Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PXE:B2:B46
Extra
PDB:
ATOM 1 O3' G A 1 8.433 4.847 2.054 1.00 29.47 O
ATOM 2 P G A 2 9.802 5.685 2.092 1.00 27.90 P
ATOM 3 OP1 G A 2 10.889 4.825 2.624 1.00 32.45 O
ATOM 4 OP2 G A 2 9.497 6.971 2.763 1.00 32.98 O
ATOM 5 O5' G A 2 10.110 6.012 0.561 1.00 27.02 O
ATOM 6 C5' G A 2 10.520 4.985 -0.333 1.00 26.10 C
ATOM 7 C4' G A 2 10.768 5.544 -1.717 1.00 25.18 C
ATOM 8 O4' G A 2 9.549 6.117 -2.258 1.00 24.96 O
ATOM 9 C3' G A 2 11.751 6.691 -1.821 1.00 26.38 C
ATOM 10 O3' G A 2 13.089 6.222 -1.783 1.00 26.86 O
ATOM 11 C2' G A 2 11.399 7.260 -3.187 1.00 25.01 C
ATOM 12 O2' G A 2 11.885 6.433 -4.221 1.00 25.73 O
ATOM 13 C1' G A 2 9.876 7.171 -3.156 1.00 23.80 C
ATOM 14 N9 G A 2 9.254 8.398 -2.672 1.00 25.96 N
ATOM 15 C8 G A 2 8.684 8.603 -1.442 1.00 25.39 C
ATOM 16 N7 G A 2 8.209 9.811 -1.293 1.00 26.28 N
ATOM 17 C5 G A 2 8.481 10.442 -2.498 1.00 24.64 C
ATOM 18 C6 G A 2 8.216 11.778 -2.926 1.00 24.92 C
ATOM 19 O6 G A 2 7.674 12.706 -2.298 1.00 23.55 O
ATOM 20 N1 G A 2 8.663 11.992 -4.225 1.00 24.24 N
ATOM 21 C2 G A 2 9.285 11.057 -5.009 1.00 23.68 C
ATOM 22 N2 G A 2 9.625 11.452 -6.237 1.00 24.64 N
ATOM 23 N3 G A 2 9.551 9.823 -4.620 1.00 25.83 N
ATOM 24 C4 G A 2 9.123 9.584 -3.362 1.00 25.76 C
ATOM 25 P U A 3 14.197 7.068 -0.991 1.00 31.47 P
ATOM 26 OP1 U A 3 15.486 6.338 -1.102 1.00 26.51 O
ATOM 27 OP2 U A 3 13.629 7.358 0.349 1.00 27.02 O
ATOM 28 O5' U A 3 14.295 8.430 -1.814 1.00 30.05 O
TER
ATOM 1 O3' G B 45 6.262 22.119 -5.835 1.00 32.85 O
ATOM 2 P U B 46 5.048 21.336 -6.514 1.00 30.08 P
ATOM 3 OP1 U B 46 4.670 22.133 -7.709 1.00 30.18 O
ATOM 4 OP2 U B 46 4.040 21.063 -5.459 1.00 29.87 O
ATOM 5 O5' U B 46 5.691 19.959 -6.979 1.00 26.52 O
ATOM 6 C5' U B 46 6.573 19.925 -8.080 1.00 27.09 C
ATOM 7 C4' U B 46 7.198 18.562 -8.213 1.00 26.74 C
ATOM 8 O4' U B 46 8.039 18.284 -7.060 1.00 26.85 O
ATOM 9 C3' U B 46 6.243 17.386 -8.242 1.00 26.87 C
ATOM 10 O3' U B 46 5.691 17.216 -9.535 1.00 28.79 O
ATOM 11 C2' U B 46 7.188 16.244 -7.909 1.00 26.78 C
ATOM 12 O2' U B 46 7.989 15.923 -9.026 1.00 27.16 O
ATOM 13 C1' U B 46 8.045 16.884 -6.812 1.00 25.78 C
ATOM 14 N1 U B 46 7.474 16.645 -5.478 1.00 23.31 N
ATOM 15 C2 U B 46 7.767 15.441 -4.859 1.00 22.26 C
ATOM 16 O2 U B 46 8.498 14.602 -5.356 1.00 23.20 O
ATOM 17 N3 U B 46 7.173 15.259 -3.636 1.00 20.08 N
ATOM 18 C4 U B 46 6.334 16.141 -2.983 1.00 19.97 C
ATOM 19 O4 U B 46 5.869 15.831 -1.887 1.00 18.09 O
ATOM 20 C5 U B 46 6.094 17.369 -3.680 1.00 19.63 C
ATOM 21 C6 U B 46 6.661 17.574 -4.871 1.00 21.84 C
ATOM 22 P C B 47 4.217 16.598 -9.700 1.00 32.24 P
ATOM 23 OP1 C B 47 3.805 16.906 -11.089 1.00 34.28 O
ATOM 24 OP2 C B 47 3.367 17.037 -8.566 1.00 32.46 O
ATOM 25 O5' C B 47 4.427 15.027 -9.576 1.00 33.00 O
TER
ATOM 2 P G A 2 9.802 5.685 2.092 1.00 27.90 P
ATOM 3 OP1 G A 2 10.889 4.825 2.624 1.00 32.45 O
ATOM 4 OP2 G A 2 9.497 6.971 2.763 1.00 32.98 O
ATOM 5 O5' G A 2 10.110 6.012 0.561 1.00 27.02 O
ATOM 6 C5' G A 2 10.520 4.985 -0.333 1.00 26.10 C
ATOM 7 C4' G A 2 10.768 5.544 -1.717 1.00 25.18 C
ATOM 8 O4' G A 2 9.549 6.117 -2.258 1.00 24.96 O
ATOM 9 C3' G A 2 11.751 6.691 -1.821 1.00 26.38 C
ATOM 10 O3' G A 2 13.089 6.222 -1.783 1.00 26.86 O
ATOM 11 C2' G A 2 11.399 7.260 -3.187 1.00 25.01 C
ATOM 12 O2' G A 2 11.885 6.433 -4.221 1.00 25.73 O
ATOM 13 C1' G A 2 9.876 7.171 -3.156 1.00 23.80 C
ATOM 14 N9 G A 2 9.254 8.398 -2.672 1.00 25.96 N
ATOM 15 C8 G A 2 8.684 8.603 -1.442 1.00 25.39 C
ATOM 16 N7 G A 2 8.209 9.811 -1.293 1.00 26.28 N
ATOM 17 C5 G A 2 8.481 10.442 -2.498 1.00 24.64 C
ATOM 18 C6 G A 2 8.216 11.778 -2.926 1.00 24.92 C
ATOM 19 O6 G A 2 7.674 12.706 -2.298 1.00 23.55 O
ATOM 20 N1 G A 2 8.663 11.992 -4.225 1.00 24.24 N
ATOM 21 C2 G A 2 9.285 11.057 -5.009 1.00 23.68 C
ATOM 22 N2 G A 2 9.625 11.452 -6.237 1.00 24.64 N
ATOM 23 N3 G A 2 9.551 9.823 -4.620 1.00 25.83 N
ATOM 24 C4 G A 2 9.123 9.584 -3.362 1.00 25.76 C
ATOM 25 P U A 3 14.197 7.068 -0.991 1.00 31.47 P
ATOM 26 OP1 U A 3 15.486 6.338 -1.102 1.00 26.51 O
ATOM 27 OP2 U A 3 13.629 7.358 0.349 1.00 27.02 O
ATOM 28 O5' U A 3 14.295 8.430 -1.814 1.00 30.05 O
TER
ATOM 1 O3' G B 45 6.262 22.119 -5.835 1.00 32.85 O
ATOM 2 P U B 46 5.048 21.336 -6.514 1.00 30.08 P
ATOM 3 OP1 U B 46 4.670 22.133 -7.709 1.00 30.18 O
ATOM 4 OP2 U B 46 4.040 21.063 -5.459 1.00 29.87 O
ATOM 5 O5' U B 46 5.691 19.959 -6.979 1.00 26.52 O
ATOM 6 C5' U B 46 6.573 19.925 -8.080 1.00 27.09 C
ATOM 7 C4' U B 46 7.198 18.562 -8.213 1.00 26.74 C
ATOM 8 O4' U B 46 8.039 18.284 -7.060 1.00 26.85 O
ATOM 9 C3' U B 46 6.243 17.386 -8.242 1.00 26.87 C
ATOM 10 O3' U B 46 5.691 17.216 -9.535 1.00 28.79 O
ATOM 11 C2' U B 46 7.188 16.244 -7.909 1.00 26.78 C
ATOM 12 O2' U B 46 7.989 15.923 -9.026 1.00 27.16 O
ATOM 13 C1' U B 46 8.045 16.884 -6.812 1.00 25.78 C
ATOM 14 N1 U B 46 7.474 16.645 -5.478 1.00 23.31 N
ATOM 15 C2 U B 46 7.767 15.441 -4.859 1.00 22.26 C
ATOM 16 O2 U B 46 8.498 14.602 -5.356 1.00 23.20 O
ATOM 17 N3 U B 46 7.173 15.259 -3.636 1.00 20.08 N
ATOM 18 C4 U B 46 6.334 16.141 -2.983 1.00 19.97 C
ATOM 19 O4 U B 46 5.869 15.831 -1.887 1.00 18.09 O
ATOM 20 C5 U B 46 6.094 17.369 -3.680 1.00 19.63 C
ATOM 21 C6 U B 46 6.661 17.574 -4.871 1.00 21.84 C
ATOM 22 P C B 47 4.217 16.598 -9.700 1.00 32.24 P
ATOM 23 OP1 C B 47 3.805 16.906 -11.089 1.00 34.28 O
ATOM 24 OP2 C B 47 3.367 17.037 -8.566 1.00 32.46 O
ATOM 25 O5' C B 47 4.427 15.027 -9.576 1.00 33.00 O
TER
Atoms:
OP1: (10.889,4.825,2.624)
OP2: (9.497,6.971,2.763)
C3': (11.751,6.691,-1.821)
C1': (9.876,7.171,-3.156)
C5': (10.520,4.985,-0.333)
O6: (7.674,12.706,-2.298)
O4': (9.549,6.117,-2.258)
C8: (8.684,8.603,-1.442)
C2: (9.285,11.057,-5.009)
C6: (8.216,11.778,-2.926)
C5: (8.481,10.442,-2.498)
C4: (9.123,9.584,-3.362)
P: (9.802,5.685,2.092)
C4': (10.768,5.544,-1.717)
C2': (11.399,7.260,-3.187)
O2': (11.885,6.433,-4.221)
N1: (8.663,11.992,-4.225)
N2: (9.625,11.452,-6.237)
N3: (9.551,9.823,-4.620)
N7: (8.209,9.811,-1.293)
N9: (9.254,8.398,-2.672)
O5': (10.110,6.012,0.561)
O3': (13.089,6.222,-1.783)
OP2: (9.497,6.971,2.763)
C3': (11.751,6.691,-1.821)
C1': (9.876,7.171,-3.156)
C5': (10.520,4.985,-0.333)
O6: (7.674,12.706,-2.298)
O4': (9.549,6.117,-2.258)
C8: (8.684,8.603,-1.442)
C2: (9.285,11.057,-5.009)
C6: (8.216,11.778,-2.926)
C5: (8.481,10.442,-2.498)
C4: (9.123,9.584,-3.362)
P: (9.802,5.685,2.092)
C4': (10.768,5.544,-1.717)
C2': (11.399,7.260,-3.187)
O2': (11.885,6.433,-4.221)
N1: (8.663,11.992,-4.225)
N2: (9.625,11.452,-6.237)
N3: (9.551,9.823,-4.620)
N7: (8.209,9.811,-1.293)
N9: (9.254,8.398,-2.672)
O5': (10.110,6.012,0.561)
O3': (13.089,6.222,-1.783)
C4: (6.334,16.141,-2.983)
N3: (7.173,15.259,-3.636)
OP1: (4.670,22.133,-7.709)
OP2: (4.040,21.063,-5.459)
C2: (7.767,15.441,-4.859)
C1': (8.045,16.884,-6.812)
C3': (6.243,17.386,-8.242)
O5': (5.691,19.959,-6.979)
O4': (8.039,18.284,-7.060)
C5': (6.573,19.925,-8.080)
P: (5.048,21.336,-6.514)
C4': (7.198,18.562,-8.213)
C2': (7.188,16.244,-7.909)
O2': (7.989,15.923,-9.026)
N1: (7.474,16.645,-5.478)
O4: (5.869,15.831,-1.887)
O2: (8.498,14.602,-5.356)
C6: (6.661,17.574,-4.871)
C5: (6.094,17.369,-3.680)
O3': (5.691,17.216,-9.535)
N3: (7.173,15.259,-3.636)
OP1: (4.670,22.133,-7.709)
OP2: (4.040,21.063,-5.459)
C2: (7.767,15.441,-4.859)
C1': (8.045,16.884,-6.812)
C3': (6.243,17.386,-8.242)
O5': (5.691,19.959,-6.979)
O4': (8.039,18.284,-7.060)
C5': (6.573,19.925,-8.080)
P: (5.048,21.336,-6.514)
C4': (7.198,18.562,-8.213)
C2': (7.188,16.244,-7.909)
O2': (7.989,15.923,-9.026)
N1: (7.474,16.645,-5.478)
O4: (5.869,15.831,-1.887)
O2: (8.498,14.602,-5.356)
C6: (6.661,17.574,-4.871)
C5: (6.094,17.369,-3.680)
O3': (5.691,17.216,-9.535)
Image (generated by PyMOL):