ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A742:A706

Extra

PDB:
ATOM 1 O3' G A 741 41.438 -34.198 5.682 1.00 36.79 O
ATOM 2 P A A 742 41.701 -35.272 4.536 1.00 44.57 P
ATOM 3 OP1 A A 742 42.141 -36.513 5.199 1.00 60.99 O
ATOM 4 OP2 A A 742 42.598 -34.648 3.537 1.00 35.23 O
ATOM 5 O5' A A 742 40.263 -35.483 3.899 1.00 63.33 O
ATOM 6 C5' A A 742 40.115 -36.146 2.642 1.00 52.77 C
ATOM 7 C4' A A 742 38.685 -36.551 2.388 1.00 45.24 C
ATOM 8 O4' A A 742 37.831 -35.390 2.469 1.00 39.56 O
ATOM 9 C3' A A 742 38.404 -37.129 1.024 1.00 42.02 C
ATOM 10 O3' A A 742 38.677 -38.501 0.952 1.00 40.11 O
ATOM 11 C2' A A 742 36.944 -36.798 0.794 1.00 56.11 C
ATOM 12 O2' A A 742 36.104 -37.729 1.453 1.00 61.14 O
ATOM 13 C1' A A 742 36.826 -35.458 1.499 1.00 53.83 C
ATOM 14 N9 A A 742 36.998 -34.341 0.566 1.00 48.00 N
ATOM 15 C8 A A 742 37.970 -33.402 0.477 1.00 47.75 C
ATOM 16 N7 A A 742 37.776 -32.543 -0.488 1.00 50.02 N
ATOM 17 C5 A A 742 36.615 -32.978 -1.066 1.00 52.44 C
ATOM 18 C6 A A 742 35.889 -32.487 -2.148 1.00 61.95 C
ATOM 19 N6 A A 742 36.299 -31.406 -2.833 1.00 63.08 N
ATOM 20 N1 A A 742 34.739 -33.150 -2.464 1.00 53.94 N
ATOM 21 C2 A A 742 34.388 -34.229 -1.739 1.00 52.07 C
ATOM 22 N3 A A 742 35.003 -34.783 -0.693 1.00 49.18 N
ATOM 23 C4 A A 742 36.119 -34.088 -0.428 1.00 51.69 C
ATOM 24 P A A 743 39.401 -39.082 -0.349 1.00 54.99 P
ATOM 25 OP1 A A 743 39.531 -40.558 -0.162 1.00 40.36 O
ATOM 26 OP2 A A 743 40.632 -38.268 -0.552 1.00 45.47 O
ATOM 27 O5' A A 743 38.361 -38.769 -1.518 1.00 47.86 O
TER

ATOM 1 O3' C B 705 31.284 -32.793 -9.514 1.00 50.93 O
ATOM 2 P C B 706 30.949 -31.710 -8.412 1.00 52.33 P
ATOM 3 OP1 C B 706 30.160 -32.396 -7.369 1.00 48.13 O
ATOM 4 OP2 C B 706 30.371 -30.536 -9.112 1.00 49.04 O
ATOM 5 O5' C B 706 32.380 -31.333 -7.851 1.00 61.55 O
ATOM 6 C5' C B 706 33.109 -32.219 -7.024 1.00 55.10 C
ATOM 7 C4' C B 706 34.288 -31.511 -6.438 1.00 52.92 C
ATOM 8 O4' C B 706 35.250 -31.238 -7.486 1.00 56.84 O
ATOM 9 C3' C B 706 33.975 -30.149 -5.848 1.00 50.13 C
ATOM 10 O3' C B 706 33.521 -30.236 -4.521 1.00 48.42 O
ATOM 11 C2' C B 706 35.282 -29.387 -5.983 1.00 53.56 C
ATOM 12 O2' C B 706 36.123 -29.674 -4.886 1.00 59.49 O
ATOM 13 C1' C B 706 35.894 -30.003 -7.246 1.00 59.80 C
ATOM 14 N1 C B 706 35.749 -29.136 -8.456 1.00 48.89 N
ATOM 15 C2 C B 706 36.788 -28.305 -8.865 1.00 50.48 C
ATOM 16 O2 C B 706 37.806 -28.267 -8.178 1.00 55.28 O
ATOM 17 N3 C B 706 36.672 -27.549 -9.976 1.00 48.90 N
ATOM 18 C4 C B 706 35.557 -27.607 -10.701 1.00 54.06 C
ATOM 19 N4 C B 706 35.428 -26.862 -11.802 1.00 54.03 N
ATOM 20 C5 C B 706 34.497 -28.458 -10.325 1.00 58.42 C
ATOM 21 C6 C B 706 34.636 -29.200 -9.219 1.00 53.23 C
ATOM 22 P A B 707 32.904 -28.948 -3.796 1.00 66.10 P
ATOM 23 OP1 A B 707 32.034 -28.271 -4.787 1.00 54.97 O
ATOM 24 OP2 A B 707 34.046 -28.183 -3.198 1.00 54.11 O
ATOM 25 O5' A B 707 32.018 -29.599 -2.646 1.00 44.25 O
TER

Atoms:
OP1: (42.141,-36.513,5.199)
OP2: (42.598,-34.648,3.537)
C3': (38.404,-37.129,1.024)
C1': (36.826,-35.458,1.499)
C5': (40.115,-36.146,2.642)
O4': (37.831,-35.390,2.469)
C8: (37.970,-33.402,0.477)
O2': (36.104,-37.729,1.453)
C6: (35.889,-32.487,-2.148)
C5: (36.615,-32.978,-1.066)
C4: (36.119,-34.088,-0.428)
P: (41.701,-35.272,4.536)
C4': (38.685,-36.551,2.388)
C2': (36.944,-36.798,0.794)
C2: (34.388,-34.229,-1.739)
N1: (34.739,-33.150,-2.464)
N3: (35.003,-34.783,-0.693)
N6: (36.299,-31.406,-2.833)
N7: (37.776,-32.543,-0.488)
N9: (36.998,-34.341,0.566)
O5': (40.263,-35.483,3.899)
O3': (38.677,-38.501,0.952)
C2: (36.788,-28.305,-8.865)
OP1: (30.160,-32.396,-7.369)
OP2: (30.371,-30.536,-9.112)
C4: (35.557,-27.607,-10.701)
O5': (32.380,-31.333,-7.851)
C3': (33.975,-30.149,-5.848)
C1': (35.894,-30.003,-7.246)
O4': (35.250,-31.238,-7.486)
C5': (33.109,-32.219,-7.024)
P: (30.949,-31.710,-8.412)
O2: (37.806,-28.267,-8.178)
C4': (34.288,-31.511,-6.438)
C2': (35.282,-29.387,-5.983)
O2': (36.123,-29.674,-4.886)
N1: (35.749,-29.136,-8.456)
N3: (36.672,-27.549,-9.976)
N4: (35.428,-26.862,-11.802)
C6: (34.636,-29.200,-9.219)
C5: (34.497,-28.458,-10.325)
O3': (33.521,-30.236,-4.521)
Image (generated by PyMOL):
PyMOL image
show in jmol