ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2IZN:S3:S9

Extra

PDB:
ATOM 1 O3' C A 2 -77.278 -51.250 -43.414 0.40 56.26 O
ATOM 2 P G A 3 -77.943 -52.704 -43.582 0.40 55.25 P
ATOM 3 OP1 G A 3 -77.574 -53.223 -44.927 0.40 54.17 O
ATOM 4 OP2 G A 3 -79.375 -52.588 -43.209 0.40 54.45 O
ATOM 5 O5' G A 3 -77.231 -53.588 -42.459 0.40 54.29 O
ATOM 6 C5' G A 3 -75.891 -54.049 -42.617 0.40 53.19 C
ATOM 7 C4' G A 3 -75.407 -54.712 -41.344 0.40 53.44 C
ATOM 8 O4' G A 3 -75.385 -53.734 -40.265 0.40 53.62 O
ATOM 9 C3' G A 3 -76.276 -55.831 -40.787 0.40 53.74 C
ATOM 10 O3' G A 3 -76.103 -57.083 -41.450 0.40 54.33 O
ATOM 11 C2' G A 3 -75.841 -55.865 -39.328 0.40 54.03 C
ATOM 12 O2' G A 3 -74.600 -56.507 -39.120 0.40 53.57 O
ATOM 13 C1' G A 3 -75.697 -54.374 -39.031 0.40 54.15 C
ATOM 14 N9 G A 3 -76.951 -53.822 -38.522 0.40 55.50 N
ATOM 15 C8 G A 3 -77.904 -53.130 -39.234 0.40 56.11 C
ATOM 16 N7 G A 3 -78.936 -52.788 -38.511 0.40 56.36 N
ATOM 17 C5 G A 3 -78.647 -53.276 -37.244 0.40 56.72 C
ATOM 18 C6 G A 3 -79.398 -53.208 -36.040 0.40 57.30 C
ATOM 19 O6 G A 3 -80.504 -52.686 -35.848 0.40 58.22 O
ATOM 20 N1 G A 3 -78.735 -53.834 -34.987 0.40 56.51 N
ATOM 21 C2 G A 3 -77.511 -54.446 -35.079 0.40 56.39 C
ATOM 22 N2 G A 3 -77.044 -54.994 -33.951 0.40 56.31 N
ATOM 23 N3 G A 3 -76.799 -54.516 -36.195 0.40 56.44 N
ATOM 24 C4 G A 3 -77.423 -53.913 -37.231 0.40 56.17 C
ATOM 25 P A A 4 -77.271 -58.194 -41.371 0.40 54.63 P
ATOM 26 OP1 A A 4 -76.886 -59.365 -42.195 0.40 53.98 O
ATOM 27 OP2 A A 4 -78.558 -57.503 -41.643 0.40 54.77 O
ATOM 28 O5' A A 4 -77.280 -58.644 -39.839 0.40 55.49 O
TER

ATOM 1 O3' C B 8 -78.340 -53.587 -25.835 0.40 66.25 O
ATOM 2 P G B 9 -77.825 -52.059 -25.895 0.40 68.66 P
ATOM 3 OP1 G B 9 -76.953 -51.817 -24.710 0.40 67.36 O
ATOM 4 OP2 G B 9 -79.021 -51.195 -26.119 0.40 67.70 O
ATOM 5 O5' G B 9 -76.923 -51.999 -27.215 0.40 68.94 O
ATOM 6 C5' G B 9 -75.633 -52.609 -27.247 0.40 69.94 C
ATOM 7 C4' G B 9 -75.012 -52.499 -28.627 0.40 70.66 C
ATOM 8 O4' G B 9 -75.844 -53.191 -29.604 0.40 71.11 O
ATOM 9 C3' G B 9 -74.857 -51.111 -29.236 0.40 71.24 C
ATOM 10 O3' G B 9 -73.761 -50.358 -28.720 0.40 70.42 O
ATOM 11 C2' G B 9 -74.660 -51.450 -30.709 0.40 71.73 C
ATOM 12 O2' G B 9 -73.357 -51.916 -31.006 0.40 72.52 O
ATOM 13 C1' G B 9 -75.668 -52.588 -30.886 0.40 71.42 C
ATOM 14 N9 G B 9 -76.949 -52.068 -31.364 0.40 70.92 N
ATOM 15 C8 G B 9 -78.111 -51.906 -30.647 0.40 70.68 C
ATOM 16 N7 G B 9 -79.074 -51.366 -31.346 0.40 70.51 N
ATOM 17 C5 G B 9 -78.518 -51.167 -32.604 0.40 70.45 C
ATOM 18 C6 G B 9 -79.081 -50.604 -33.785 0.40 70.53 C
ATOM 19 O6 G B 9 -80.219 -50.153 -33.958 0.40 71.23 O
ATOM 20 N1 G B 9 -78.167 -50.593 -34.834 0.40 69.61 N
ATOM 21 C2 G B 9 -76.882 -51.064 -34.763 0.40 69.80 C
ATOM 22 N2 G B 9 -76.158 -50.968 -35.888 0.40 69.73 N
ATOM 23 N3 G B 9 -76.344 -51.588 -33.671 0.40 70.46 N
ATOM 24 C4 G B 9 -77.212 -51.607 -32.637 0.40 70.42 C
ATOM 25 P G B 10 -73.720 -48.758 -28.943 0.40 70.60 P
ATOM 26 OP1 G B 10 -72.534 -48.204 -28.233 0.40 70.02 O
ATOM 27 OP2 G B 10 -75.074 -48.226 -28.629 0.40 69.89 O
ATOM 28 O5' G B 10 -73.494 -48.584 -30.516 0.40 69.46 O
TER

Atoms:
OP1: (-77.574,-53.223,-44.927)
OP2: (-79.375,-52.588,-43.209)
C3': (-76.276,-55.831,-40.787)
C1': (-75.697,-54.374,-39.031)
C5': (-75.891,-54.049,-42.617)
O6: (-80.504,-52.686,-35.848)
O4': (-75.385,-53.734,-40.265)
C8: (-77.904,-53.130,-39.234)
C2: (-77.511,-54.446,-35.079)
C6: (-79.398,-53.208,-36.040)
C5: (-78.647,-53.276,-37.244)
C4: (-77.423,-53.913,-37.231)
P: (-77.943,-52.704,-43.582)
C4': (-75.407,-54.712,-41.344)
C2': (-75.841,-55.865,-39.328)
O2': (-74.600,-56.507,-39.120)
N1: (-78.735,-53.834,-34.987)
N2: (-77.044,-54.994,-33.951)
N3: (-76.799,-54.516,-36.195)
N7: (-78.936,-52.788,-38.511)
N9: (-76.951,-53.822,-38.522)
O5': (-77.231,-53.588,-42.459)
O3': (-76.103,-57.083,-41.450)
OP1: (-76.953,-51.817,-24.710)
OP2: (-79.021,-51.195,-26.119)
C3': (-74.857,-51.111,-29.236)
C1': (-75.668,-52.588,-30.886)
C5': (-75.633,-52.609,-27.247)
O6: (-80.219,-50.153,-33.958)
O4': (-75.844,-53.191,-29.604)
C8: (-78.111,-51.906,-30.647)
C2: (-76.882,-51.064,-34.763)
C6: (-79.081,-50.604,-33.785)
C5: (-78.518,-51.167,-32.604)
C4: (-77.212,-51.607,-32.637)
P: (-77.825,-52.059,-25.895)
C4': (-75.012,-52.499,-28.627)
C2': (-74.660,-51.450,-30.709)
O2': (-73.357,-51.916,-31.006)
N1: (-78.167,-50.593,-34.834)
N2: (-76.158,-50.968,-35.888)
N3: (-76.344,-51.588,-33.671)
N7: (-79.074,-51.366,-31.346)
N9: (-76.949,-52.068,-31.364)
O5': (-76.923,-51.999,-27.215)
O3': (-73.761,-50.358,-28.720)
Image (generated by PyMOL):
PyMOL image
show in jmol