ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FJG:A1207:A922

Extra

PDB:
ATOM 1 O3' C A1206 227.612 110.898 -6.136 1.00 48.69 O
ATOM 2 P G A1207 228.371 112.287 -6.332 1.00 50.97 P
ATOM 3 OP1 G A1207 227.990 112.839 -7.660 1.00 49.63 O
ATOM 4 OP2 G A1207 229.803 112.076 -5.991 1.00 49.63 O
ATOM 5 O5' G A1207 227.765 113.213 -5.199 1.00 50.97 O
ATOM 6 C5' G A1207 226.378 113.513 -5.181 1.00 50.97 C
ATOM 7 C4' G A1207 226.045 114.351 -3.976 1.00 50.97 C
ATOM 8 O4' G A1207 226.265 113.590 -2.763 1.00 50.97 O
ATOM 9 C3' G A1207 226.881 115.597 -3.775 1.00 50.97 C
ATOM 10 O3' G A1207 226.469 116.664 -4.584 1.00 50.97 O
ATOM 11 C2' G A1207 226.678 115.878 -2.301 1.00 50.97 C
ATOM 12 O2' G A1207 225.415 116.450 -2.047 1.00 50.97 O
ATOM 13 C1' G A1207 226.687 114.465 -1.732 1.00 50.97 C
ATOM 14 N9 G A1207 228.031 114.079 -1.319 1.00 49.63 N
ATOM 15 C8 G A1207 228.833 113.121 -1.878 1.00 49.63 C
ATOM 16 N7 G A1207 229.979 112.999 -1.273 1.00 49.63 N
ATOM 17 C5 G A1207 229.933 113.938 -0.258 1.00 49.63 C
ATOM 18 C6 G A1207 230.886 114.264 0.730 1.00 49.63 C
ATOM 19 O6 G A1207 232.004 113.770 0.917 1.00 49.63 O
ATOM 20 N1 G A1207 230.427 115.276 1.558 1.00 49.63 N
ATOM 21 C2 G A1207 229.206 115.896 1.450 1.00 49.63 C
ATOM 22 N2 G A1207 228.940 116.861 2.338 1.00 49.63 N
ATOM 23 N3 G A1207 228.312 115.596 0.539 1.00 49.63 N
ATOM 24 C4 G A1207 228.738 114.615 -0.277 1.00 49.63 C
ATOM 25 P U A1208 227.575 117.677 -5.146 1.00 38.24 P
ATOM 26 OP1 U A1208 226.973 118.593 -6.170 1.00 55.53 O
ATOM 27 OP2 U A1208 228.762 116.867 -5.499 1.00 55.53 O
ATOM 28 O5' U A1208 227.934 118.533 -3.862 1.00 38.24 O
TER

ATOM 1 O3' A B 921 238.576 116.941 7.875 1.00 45.67 O
ATOM 2 P U B 922 237.799 115.760 8.630 1.00 52.36 P
ATOM 3 OP1 U B 922 237.994 115.948 10.090 1.00 48.50 O
ATOM 4 OP2 U B 922 238.206 114.477 8.000 1.00 48.50 O
ATOM 5 O5' U B 922 236.270 116.016 8.263 1.00 52.36 O
ATOM 6 C5' U B 922 235.652 117.270 8.573 1.00 52.36 C
ATOM 7 C4' U B 922 234.388 117.466 7.767 1.00 52.36 C
ATOM 8 O4' U B 922 234.700 117.531 6.353 1.00 52.36 O
ATOM 9 C3' U B 922 233.311 116.397 7.837 1.00 52.36 C
ATOM 10 O3' U B 922 232.515 116.456 9.000 1.00 52.36 O
ATOM 11 C2' U B 922 232.495 116.703 6.595 1.00 52.36 C
ATOM 12 O2' U B 922 231.679 117.846 6.777 1.00 52.36 O
ATOM 13 C1' U B 922 233.598 117.045 5.598 1.00 52.36 C
ATOM 14 N1 U B 922 234.007 115.848 4.837 1.00 48.50 N
ATOM 15 C2 U B 922 233.215 115.475 3.765 1.00 48.50 C
ATOM 16 O2 U B 922 232.240 116.112 3.413 1.00 48.50 O
ATOM 17 N3 U B 922 233.604 114.334 3.119 1.00 48.50 N
ATOM 18 C4 U B 922 234.682 113.542 3.417 1.00 48.50 C
ATOM 19 O4 U B 922 234.878 112.509 2.766 1.00 48.50 O
ATOM 20 C5 U B 922 235.466 114.000 4.522 1.00 48.50 C
ATOM 21 C6 U B 922 235.111 115.111 5.177 1.00 48.50 C
ATOM 22 P G B 923 232.000 115.085 9.657 1.00 53.01 P
ATOM 23 OP1 G B 923 231.707 115.368 11.081 1.00 52.32 O
ATOM 24 OP2 G B 923 232.946 113.993 9.317 1.00 52.32 O
ATOM 25 O5' G B 923 230.632 114.812 8.889 1.00 53.01 O
TER

Atoms:
OP1: (227.990,112.839,-7.660)
OP2: (229.803,112.076,-5.991)
C3': (226.881,115.597,-3.775)
C1': (226.687,114.465,-1.732)
C5': (226.378,113.513,-5.181)
O6: (232.004,113.770,0.917)
O4': (226.265,113.590,-2.763)
C8: (228.833,113.121,-1.878)
C2: (229.206,115.896,1.450)
C6: (230.886,114.264,0.730)
C5: (229.933,113.938,-0.258)
C4: (228.738,114.615,-0.277)
P: (228.371,112.287,-6.332)
C4': (226.045,114.351,-3.976)
C2': (226.678,115.878,-2.301)
O2': (225.415,116.450,-2.047)
N1: (230.427,115.276,1.558)
N2: (228.940,116.861,2.338)
N3: (228.312,115.596,0.539)
N7: (229.979,112.999,-1.273)
N9: (228.031,114.079,-1.319)
O5': (227.765,113.213,-5.199)
O3': (226.469,116.664,-4.584)
C4: (234.682,113.542,3.417)
N3: (233.604,114.334,3.119)
OP1: (237.994,115.948,10.090)
OP2: (238.206,114.477,8.000)
C2: (233.215,115.475,3.765)
C1': (233.598,117.045,5.598)
C3': (233.311,116.397,7.837)
O5': (236.270,116.016,8.263)
O4': (234.700,117.531,6.353)
C5': (235.652,117.270,8.573)
P: (237.799,115.760,8.630)
C4': (234.388,117.466,7.767)
C2': (232.495,116.703,6.595)
O2': (231.679,117.846,6.777)
N1: (234.007,115.848,4.837)
O4: (234.878,112.509,2.766)
O2: (232.240,116.112,3.413)
C6: (235.111,115.111,5.177)
C5: (235.466,114.000,4.522)
O3': (232.515,116.456,9.000)
Image (generated by PyMOL):
PyMOL image
show in jmol