Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:071:084
Extra
PDB:
ATOM 1 O3' A A 70 27.163 160.190 25.436 1.00 52.21 O
ATOM 2 P G A 71 26.320 159.895 26.762 1.00 54.44 P
ATOM 3 OP1 G A 71 25.067 159.174 26.406 1.00 53.94 O
ATOM 4 OP2 G A 71 26.251 161.169 27.528 1.00 52.51 O
ATOM 5 O5' G A 71 27.236 158.868 27.559 1.00 54.82 O
ATOM 6 C5' G A 71 28.332 159.324 28.373 1.00 52.16 C
ATOM 7 C4' G A 71 29.641 159.022 27.688 1.00 49.77 C
ATOM 8 O4' G A 71 29.750 159.823 26.476 1.00 48.74 O
ATOM 9 C3' G A 71 30.889 159.375 28.475 1.00 48.24 C
ATOM 10 O3' G A 71 31.228 158.372 29.419 1.00 47.84 O
ATOM 11 C2' G A 71 31.906 159.542 27.361 1.00 47.68 C
ATOM 12 O2' G A 71 32.266 158.302 26.786 1.00 46.38 O
ATOM 13 C1' G A 71 31.070 160.337 26.359 1.00 47.98 C
ATOM 14 N9 G A 71 31.041 161.747 26.744 1.00 46.86 N
ATOM 15 C8 G A 71 29.958 162.466 27.190 1.00 46.02 C
ATOM 16 N7 G A 71 30.256 163.693 27.514 1.00 45.13 N
ATOM 17 C5 G A 71 31.615 163.796 27.260 1.00 46.65 C
ATOM 18 C6 G A 71 32.505 164.894 27.432 1.00 48.18 C
ATOM 19 O6 G A 71 32.258 166.026 27.877 1.00 51.01 O
ATOM 20 N1 G A 71 33.800 164.571 27.033 1.00 47.04 N
ATOM 21 C2 G A 71 34.192 163.350 26.543 1.00 47.75 C
ATOM 22 N2 G A 71 35.482 163.234 26.210 1.00 47.59 N
ATOM 23 N3 G A 71 33.376 162.317 26.390 1.00 47.65 N
ATOM 24 C4 G A 71 32.112 162.610 26.766 1.00 46.89 C
ATOM 25 P C A 72 31.692 158.801 30.895 1.00 46.68 P
ATOM 26 OP1 C A 72 31.522 157.629 31.793 1.00 46.39 O
ATOM 27 OP2 C A 72 31.011 160.079 31.219 1.00 44.48 O
ATOM 28 O5' C A 72 33.250 159.079 30.733 1.00 46.76 O
TER
ATOM 1 O3' C B 83 40.328 168.557 22.972 1.00 61.57 O
ATOM 2 P G B 84 39.281 168.795 21.779 1.00 61.37 P
ATOM 3 OP1 G B 84 40.024 168.671 20.496 1.00 62.28 O
ATOM 4 OP2 G B 84 38.501 170.028 22.063 1.00 61.60 O
ATOM 5 O5' G B 84 38.295 167.553 21.904 1.00 61.37 O
ATOM 6 C5' G B 84 38.741 166.224 21.592 1.00 58.16 C
ATOM 7 C4' G B 84 37.566 165.283 21.533 1.00 57.21 C
ATOM 8 O4' G B 84 36.967 165.174 22.848 1.00 55.54 O
ATOM 9 C3' G B 84 36.398 165.730 20.675 1.00 57.61 C
ATOM 10 O3' G B 84 36.633 165.515 19.293 1.00 61.57 O
ATOM 11 C2' G B 84 35.272 164.865 21.219 1.00 54.13 C
ATOM 12 O2' G B 84 35.344 163.531 20.775 1.00 52.51 O
ATOM 13 C1' G B 84 35.585 164.892 22.712 1.00 52.79 C
ATOM 14 N9 G B 84 34.820 165.915 23.412 1.00 51.50 N
ATOM 15 C8 G B 84 35.234 167.162 23.820 1.00 50.78 C
ATOM 16 N7 G B 84 34.292 167.841 24.420 1.00 50.65 N
ATOM 17 C5 G B 84 33.194 166.990 24.403 1.00 50.63 C
ATOM 18 C6 G B 84 31.871 167.172 24.901 1.00 51.39 C
ATOM 19 O6 G B 84 31.383 168.163 25.469 1.00 53.05 O
ATOM 20 N1 G B 84 31.083 166.043 24.677 1.00 51.92 N
ATOM 21 C2 G B 84 31.506 164.890 24.048 1.00 51.09 C
ATOM 22 N2 G B 84 30.604 163.898 23.928 1.00 49.93 N
ATOM 23 N3 G B 84 32.726 164.720 23.574 1.00 50.34 N
ATOM 24 C4 G B 84 33.509 165.799 23.787 1.00 50.94 C
ATOM 25 P A B 85 36.306 166.683 18.235 1.00 63.28 P
ATOM 26 OP1 A B 85 37.605 167.302 17.852 1.00 61.34 O
ATOM 27 OP2 A B 85 35.210 167.542 18.771 1.00 62.43 O
ATOM 28 O5' A B 85 35.707 165.883 16.995 1.00 63.92 O
TER
ATOM 2 P G A 71 26.320 159.895 26.762 1.00 54.44 P
ATOM 3 OP1 G A 71 25.067 159.174 26.406 1.00 53.94 O
ATOM 4 OP2 G A 71 26.251 161.169 27.528 1.00 52.51 O
ATOM 5 O5' G A 71 27.236 158.868 27.559 1.00 54.82 O
ATOM 6 C5' G A 71 28.332 159.324 28.373 1.00 52.16 C
ATOM 7 C4' G A 71 29.641 159.022 27.688 1.00 49.77 C
ATOM 8 O4' G A 71 29.750 159.823 26.476 1.00 48.74 O
ATOM 9 C3' G A 71 30.889 159.375 28.475 1.00 48.24 C
ATOM 10 O3' G A 71 31.228 158.372 29.419 1.00 47.84 O
ATOM 11 C2' G A 71 31.906 159.542 27.361 1.00 47.68 C
ATOM 12 O2' G A 71 32.266 158.302 26.786 1.00 46.38 O
ATOM 13 C1' G A 71 31.070 160.337 26.359 1.00 47.98 C
ATOM 14 N9 G A 71 31.041 161.747 26.744 1.00 46.86 N
ATOM 15 C8 G A 71 29.958 162.466 27.190 1.00 46.02 C
ATOM 16 N7 G A 71 30.256 163.693 27.514 1.00 45.13 N
ATOM 17 C5 G A 71 31.615 163.796 27.260 1.00 46.65 C
ATOM 18 C6 G A 71 32.505 164.894 27.432 1.00 48.18 C
ATOM 19 O6 G A 71 32.258 166.026 27.877 1.00 51.01 O
ATOM 20 N1 G A 71 33.800 164.571 27.033 1.00 47.04 N
ATOM 21 C2 G A 71 34.192 163.350 26.543 1.00 47.75 C
ATOM 22 N2 G A 71 35.482 163.234 26.210 1.00 47.59 N
ATOM 23 N3 G A 71 33.376 162.317 26.390 1.00 47.65 N
ATOM 24 C4 G A 71 32.112 162.610 26.766 1.00 46.89 C
ATOM 25 P C A 72 31.692 158.801 30.895 1.00 46.68 P
ATOM 26 OP1 C A 72 31.522 157.629 31.793 1.00 46.39 O
ATOM 27 OP2 C A 72 31.011 160.079 31.219 1.00 44.48 O
ATOM 28 O5' C A 72 33.250 159.079 30.733 1.00 46.76 O
TER
ATOM 1 O3' C B 83 40.328 168.557 22.972 1.00 61.57 O
ATOM 2 P G B 84 39.281 168.795 21.779 1.00 61.37 P
ATOM 3 OP1 G B 84 40.024 168.671 20.496 1.00 62.28 O
ATOM 4 OP2 G B 84 38.501 170.028 22.063 1.00 61.60 O
ATOM 5 O5' G B 84 38.295 167.553 21.904 1.00 61.37 O
ATOM 6 C5' G B 84 38.741 166.224 21.592 1.00 58.16 C
ATOM 7 C4' G B 84 37.566 165.283 21.533 1.00 57.21 C
ATOM 8 O4' G B 84 36.967 165.174 22.848 1.00 55.54 O
ATOM 9 C3' G B 84 36.398 165.730 20.675 1.00 57.61 C
ATOM 10 O3' G B 84 36.633 165.515 19.293 1.00 61.57 O
ATOM 11 C2' G B 84 35.272 164.865 21.219 1.00 54.13 C
ATOM 12 O2' G B 84 35.344 163.531 20.775 1.00 52.51 O
ATOM 13 C1' G B 84 35.585 164.892 22.712 1.00 52.79 C
ATOM 14 N9 G B 84 34.820 165.915 23.412 1.00 51.50 N
ATOM 15 C8 G B 84 35.234 167.162 23.820 1.00 50.78 C
ATOM 16 N7 G B 84 34.292 167.841 24.420 1.00 50.65 N
ATOM 17 C5 G B 84 33.194 166.990 24.403 1.00 50.63 C
ATOM 18 C6 G B 84 31.871 167.172 24.901 1.00 51.39 C
ATOM 19 O6 G B 84 31.383 168.163 25.469 1.00 53.05 O
ATOM 20 N1 G B 84 31.083 166.043 24.677 1.00 51.92 N
ATOM 21 C2 G B 84 31.506 164.890 24.048 1.00 51.09 C
ATOM 22 N2 G B 84 30.604 163.898 23.928 1.00 49.93 N
ATOM 23 N3 G B 84 32.726 164.720 23.574 1.00 50.34 N
ATOM 24 C4 G B 84 33.509 165.799 23.787 1.00 50.94 C
ATOM 25 P A B 85 36.306 166.683 18.235 1.00 63.28 P
ATOM 26 OP1 A B 85 37.605 167.302 17.852 1.00 61.34 O
ATOM 27 OP2 A B 85 35.210 167.542 18.771 1.00 62.43 O
ATOM 28 O5' A B 85 35.707 165.883 16.995 1.00 63.92 O
TER
Atoms:
OP1: (25.067,159.174,26.406)
OP2: (26.251,161.169,27.528)
C3': (30.889,159.375,28.475)
C1': (31.070,160.337,26.359)
C5': (28.332,159.324,28.373)
O6: (32.258,166.026,27.877)
O4': (29.750,159.823,26.476)
C8: (29.958,162.466,27.190)
C2: (34.192,163.350,26.543)
C6: (32.505,164.894,27.432)
C5: (31.615,163.796,27.260)
C4: (32.112,162.610,26.766)
P: (26.320,159.895,26.762)
C4': (29.641,159.022,27.688)
C2': (31.906,159.542,27.361)
O2': (32.266,158.302,26.786)
N1: (33.800,164.571,27.033)
N2: (35.482,163.234,26.210)
N3: (33.376,162.317,26.390)
N7: (30.256,163.693,27.514)
N9: (31.041,161.747,26.744)
O5': (27.236,158.868,27.559)
O3': (31.228,158.372,29.419)
OP2: (26.251,161.169,27.528)
C3': (30.889,159.375,28.475)
C1': (31.070,160.337,26.359)
C5': (28.332,159.324,28.373)
O6: (32.258,166.026,27.877)
O4': (29.750,159.823,26.476)
C8: (29.958,162.466,27.190)
C2: (34.192,163.350,26.543)
C6: (32.505,164.894,27.432)
C5: (31.615,163.796,27.260)
C4: (32.112,162.610,26.766)
P: (26.320,159.895,26.762)
C4': (29.641,159.022,27.688)
C2': (31.906,159.542,27.361)
O2': (32.266,158.302,26.786)
N1: (33.800,164.571,27.033)
N2: (35.482,163.234,26.210)
N3: (33.376,162.317,26.390)
N7: (30.256,163.693,27.514)
N9: (31.041,161.747,26.744)
O5': (27.236,158.868,27.559)
O3': (31.228,158.372,29.419)
OP1: (40.024,168.671,20.496)
OP2: (38.501,170.028,22.063)
C3': (36.398,165.730,20.675)
C1': (35.585,164.892,22.712)
C5': (38.741,166.224,21.592)
O6: (31.383,168.163,25.469)
O4': (36.967,165.174,22.848)
C8: (35.234,167.162,23.820)
C2: (31.506,164.890,24.048)
C6: (31.871,167.172,24.901)
C5: (33.194,166.990,24.403)
C4: (33.509,165.799,23.787)
P: (39.281,168.795,21.779)
C4': (37.566,165.283,21.533)
C2': (35.272,164.865,21.219)
O2': (35.344,163.531,20.775)
N1: (31.083,166.043,24.677)
N2: (30.604,163.898,23.928)
N3: (32.726,164.720,23.574)
N7: (34.292,167.841,24.420)
N9: (34.820,165.915,23.412)
O5': (38.295,167.553,21.904)
O3': (36.633,165.515,19.293)
OP2: (38.501,170.028,22.063)
C3': (36.398,165.730,20.675)
C1': (35.585,164.892,22.712)
C5': (38.741,166.224,21.592)
O6: (31.383,168.163,25.469)
O4': (36.967,165.174,22.848)
C8: (35.234,167.162,23.820)
C2: (31.506,164.890,24.048)
C6: (31.871,167.172,24.901)
C5: (33.194,166.990,24.403)
C4: (33.509,165.799,23.787)
P: (39.281,168.795,21.779)
C4': (37.566,165.283,21.533)
C2': (35.272,164.865,21.219)
O2': (35.344,163.531,20.775)
N1: (31.083,166.043,24.677)
N2: (30.604,163.898,23.928)
N3: (32.726,164.720,23.574)
N7: (34.292,167.841,24.420)
N9: (34.820,165.915,23.412)
O5': (38.295,167.553,21.904)
O3': (36.633,165.515,19.293)
Image (generated by PyMOL):