ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:A16:A138

Extra

PDB:
ATOM 1 O3' A A 15 21.294 30.852 22.630 1.00 17.68 O
ATOM 2 P G A 16 22.241 32.131 22.559 1.00 19.33 P
ATOM 3 OP1 G A 16 23.612 31.591 22.385 1.00 19.20 O
ATOM 4 OP2 G A 16 21.919 32.985 23.733 1.00 17.99 O
ATOM 5 O5' G A 16 21.718 32.899 21.274 1.00 16.57 O
ATOM 6 C5' G A 16 21.808 32.310 19.990 1.00 18.33 C
ATOM 7 C4' G A 16 21.059 33.136 18.979 1.00 19.90 C
ATOM 8 O4' G A 16 19.659 33.217 19.341 1.00 17.28 O
ATOM 9 C3' G A 16 21.482 34.587 18.847 1.00 15.46 C
ATOM 10 O3' G A 16 22.643 34.730 18.054 1.00 18.29 O
ATOM 11 C2' G A 16 20.233 35.207 18.232 1.00 17.52 C
ATOM 12 O2' G A 16 20.111 34.846 16.870 1.00 17.51 O
ATOM 13 C1' G A 16 19.138 34.478 19.012 1.00 14.34 C
ATOM 14 N9 G A 16 18.885 35.228 20.251 1.00 15.78 N
ATOM 15 C8 G A 16 19.339 34.940 21.526 1.00 18.29 C
ATOM 16 N7 G A 16 18.956 35.838 22.414 1.00 17.52 N
ATOM 17 C5 G A 16 18.251 36.773 21.672 1.00 15.54 C
ATOM 18 C6 G A 16 17.627 37.972 22.075 1.00 16.65 C
ATOM 19 O6 G A 16 17.566 38.443 23.217 1.00 16.05 O
ATOM 20 N1 G A 16 17.003 38.620 21.012 1.00 16.76 N
ATOM 21 C2 G A 16 16.996 38.183 19.714 1.00 15.89 C
ATOM 22 N2 G A 16 16.340 38.959 18.818 1.00 15.61 N
ATOM 23 N3 G A 16 17.594 37.077 19.322 1.00 15.83 N
ATOM 24 C4 G A 16 18.197 36.417 20.337 1.00 15.62 C
ATOM 25 P G A 17 23.838 35.739 18.489 1.00 19.56 P
ATOM 26 OP1 G A 17 24.868 35.458 17.452 1.00 16.32 O
ATOM 27 OP2 G A 17 24.111 35.612 19.924 1.00 19.54 O
ATOM 28 O5' G A 17 23.234 37.186 18.253 1.00 17.77 O
TER

ATOM 1 O3' C B 137 14.144 47.230 26.084 1.00 22.02 O
ATOM 2 P U B 138 12.845 46.292 26.040 1.00 25.37 P
ATOM 3 OP1 U B 138 11.778 47.301 25.866 1.00 23.82 O
ATOM 4 OP2 U B 138 12.857 45.397 27.216 1.00 23.54 O
ATOM 5 O5' U B 138 12.966 45.445 24.703 1.00 21.86 O
ATOM 6 C5' U B 138 12.643 46.063 23.468 1.00 20.17 C
ATOM 7 C4' U B 138 13.075 45.190 22.326 1.00 17.50 C
ATOM 8 O4' U B 138 14.489 44.886 22.452 1.00 18.48 O
ATOM 9 C3' U B 138 12.423 43.817 22.301 1.00 15.90 C
ATOM 10 O3' U B 138 11.127 43.838 21.738 1.00 17.72 O
ATOM 11 C2' U B 138 13.414 42.984 21.513 1.00 18.34 C
ATOM 12 O2' U B 138 13.330 43.332 20.141 1.00 19.45 O
ATOM 13 C1' U B 138 14.725 43.551 22.049 1.00 17.93 C
ATOM 14 N1 U B 138 15.270 42.794 23.191 1.00 16.55 N
ATOM 15 C2 U B 138 15.885 41.606 22.882 1.00 16.37 C
ATOM 16 O2 U B 138 15.921 41.193 21.742 1.00 18.98 O
ATOM 17 N3 U B 138 16.432 40.928 23.932 1.00 17.14 N
ATOM 18 C4 U B 138 16.422 41.327 25.248 1.00 18.51 C
ATOM 19 O4 U B 138 16.953 40.607 26.090 1.00 17.22 O
ATOM 20 C5 U B 138 15.771 42.577 25.494 1.00 18.60 C
ATOM 21 C6 U B 138 15.245 43.267 24.477 1.00 19.94 C
ATOM 22 P A B 139 10.023 42.840 22.325 1.00 22.21 P
ATOM 23 OP1 A B 139 8.801 43.306 21.612 1.00 20.18 O
ATOM 24 OP2 A B 139 10.123 42.830 23.810 1.00 21.10 O
ATOM 25 O5' A B 139 10.438 41.404 21.813 1.00 20.81 O
TER

Atoms:
OP1: (23.612,31.591,22.385)
OP2: (21.919,32.985,23.733)
C3': (21.482,34.587,18.847)
C1': (19.138,34.478,19.012)
C5': (21.808,32.310,19.990)
O6: (17.566,38.443,23.217)
O4': (19.659,33.217,19.341)
C8: (19.339,34.940,21.526)
C2: (16.996,38.183,19.714)
C6: (17.627,37.972,22.075)
C5: (18.251,36.773,21.672)
C4: (18.197,36.417,20.337)
P: (22.241,32.131,22.559)
C4': (21.059,33.136,18.979)
C2': (20.233,35.207,18.232)
O2': (20.111,34.846,16.870)
N1: (17.003,38.620,21.012)
N2: (16.340,38.959,18.818)
N3: (17.594,37.077,19.322)
N7: (18.956,35.838,22.414)
N9: (18.885,35.228,20.251)
O5': (21.718,32.899,21.274)
O3': (22.643,34.730,18.054)
C4: (16.422,41.327,25.248)
N3: (16.432,40.928,23.932)
OP1: (11.778,47.301,25.866)
OP2: (12.857,45.397,27.216)
C2: (15.885,41.606,22.882)
C1': (14.725,43.551,22.049)
C3': (12.423,43.817,22.301)
O5': (12.966,45.445,24.703)
O4': (14.489,44.886,22.452)
C5': (12.643,46.063,23.468)
P: (12.845,46.292,26.040)
C4': (13.075,45.190,22.326)
C2': (13.414,42.984,21.513)
O2': (13.330,43.332,20.141)
N1: (15.270,42.794,23.191)
O4: (16.953,40.607,26.090)
O2: (15.921,41.193,21.742)
C6: (15.245,43.267,24.477)
C5: (15.771,42.577,25.494)
O3': (11.127,43.838,21.738)
Image (generated by PyMOL):
PyMOL image
show in jmol