Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21100:21111
Extra
PDB:
ATOM 1 O3' U A1099 -34.529 21.511 79.504 1.00 54.90 O
ATOM 2 P G A1100 -33.495 21.476 80.721 1.00 52.19 P
ATOM 3 OP1 G A1100 -32.192 21.923 80.163 1.00 52.16 O
ATOM 4 OP2 G A1100 -33.598 20.137 81.365 1.00 52.11 O
ATOM 5 O5' G A1100 -34.053 22.591 81.693 1.00 52.29 O
ATOM 6 C5' G A1100 -33.988 23.955 81.334 1.00 52.39 C
ATOM 7 C4' G A1100 -34.912 24.774 82.190 1.00 52.51 C
ATOM 8 O4' G A1100 -36.300 24.349 81.998 1.00 52.60 O
ATOM 9 C3' G A1100 -34.721 24.644 83.680 1.00 52.47 C
ATOM 10 O3' G A1100 -33.616 25.376 84.146 1.00 52.45 O
ATOM 11 C2' G A1100 -36.041 25.170 84.200 1.00 52.63 C
ATOM 12 O2' G A1100 -36.049 26.575 84.062 1.00 52.74 O
ATOM 13 C1' G A1100 -37.026 24.575 83.183 1.00 52.67 C
ATOM 14 N9 G A1100 -37.587 23.290 83.637 1.00 52.64 N
ATOM 15 C8 G A1100 -37.262 22.029 83.192 1.00 52.51 C
ATOM 16 N7 G A1100 -37.938 21.066 83.772 1.00 52.53 N
ATOM 17 C5 G A1100 -38.773 21.720 84.655 1.00 52.68 C
ATOM 18 C6 G A1100 -39.707 21.202 85.568 1.00 52.78 C
ATOM 19 O6 G A1100 -40.010 20.013 85.786 1.00 52.77 O
ATOM 20 N1 G A1100 -40.324 22.221 86.263 1.00 52.94 N
ATOM 21 C2 G A1100 -40.062 23.545 86.110 1.00 52.98 C
ATOM 22 N2 G A1100 -40.750 24.395 86.858 1.00 53.15 N
ATOM 23 N3 G A1100 -39.202 24.056 85.273 1.00 52.89 N
ATOM 24 C4 G A1100 -38.582 23.085 84.579 1.00 52.74 C
ATOM 25 P G A1101 -32.985 25.037 85.581 1.00 55.37 P
ATOM 26 OP1 G A1101 -31.882 26.018 85.822 1.00 55.37 O
ATOM 27 OP2 G A1101 -32.679 23.572 85.602 1.00 55.26 O
ATOM 28 O5' G A1101 -34.193 25.338 86.577 1.00 55.49 O
TER
ATOM 1 O3' C B1110 -46.642 17.659 93.280 1.00 53.31 O
ATOM 2 P U B1111 -47.548 17.493 91.991 1.00 53.34 P
ATOM 3 OP1 U B1111 -48.958 17.737 92.399 1.00 53.67 O
ATOM 4 OP2 U B1111 -47.199 16.186 91.400 1.00 53.19 O
ATOM 5 O5' U B1111 -47.023 18.683 91.075 1.00 53.17 O
ATOM 6 C5' U B1111 -47.270 20.025 91.452 1.00 53.30 C
ATOM 7 C4' U B1111 -46.385 20.999 90.731 1.00 53.11 C
ATOM 8 O4' U B1111 -44.991 20.647 90.932 1.00 52.85 O
ATOM 9 C3' U B1111 -46.515 21.049 89.225 1.00 53.03 C
ATOM 10 O3' U B1111 -47.680 21.706 88.767 1.00 53.27 O
ATOM 11 C2' U B1111 -45.209 21.725 88.832 1.00 52.80 C
ATOM 12 O2' U B1111 -45.224 23.119 89.124 1.00 52.90 O
ATOM 13 C1' U B1111 -44.236 21.046 89.798 1.00 52.66 C
ATOM 14 N1 U B1111 -43.625 19.853 89.149 1.00 52.46 N
ATOM 15 C2 U B1111 -42.530 20.126 88.309 1.00 52.25 C
ATOM 16 O2 U B1111 -42.033 21.222 88.143 1.00 52.21 O
ATOM 17 N3 U B1111 -42.033 19.063 87.647 1.00 52.10 N
ATOM 18 C4 U B1111 -42.544 17.816 87.741 1.00 52.14 C
ATOM 19 O4 U B1111 -41.997 16.987 87.075 1.00 52.00 O
ATOM 20 C5 U B1111 -43.673 17.582 88.579 1.00 52.36 C
ATOM 21 C6 U B1111 -44.193 18.599 89.234 1.00 52.52 C
ATOM 22 P G B1112 -48.802 20.862 87.957 1.00 58.15 P
ATOM 23 OP1 G B1112 -50.035 21.706 87.830 1.00 58.47 O
ATOM 24 OP2 G B1112 -48.919 19.548 88.617 1.00 58.14 O
ATOM 25 O5' G B1112 -48.131 20.681 86.530 1.00 57.93 O
TER
ATOM 2 P G A1100 -33.495 21.476 80.721 1.00 52.19 P
ATOM 3 OP1 G A1100 -32.192 21.923 80.163 1.00 52.16 O
ATOM 4 OP2 G A1100 -33.598 20.137 81.365 1.00 52.11 O
ATOM 5 O5' G A1100 -34.053 22.591 81.693 1.00 52.29 O
ATOM 6 C5' G A1100 -33.988 23.955 81.334 1.00 52.39 C
ATOM 7 C4' G A1100 -34.912 24.774 82.190 1.00 52.51 C
ATOM 8 O4' G A1100 -36.300 24.349 81.998 1.00 52.60 O
ATOM 9 C3' G A1100 -34.721 24.644 83.680 1.00 52.47 C
ATOM 10 O3' G A1100 -33.616 25.376 84.146 1.00 52.45 O
ATOM 11 C2' G A1100 -36.041 25.170 84.200 1.00 52.63 C
ATOM 12 O2' G A1100 -36.049 26.575 84.062 1.00 52.74 O
ATOM 13 C1' G A1100 -37.026 24.575 83.183 1.00 52.67 C
ATOM 14 N9 G A1100 -37.587 23.290 83.637 1.00 52.64 N
ATOM 15 C8 G A1100 -37.262 22.029 83.192 1.00 52.51 C
ATOM 16 N7 G A1100 -37.938 21.066 83.772 1.00 52.53 N
ATOM 17 C5 G A1100 -38.773 21.720 84.655 1.00 52.68 C
ATOM 18 C6 G A1100 -39.707 21.202 85.568 1.00 52.78 C
ATOM 19 O6 G A1100 -40.010 20.013 85.786 1.00 52.77 O
ATOM 20 N1 G A1100 -40.324 22.221 86.263 1.00 52.94 N
ATOM 21 C2 G A1100 -40.062 23.545 86.110 1.00 52.98 C
ATOM 22 N2 G A1100 -40.750 24.395 86.858 1.00 53.15 N
ATOM 23 N3 G A1100 -39.202 24.056 85.273 1.00 52.89 N
ATOM 24 C4 G A1100 -38.582 23.085 84.579 1.00 52.74 C
ATOM 25 P G A1101 -32.985 25.037 85.581 1.00 55.37 P
ATOM 26 OP1 G A1101 -31.882 26.018 85.822 1.00 55.37 O
ATOM 27 OP2 G A1101 -32.679 23.572 85.602 1.00 55.26 O
ATOM 28 O5' G A1101 -34.193 25.338 86.577 1.00 55.49 O
TER
ATOM 1 O3' C B1110 -46.642 17.659 93.280 1.00 53.31 O
ATOM 2 P U B1111 -47.548 17.493 91.991 1.00 53.34 P
ATOM 3 OP1 U B1111 -48.958 17.737 92.399 1.00 53.67 O
ATOM 4 OP2 U B1111 -47.199 16.186 91.400 1.00 53.19 O
ATOM 5 O5' U B1111 -47.023 18.683 91.075 1.00 53.17 O
ATOM 6 C5' U B1111 -47.270 20.025 91.452 1.00 53.30 C
ATOM 7 C4' U B1111 -46.385 20.999 90.731 1.00 53.11 C
ATOM 8 O4' U B1111 -44.991 20.647 90.932 1.00 52.85 O
ATOM 9 C3' U B1111 -46.515 21.049 89.225 1.00 53.03 C
ATOM 10 O3' U B1111 -47.680 21.706 88.767 1.00 53.27 O
ATOM 11 C2' U B1111 -45.209 21.725 88.832 1.00 52.80 C
ATOM 12 O2' U B1111 -45.224 23.119 89.124 1.00 52.90 O
ATOM 13 C1' U B1111 -44.236 21.046 89.798 1.00 52.66 C
ATOM 14 N1 U B1111 -43.625 19.853 89.149 1.00 52.46 N
ATOM 15 C2 U B1111 -42.530 20.126 88.309 1.00 52.25 C
ATOM 16 O2 U B1111 -42.033 21.222 88.143 1.00 52.21 O
ATOM 17 N3 U B1111 -42.033 19.063 87.647 1.00 52.10 N
ATOM 18 C4 U B1111 -42.544 17.816 87.741 1.00 52.14 C
ATOM 19 O4 U B1111 -41.997 16.987 87.075 1.00 52.00 O
ATOM 20 C5 U B1111 -43.673 17.582 88.579 1.00 52.36 C
ATOM 21 C6 U B1111 -44.193 18.599 89.234 1.00 52.52 C
ATOM 22 P G B1112 -48.802 20.862 87.957 1.00 58.15 P
ATOM 23 OP1 G B1112 -50.035 21.706 87.830 1.00 58.47 O
ATOM 24 OP2 G B1112 -48.919 19.548 88.617 1.00 58.14 O
ATOM 25 O5' G B1112 -48.131 20.681 86.530 1.00 57.93 O
TER
Atoms:
OP1: (-32.192,21.923,80.163)
OP2: (-33.598,20.137,81.365)
C3': (-34.721,24.644,83.680)
C1': (-37.026,24.575,83.183)
C5': (-33.988,23.955,81.334)
O6: (-40.010,20.013,85.786)
O4': (-36.300,24.349,81.998)
C8: (-37.262,22.029,83.192)
C2: (-40.062,23.545,86.110)
C6: (-39.707,21.202,85.568)
C5: (-38.773,21.720,84.655)
C4: (-38.582,23.085,84.579)
P: (-33.495,21.476,80.721)
C4': (-34.912,24.774,82.190)
C2': (-36.041,25.170,84.200)
O2': (-36.049,26.575,84.062)
N1: (-40.324,22.221,86.263)
N2: (-40.750,24.395,86.858)
N3: (-39.202,24.056,85.273)
N7: (-37.938,21.066,83.772)
N9: (-37.587,23.290,83.637)
O5': (-34.053,22.591,81.693)
O3': (-33.616,25.376,84.146)
OP2: (-33.598,20.137,81.365)
C3': (-34.721,24.644,83.680)
C1': (-37.026,24.575,83.183)
C5': (-33.988,23.955,81.334)
O6: (-40.010,20.013,85.786)
O4': (-36.300,24.349,81.998)
C8: (-37.262,22.029,83.192)
C2: (-40.062,23.545,86.110)
C6: (-39.707,21.202,85.568)
C5: (-38.773,21.720,84.655)
C4: (-38.582,23.085,84.579)
P: (-33.495,21.476,80.721)
C4': (-34.912,24.774,82.190)
C2': (-36.041,25.170,84.200)
O2': (-36.049,26.575,84.062)
N1: (-40.324,22.221,86.263)
N2: (-40.750,24.395,86.858)
N3: (-39.202,24.056,85.273)
N7: (-37.938,21.066,83.772)
N9: (-37.587,23.290,83.637)
O5': (-34.053,22.591,81.693)
O3': (-33.616,25.376,84.146)
C4: (-42.544,17.816,87.741)
N3: (-42.033,19.063,87.647)
OP1: (-48.958,17.737,92.399)
OP2: (-47.199,16.186,91.400)
C2: (-42.530,20.126,88.309)
C1': (-44.236,21.046,89.798)
C3': (-46.515,21.049,89.225)
O5': (-47.023,18.683,91.075)
O4': (-44.991,20.647,90.932)
C5': (-47.270,20.025,91.452)
P: (-47.548,17.493,91.991)
C4': (-46.385,20.999,90.731)
C2': (-45.209,21.725,88.832)
O2': (-45.224,23.119,89.124)
N1: (-43.625,19.853,89.149)
O4: (-41.997,16.987,87.075)
O2: (-42.033,21.222,88.143)
C6: (-44.193,18.599,89.234)
C5: (-43.673,17.582,88.579)
O3': (-47.680,21.706,88.767)
N3: (-42.033,19.063,87.647)
OP1: (-48.958,17.737,92.399)
OP2: (-47.199,16.186,91.400)
C2: (-42.530,20.126,88.309)
C1': (-44.236,21.046,89.798)
C3': (-46.515,21.049,89.225)
O5': (-47.023,18.683,91.075)
O4': (-44.991,20.647,90.932)
C5': (-47.270,20.025,91.452)
P: (-47.548,17.493,91.991)
C4': (-46.385,20.999,90.731)
C2': (-45.209,21.725,88.832)
O2': (-45.224,23.119,89.124)
N1: (-43.625,19.853,89.149)
O4: (-41.997,16.987,87.075)
O2: (-42.033,21.222,88.143)
C6: (-44.193,18.599,89.234)
C5: (-43.673,17.582,88.579)
O3': (-47.680,21.706,88.767)
Image (generated by PyMOL):