ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3D0U:A110:A136

Extra

PDB:
ATOM 1 O3' U A 109 16.502 47.796 21.400 1.00 34.04 O
ATOM 2 P G A 110 17.460 48.503 22.459 1.00 36.82 P
ATOM 3 OP1 G A 110 16.695 48.532 23.722 1.00 36.56 O
ATOM 4 OP2 G A 110 17.968 49.759 21.866 1.00 39.90 O
ATOM 5 O5' G A 110 18.709 47.520 22.614 1.00 32.84 O
ATOM 6 C5' G A 110 19.731 47.561 21.640 1.00 33.45 C
ATOM 7 C4' G A 110 20.713 46.425 21.848 1.00 33.76 C
ATOM 8 O4' G A 110 21.372 46.560 23.129 1.00 34.99 O
ATOM 9 C3' G A 110 20.069 45.060 21.933 1.00 32.85 C
ATOM 10 O3' G A 110 19.835 44.573 20.637 1.00 31.92 O
ATOM 11 C2' G A 110 21.151 44.267 22.654 1.00 33.77 C
ATOM 12 O2' G A 110 22.233 43.926 21.815 1.00 34.33 O
ATOM 13 C1' G A 110 21.598 45.284 23.693 1.00 33.40 C
ATOM 14 N9 G A 110 20.827 45.186 24.925 1.00 34.53 N
ATOM 15 C8 G A 110 19.946 46.105 25.433 1.00 34.15 C
ATOM 16 N7 G A 110 19.402 45.734 26.558 1.00 35.01 N
ATOM 17 C5 G A 110 19.956 44.486 26.808 1.00 36.40 C
ATOM 18 C6 G A 110 19.745 43.588 27.882 1.00 37.33 C
ATOM 19 O6 G A 110 19.003 43.715 28.865 1.00 38.59 O
ATOM 20 N1 G A 110 20.506 42.435 27.742 1.00 36.36 N
ATOM 21 C2 G A 110 21.359 42.181 26.700 1.00 36.12 C
ATOM 22 N2 G A 110 22.007 41.009 26.744 1.00 39.14 N
ATOM 23 N3 G A 110 21.570 43.009 25.688 1.00 35.05 N
ATOM 24 C4 G A 110 20.835 44.136 25.810 1.00 35.38 C
ATOM 25 P G A 111 18.601 43.586 20.416 1.00 33.93 P
ATOM 26 OP1 G A 111 18.586 43.241 18.975 1.00 32.00 O
ATOM 27 OP2 G A 111 17.390 44.138 21.070 1.00 29.16 O
ATOM 28 O5' G A 111 19.064 42.309 21.260 1.00 31.79 O
TER

ATOM 1 O3' C B 135 17.506 36.941 36.051 1.00 45.07 O
ATOM 2 P U B 136 18.769 37.791 36.553 1.00 47.54 P
ATOM 3 OP1 U B 136 19.515 37.001 37.562 1.00 42.31 O
ATOM 4 OP2 U B 136 18.272 39.155 36.840 1.00 45.56 O
ATOM 5 O5' U B 136 19.687 37.877 35.257 1.00 42.56 O
ATOM 6 C5' U B 136 20.040 36.675 34.617 1.00 40.52 C
ATOM 7 C4' U B 136 20.645 37.001 33.274 1.00 40.59 C
ATOM 8 O4' U B 136 19.623 37.536 32.404 1.00 39.37 O
ATOM 9 C3' U B 136 21.693 38.096 33.301 1.00 39.92 C
ATOM 10 O3' U B 136 22.932 37.552 33.725 1.00 39.26 O
ATOM 11 C2' U B 136 21.713 38.421 31.817 1.00 39.95 C
ATOM 12 O2' U B 136 22.376 37.395 31.100 1.00 38.82 O
ATOM 13 C1' U B 136 20.219 38.430 31.494 1.00 37.24 C
ATOM 14 N1 U B 136 19.535 39.742 31.674 1.00 39.48 N
ATOM 15 C2 U B 136 19.652 40.714 30.701 1.00 40.74 C
ATOM 16 O2 U B 136 20.308 40.556 29.685 1.00 40.83 O
ATOM 17 N3 U B 136 18.980 41.886 30.961 1.00 40.06 N
ATOM 18 C4 U B 136 18.210 42.184 32.072 1.00 41.77 C
ATOM 19 O4 U B 136 17.663 43.284 32.169 1.00 41.42 O
ATOM 20 C5 U B 136 18.134 41.117 33.038 1.00 41.38 C
ATOM 21 C6 U B 136 18.783 39.967 32.809 1.00 40.91 C
ATOM 22 P G B 137 24.004 38.467 34.474 1.00 38.52 P
ATOM 23 OP1 G B 137 25.057 37.596 35.036 1.00 36.03 O
ATOM 24 OP2 G B 137 23.248 39.396 35.341 1.00 40.49 O
ATOM 25 O5' G B 137 24.678 39.310 33.296 1.00 40.31 O
TER

Atoms:
OP1: (16.695,48.532,23.722)
OP2: (17.968,49.759,21.866)
C3': (20.069,45.060,21.933)
C1': (21.598,45.284,23.693)
C5': (19.731,47.561,21.640)
O6: (19.003,43.715,28.865)
O4': (21.372,46.560,23.129)
C8: (19.946,46.105,25.433)
C2: (21.359,42.181,26.700)
C6: (19.745,43.588,27.882)
C5: (19.956,44.486,26.808)
C4: (20.835,44.136,25.810)
P: (17.460,48.503,22.459)
C4': (20.713,46.425,21.848)
C2': (21.151,44.267,22.654)
O2': (22.233,43.926,21.815)
N1: (20.506,42.435,27.742)
N2: (22.007,41.009,26.744)
N3: (21.570,43.009,25.688)
N7: (19.402,45.734,26.558)
N9: (20.827,45.186,24.925)
O5': (18.709,47.520,22.614)
O3': (19.835,44.573,20.637)
C4: (18.210,42.184,32.072)
N3: (18.980,41.886,30.961)
OP1: (19.515,37.001,37.562)
OP2: (18.272,39.155,36.840)
C2: (19.652,40.714,30.701)
C1': (20.219,38.430,31.494)
C3': (21.693,38.096,33.301)
O5': (19.687,37.877,35.257)
O4': (19.623,37.536,32.404)
C5': (20.040,36.675,34.617)
P: (18.769,37.791,36.553)
C4': (20.645,37.001,33.274)
C2': (21.713,38.421,31.817)
O2': (22.376,37.395,31.100)
N1: (19.535,39.742,31.674)
O4: (17.663,43.284,32.169)
O2: (20.308,40.556,29.685)
C6: (18.783,39.967,32.809)
C5: (18.134,41.117,33.038)
O3': (22.932,37.552,33.725)
Image (generated by PyMOL):
PyMOL image
show in jmol