Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01856:01897
Extra
PDB:
ATOM 1 O3' U A1855 106.069 103.465 76.810 1.00 54.25 O
ATOM 2 P G A1856 106.878 103.567 75.431 1.00 55.24 P
ATOM 3 OP1 G A1856 105.918 103.460 74.297 1.00 53.20 O
ATOM 4 OP2 G A1856 108.022 102.624 75.519 1.00 56.19 O
ATOM 5 O5' G A1856 107.450 105.049 75.455 1.00 54.78 O
ATOM 6 C5' G A1856 106.545 106.156 75.459 1.00 57.27 C
ATOM 7 C4' G A1856 107.291 107.462 75.489 1.00 56.83 C
ATOM 8 O4' G A1856 107.994 107.609 76.746 1.00 57.57 O
ATOM 9 C3' G A1856 108.370 107.670 74.450 1.00 55.66 C
ATOM 10 O3' G A1856 107.813 108.001 73.185 1.00 54.20 O
ATOM 11 C2' G A1856 109.149 108.820 75.075 1.00 57.78 C
ATOM 12 O2' G A1856 108.462 110.051 74.993 1.00 56.45 O
ATOM 13 C1' G A1856 109.140 108.417 76.550 1.00 58.89 C
ATOM 14 N9 G A1856 110.321 107.658 76.956 1.00 61.25 N
ATOM 15 C8 G A1856 110.422 106.294 77.090 1.00 61.74 C
ATOM 16 N7 G A1856 111.605 105.905 77.479 1.00 63.19 N
ATOM 17 C5 G A1856 112.332 107.080 77.605 1.00 62.80 C
ATOM 18 C6 G A1856 113.676 107.284 77.990 1.00 63.47 C
ATOM 19 O6 G A1856 114.528 106.436 78.278 1.00 63.40 O
ATOM 20 N1 G A1856 114.004 108.636 78.011 1.00 63.75 N
ATOM 21 C2 G A1856 113.152 109.660 77.685 1.00 62.72 C
ATOM 22 N2 G A1856 113.655 110.901 77.788 1.00 61.52 N
ATOM 23 N3 G A1856 111.901 109.481 77.296 1.00 62.21 N
ATOM 24 C4 G A1856 111.557 108.173 77.287 1.00 61.89 C
ATOM 25 P C A1857 108.585 107.575 71.845 1.00 53.84 P
ATOM 26 OP1 C A1857 107.768 107.952 70.673 1.00 55.34 O
ATOM 27 OP2 C A1857 109.039 106.177 72.001 1.00 54.03 O
ATOM 28 O5' C A1857 109.866 108.514 71.833 1.00 55.25 O
TER
ATOM 1 O3' G B1896 124.574 108.016 79.117 1.00 62.06 O
ATOM 2 P U B1897 124.125 108.296 80.633 1.00 62.85 P
ATOM 3 OP1 U B1897 125.147 109.157 81.293 1.00 63.66 O
ATOM 4 OP2 U B1897 123.757 106.991 81.246 1.00 62.38 O
ATOM 5 O5' U B1897 122.814 109.179 80.463 1.00 64.35 O
ATOM 6 C5' U B1897 122.902 110.488 79.872 1.00 63.17 C
ATOM 7 C4' U B1897 121.527 111.020 79.550 1.00 60.71 C
ATOM 8 O4' U B1897 120.865 110.147 78.603 1.00 60.53 O
ATOM 9 C3' U B1897 120.538 111.101 80.696 1.00 58.19 C
ATOM 10 O3' U B1897 120.758 112.254 81.474 1.00 56.05 O
ATOM 11 C2' U B1897 119.227 111.210 79.947 1.00 58.86 C
ATOM 12 O2' U B1897 119.093 112.501 79.390 1.00 59.83 O
ATOM 13 C1' U B1897 119.464 110.219 78.808 1.00 60.15 C
ATOM 14 N1 U B1897 118.951 108.865 79.068 1.00 61.11 N
ATOM 15 C2 U B1897 117.689 108.563 78.593 1.00 61.39 C
ATOM 16 O2 U B1897 116.990 109.375 78.013 1.00 63.31 O
ATOM 17 N3 U B1897 117.274 107.277 78.819 1.00 60.92 N
ATOM 18 C4 U B1897 117.970 106.283 79.460 1.00 60.55 C
ATOM 19 O4 U B1897 117.470 105.162 79.554 1.00 60.37 O
ATOM 20 C5 U B1897 119.258 106.675 79.946 1.00 60.96 C
ATOM 21 C6 U B1897 119.694 107.921 79.741 1.00 60.68 C
ATOM 22 P C B1898 120.394 112.228 83.026 1.00 55.30 P
ATOM 23 OP1 C B1898 120.946 113.465 83.638 1.00 56.62 O
ATOM 24 OP2 C B1898 120.780 110.897 83.566 1.00 54.91 O
ATOM 25 O5' C B1898 118.808 112.313 83.045 1.00 57.06 O
TER
ATOM 2 P G A1856 106.878 103.567 75.431 1.00 55.24 P
ATOM 3 OP1 G A1856 105.918 103.460 74.297 1.00 53.20 O
ATOM 4 OP2 G A1856 108.022 102.624 75.519 1.00 56.19 O
ATOM 5 O5' G A1856 107.450 105.049 75.455 1.00 54.78 O
ATOM 6 C5' G A1856 106.545 106.156 75.459 1.00 57.27 C
ATOM 7 C4' G A1856 107.291 107.462 75.489 1.00 56.83 C
ATOM 8 O4' G A1856 107.994 107.609 76.746 1.00 57.57 O
ATOM 9 C3' G A1856 108.370 107.670 74.450 1.00 55.66 C
ATOM 10 O3' G A1856 107.813 108.001 73.185 1.00 54.20 O
ATOM 11 C2' G A1856 109.149 108.820 75.075 1.00 57.78 C
ATOM 12 O2' G A1856 108.462 110.051 74.993 1.00 56.45 O
ATOM 13 C1' G A1856 109.140 108.417 76.550 1.00 58.89 C
ATOM 14 N9 G A1856 110.321 107.658 76.956 1.00 61.25 N
ATOM 15 C8 G A1856 110.422 106.294 77.090 1.00 61.74 C
ATOM 16 N7 G A1856 111.605 105.905 77.479 1.00 63.19 N
ATOM 17 C5 G A1856 112.332 107.080 77.605 1.00 62.80 C
ATOM 18 C6 G A1856 113.676 107.284 77.990 1.00 63.47 C
ATOM 19 O6 G A1856 114.528 106.436 78.278 1.00 63.40 O
ATOM 20 N1 G A1856 114.004 108.636 78.011 1.00 63.75 N
ATOM 21 C2 G A1856 113.152 109.660 77.685 1.00 62.72 C
ATOM 22 N2 G A1856 113.655 110.901 77.788 1.00 61.52 N
ATOM 23 N3 G A1856 111.901 109.481 77.296 1.00 62.21 N
ATOM 24 C4 G A1856 111.557 108.173 77.287 1.00 61.89 C
ATOM 25 P C A1857 108.585 107.575 71.845 1.00 53.84 P
ATOM 26 OP1 C A1857 107.768 107.952 70.673 1.00 55.34 O
ATOM 27 OP2 C A1857 109.039 106.177 72.001 1.00 54.03 O
ATOM 28 O5' C A1857 109.866 108.514 71.833 1.00 55.25 O
TER
ATOM 1 O3' G B1896 124.574 108.016 79.117 1.00 62.06 O
ATOM 2 P U B1897 124.125 108.296 80.633 1.00 62.85 P
ATOM 3 OP1 U B1897 125.147 109.157 81.293 1.00 63.66 O
ATOM 4 OP2 U B1897 123.757 106.991 81.246 1.00 62.38 O
ATOM 5 O5' U B1897 122.814 109.179 80.463 1.00 64.35 O
ATOM 6 C5' U B1897 122.902 110.488 79.872 1.00 63.17 C
ATOM 7 C4' U B1897 121.527 111.020 79.550 1.00 60.71 C
ATOM 8 O4' U B1897 120.865 110.147 78.603 1.00 60.53 O
ATOM 9 C3' U B1897 120.538 111.101 80.696 1.00 58.19 C
ATOM 10 O3' U B1897 120.758 112.254 81.474 1.00 56.05 O
ATOM 11 C2' U B1897 119.227 111.210 79.947 1.00 58.86 C
ATOM 12 O2' U B1897 119.093 112.501 79.390 1.00 59.83 O
ATOM 13 C1' U B1897 119.464 110.219 78.808 1.00 60.15 C
ATOM 14 N1 U B1897 118.951 108.865 79.068 1.00 61.11 N
ATOM 15 C2 U B1897 117.689 108.563 78.593 1.00 61.39 C
ATOM 16 O2 U B1897 116.990 109.375 78.013 1.00 63.31 O
ATOM 17 N3 U B1897 117.274 107.277 78.819 1.00 60.92 N
ATOM 18 C4 U B1897 117.970 106.283 79.460 1.00 60.55 C
ATOM 19 O4 U B1897 117.470 105.162 79.554 1.00 60.37 O
ATOM 20 C5 U B1897 119.258 106.675 79.946 1.00 60.96 C
ATOM 21 C6 U B1897 119.694 107.921 79.741 1.00 60.68 C
ATOM 22 P C B1898 120.394 112.228 83.026 1.00 55.30 P
ATOM 23 OP1 C B1898 120.946 113.465 83.638 1.00 56.62 O
ATOM 24 OP2 C B1898 120.780 110.897 83.566 1.00 54.91 O
ATOM 25 O5' C B1898 118.808 112.313 83.045 1.00 57.06 O
TER
Atoms:
OP1: (105.918,103.460,74.297)
OP2: (108.022,102.624,75.519)
C3': (108.370,107.670,74.450)
C1': (109.140,108.417,76.550)
C5': (106.545,106.156,75.459)
O6: (114.528,106.436,78.278)
O4': (107.994,107.609,76.746)
C8: (110.422,106.294,77.090)
C2: (113.152,109.660,77.685)
C6: (113.676,107.284,77.990)
C5: (112.332,107.080,77.605)
C4: (111.557,108.173,77.287)
P: (106.878,103.567,75.431)
C4': (107.291,107.462,75.489)
C2': (109.149,108.820,75.075)
O2': (108.462,110.051,74.993)
N1: (114.004,108.636,78.011)
N2: (113.655,110.901,77.788)
N3: (111.901,109.481,77.296)
N7: (111.605,105.905,77.479)
N9: (110.321,107.658,76.956)
O5': (107.450,105.049,75.455)
O3': (107.813,108.001,73.185)
OP2: (108.022,102.624,75.519)
C3': (108.370,107.670,74.450)
C1': (109.140,108.417,76.550)
C5': (106.545,106.156,75.459)
O6: (114.528,106.436,78.278)
O4': (107.994,107.609,76.746)
C8: (110.422,106.294,77.090)
C2: (113.152,109.660,77.685)
C6: (113.676,107.284,77.990)
C5: (112.332,107.080,77.605)
C4: (111.557,108.173,77.287)
P: (106.878,103.567,75.431)
C4': (107.291,107.462,75.489)
C2': (109.149,108.820,75.075)
O2': (108.462,110.051,74.993)
N1: (114.004,108.636,78.011)
N2: (113.655,110.901,77.788)
N3: (111.901,109.481,77.296)
N7: (111.605,105.905,77.479)
N9: (110.321,107.658,76.956)
O5': (107.450,105.049,75.455)
O3': (107.813,108.001,73.185)
C4: (117.970,106.283,79.460)
N3: (117.274,107.277,78.819)
OP1: (125.147,109.157,81.293)
OP2: (123.757,106.991,81.246)
C2: (117.689,108.563,78.593)
C1': (119.464,110.219,78.808)
C3': (120.538,111.101,80.696)
O5': (122.814,109.179,80.463)
O4': (120.865,110.147,78.603)
C5': (122.902,110.488,79.872)
P: (124.125,108.296,80.633)
C4': (121.527,111.020,79.550)
C2': (119.227,111.210,79.947)
O2': (119.093,112.501,79.390)
N1: (118.951,108.865,79.068)
O4: (117.470,105.162,79.554)
O2: (116.990,109.375,78.013)
C6: (119.694,107.921,79.741)
C5: (119.258,106.675,79.946)
O3': (120.758,112.254,81.474)
N3: (117.274,107.277,78.819)
OP1: (125.147,109.157,81.293)
OP2: (123.757,106.991,81.246)
C2: (117.689,108.563,78.593)
C1': (119.464,110.219,78.808)
C3': (120.538,111.101,80.696)
O5': (122.814,109.179,80.463)
O4': (120.865,110.147,78.603)
C5': (122.902,110.488,79.872)
P: (124.125,108.296,80.633)
C4': (121.527,111.020,79.550)
C2': (119.227,111.210,79.947)
O2': (119.093,112.501,79.390)
N1: (118.951,108.865,79.068)
O4: (117.470,105.162,79.554)
O2: (116.990,109.375,78.013)
C6: (119.694,107.921,79.741)
C5: (119.258,106.675,79.946)
O3': (120.758,112.254,81.474)
Image (generated by PyMOL):