM 18 C6 G A 31 -49.694 29.092 -51.488 1.00 81.31 C
ATOM 19 O6 G A 31 -50.419 30.078 -51.711 1.00 82.51 O
ATOM 20 N1 G A 31 -48.322 29.209 -51.709 1.00 80.07 N
ATOM 21 C2 G A 31 -47.425 28.192 -51.499 1.00 79.76 C
ATOM 22 N2 G A 31 -46.137 28.466 -51.760 1.00 79.28 N
ATOM 23 N3 G A 31 -47.770 26.981 -51.052 1.00 80.86 N
ATOM 24 C4 G A 31 -49.101 26.849 -50.827 1.00 80.15 C
ATOM 25 P C A 32 -48.301 24.790 -45.208 1.00 79.34 P
ATOM 26 OP1 C A 32 -47.710 23.963 -44.125 1.00 79.41 O
ATOM 27 OP2 C A 32 -49.709 25.284 -45.062 1.00 79.49 O
ATOM 28 O5' C A 32 -47.352 26.058 -45.509 1.00 76.68 O
TER
ATOM 1 O3' G B 51 -48.314 39.157 -55.115 1.00 97.94 O
ATOM 2 P U B 52 -48.538 38.256 -56.423 1.00100.73 P
ATOM 3 OP1 U B 52 -47.912 39.023 -57.522 1.00103.16 O
ATOM 4 OP2 U B 52 -49.957 37.855 -56.537 1.00100.90 O
ATOM 5 O5' U B 52 -47.736 36.883 -56.166 1.00 99.09 O
ATOM 6 C5' U B 52 -46.323 36.667 -56.343 1.00 97.15 C
ATOM 7 C4' U B 52 -46.011 35.285 -55.778 1.00 95.41 C
ATOM 8 O4' U B 52 -46.628 35.169 -54.461 1.00 94.51 O
ATOM 9 C3' U B 52 -46.613 34.131 -56.579 1.00 95.09 C
ATOM 10 O3' U B 52 -45.767 33.638 -57.593 1.00 91.78 O
ATOM 11 C2' U B 52 -46.846 33.046 -55.539 1.00 95.20 C
ATOM 12 O2' U B 52 -45.755 32.162 -55.354 1.00 95.98 O
ATOM 13 C1' U B 52 -47.153 33.859 -54.281 1.00 94.72 C
ATOM 14 N1 U B 52 -48.648 33.783 -54.047 1.00 95.39 N
ATOM 15 C2 U B 52 -49.130 32.631 -53.452 1.00 94.02 C
ATOM 16 O2 U B 52 -48.410 31.728 -53.094 1.00 93.91 O
ATOM 17 N3 U B 52 -50.479 32.557 -53.268 1.00 94.17 N
ATOM 18 C4 U B 52 -51.408 33.507 -53.619 1.00 96.26 C
ATOM 19 O4 U B 52 -52.599 33.295 -53.376 1.00 97.19 O
ATOM 20 C5 U B 52 -50.841 34.682 -54.249 1.00 97.48 C
ATOM 21 C6 U B 52 -49.514 34.784 -54.447 1.00 96.58 C
ATOM 22 P A B 53 -46.275 33.795 -59.095 1.00 90.99 P
ATOM 23 OP1 A B 53 -45.055 34.330 -59.754 1.00 91.54 O
ATOM 24 OP2 A B 53 -47.563 34.524 -59.072 1.00 90.79 O
ATOM 25 O5' A B 53 -46.630 32.344 -59.696 1.00 88.36 O
TER
ATOM 2 P G A 31 -53.814 23.693 -47.762 1.00 83.19 P
ATOM 3 OP1 G A 31 -54.343 23.290 -46.455 1.00 85.43 O
ATOM 4 OP2 G A 31 -53.743 25.144 -48.035 1.00 81.82 O
ATOM 5 O5' G A 31 -52.365 23.049 -47.960 1.00 83.01 O
ATOM 6 C5' G A 31 -51.266 23.677 -47.330 1.00 80.55 C
ATOM 7 C4' G A 31 -49.982 23.364 -48.044 1.00 78.72 C
ATOM 8 O4' G A 31 -50.190 23.583 -49.449 1.00 79.02 O
ATOM 9 C3' G A 31 -48.900 24.345 -47.682 1.00 79.12 C
ATOM 10 O3' G A 31 -48.200 23.902 -46.534 1.00 79.26 O
ATOM 11 C2' G A 31 -48.059 24.395 -48.947 1.00 79.41 C
ATOM 12 O2' G A 31 -47.312 23.207 -49.085 1.00 81.99 O
ATOM 13 C1' G A 31 -49.174 24.415 -49.988 1.00 80.11 C
ATOM 14 N9 G A 31 -49.744 25.733 -50.345 1.00 80.32 N
ATOM 15 C8 G A 31 -51.066 26.092 -50.285 1.00 80.86 C
ATOM 16 N7 G A 31 -51.305 27.304 -50.662 1.00 80.76 N
ATOM 17 C5 G A 31 -50.068 27.803 -51.007 1.00 80.57 C
ATOM 18 C6 G A 31 -49.694 29.092 -51.488 1.00 81.31 C
ATOM 19 O6 G A 31 -50.419 30.078 -51.711 1.00 82.51 O
ATOM 20 N1 G A 31 -48.322 29.209 -51.709 1.00 80.07 N
ATOM 21 C2 G A 31 -47.425 28.192 -51.499 1.00 79.76 C
ATOM 22 N2 G A 31 -46.137 28.466 -51.760 1.00 79.28 N
ATOM 23 N3 G A 31 -47.770 26.981 -51.052 1.00 80.86 N
ATOM 24 C4 G A 31 -49.101 26.849 -50.827 1.00 80.15 C
ATOM 25 P C A 32 -48.301 24.790 -45.208 1.00 79.34 P
ATOM 26 OP1 C A 32 -47.710 23.963 -44.125 1.00 79.41 O
ATOM 27 OP2 C A 32 -49.709 25.284 -45.062 1.00 79.49 O
ATOM 28 O5' C A 32 -47.352 26.058 -45.509 1.00 76.68 O
TER
ATOM 1 O3' G B 51 -48.314 39.157 -55.115 1.00 97.94 O
ATOM 2 P U B 52 -48.538 38.256 -56.423 1.00100.73 P
ATOM 3 OP1 U B 52 -47.912 39.023 -57.522 1.00103.16 O
ATOM 4 OP2 U B 52 -49.957 37.855 -56.537 1.00100.90 O
ATOM 5 O5' U B 52 -47.736 36.883 -56.166 1.00 99.09 O
ATOM 6 C5' U B 52 -46.323 36.667 -56.343 1.00 97.15 C
ATOM 7 C4' U B 52 -46.011 35.285 -55.778 1.00 95.41 C
ATOM 8 O4' U B 52 -46.628 35.169 -54.461 1.00 94.51 O
ATOM 9 C3' U B 52 -46.613 34.131 -56.579 1.00 95.09 C
ATOM 10 O3' U B 52 -45.767 33.638 -57.593 1.00 91.78 O
ATOM 11 C2' U B 52 -46.846 33.046 -55.539 1.00 95.20 C
ATOM 12 O2' U B 52 -45.755 32.162 -55.354 1.00 95.98 O
ATOM 13 C1' U B 52 -47.153 33.859 -54.281 1.00 94.72 C
ATOM 14 N1 U B 52 -48.648 33.783 -54.047 1.00 95.39 N
ATOM 15 C2 U B 52 -49.130 32.631 -53.452 1.00 94.02 C
ATOM 16 O2 U B 52 -48.410 31.728 -53.094 1.00 93.91 O
ATOM 17 N3 U B 52 -50.479 32.557 -53.268 1.00 94.17 N
ATOM 18 C4 U B 52 -51.408 33.507 -53.619 1.00 96.26 C
ATOM 19 O4 U B 52 -52.599 33.295 -53.376 1.00 97.19 O
ATOM 20 C5 U B 52 -50.841 34.682 -54.249 1.00 97.48 C
ATOM 21 C6 U B 52 -49.514 34.784 -54.447 1.00 96.58 C
ATOM 22 P A B 53 -46.275 33.795 -59.095 1.00 90.99 P
ATOM 23 OP1 A B 53 -45.055 34.330 -59.754 1.00 91.54 O
ATOM 24 OP2 A B 53 -47.563 34.524 -59.072 1.00 90.79 O
ATOM 25 O5' A B 53 -46.630 32.344 -59.696 1.00 88.36 O
TER
Atoms:
OP1: (-54.343,23.290,-46.455)
OP2: (-53.743,25.144,-48.035)
C3': (-48.900,24.345,-47.682)
C1': (-49.174,24.415,-49.988)
C5': (-51.266,23.677,-47.330)
O6: (-50.419,30.078,-51.711)
O4': (-50.190,23.583,-49.449)
C8: (-51.066,26.092,-50.285)
C2: (-47.425,28.192,-51.499)
C6: (-49.694,29.092,-51.488)
C5: (-50.068,27.803,-51.007)
C4: (-49.101,26.849,-50.827)
P: (-53.814,23.693,-47.762)
C4': (-49.982,23.364,-48.044)
C2': (-48.059,24.395,-48.947)
O2': (-47.312,23.207,-49.085)
N1: (-48.322,29.209,-51.709)
N2: (-46.137,28.466,-51.760)
N3: (-47.770,26.981,-51.052)
N7: (-51.305,27.304,-50.662)
N9: (-49.744,25.733,-50.345)
O5': (-52.365,23.049,-47.960)
O3': (-48.200,23.902,-46.534)
OP2: (-53.743,25.144,-48.035)
C3': (-48.900,24.345,-47.682)
C1': (-49.174,24.415,-49.988)
C5': (-51.266,23.677,-47.330)
O6: (-50.419,30.078,-51.711)
O4': (-50.190,23.583,-49.449)
C8: (-51.066,26.092,-50.285)
C2: (-47.425,28.192,-51.499)
C6: (-49.694,29.092,-51.488)
C5: (-50.068,27.803,-51.007)
C4: (-49.101,26.849,-50.827)
P: (-53.814,23.693,-47.762)
C4': (-49.982,23.364,-48.044)
C2': (-48.059,24.395,-48.947)
O2': (-47.312,23.207,-49.085)
N1: (-48.322,29.209,-51.709)
N2: (-46.137,28.466,-51.760)
N3: (-47.770,26.981,-51.052)
N7: (-51.305,27.304,-50.662)
N9: (-49.744,25.733,-50.345)
O5': (-52.365,23.049,-47.960)
O3': (-48.200,23.902,-46.534)
C4: (-51.408,33.507,-53.619)
N3: (-50.479,32.557,-53.268)
OP1: (-47.912,39.023,-57.522)
OP2: (-49.957,37.855,-56.537)
C2: (-49.130,32.631,-53.452)
C1': (-47.153,33.859,-54.281)
C3': (-46.613,34.131,-56.579)
O5': (-47.736,36.883,-56.166)
O4': (-46.628,35.169,-54.461)
C5': (-46.323,36.667,-56.343)
P: (-48.538,38.256,-56.423)
C4': (-46.011,35.285,-55.778)
C2': (-46.846,33.046,-55.539)
O2': (-45.755,32.162,-55.354)
N1: (-48.648,33.783,-54.047)
O4: (-52.599,33.295,-53.376)
O2: (-48.410,31.728,-53.094)
C6: (-49.514,34.784,-54.447)
C5: (-50.841,34.682,-54.249)
O3': (-45.767,33.638,-57.593)
N3: (-50.479,32.557,-53.268)
OP1: (-47.912,39.023,-57.522)
OP2: (-49.957,37.855,-56.537)
C2: (-49.130,32.631,-53.452)
C1': (-47.153,33.859,-54.281)
C3': (-46.613,34.131,-56.579)
O5': (-47.736,36.883,-56.166)
O4': (-46.628,35.169,-54.461)
C5': (-46.323,36.667,-56.343)
P: (-48.538,38.256,-56.423)
C4': (-46.011,35.285,-55.778)
C2': (-46.846,33.046,-55.539)
O2': (-45.755,32.162,-55.354)
N1: (-48.648,33.783,-54.047)
O4: (-52.599,33.295,-53.376)
O2: (-48.410,31.728,-53.094)
C6: (-49.514,34.784,-54.447)
C5: (-50.841,34.682,-54.249)
O3': (-45.767,33.638,-57.593)
Image (generated by PyMOL):