Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2G5Q:A19:B2
Extra
PDB:
ATOM 1 O3' C A 18 -9.598 -5.932 8.271 1.00 77.18 O
ATOM 2 P G A 19 -10.594 -7.159 8.571 1.00 75.89 P
ATOM 3 OP1 G A 19 -11.862 -6.865 7.865 1.00 80.06 O
ATOM 4 OP2 G A 19 -10.610 -7.402 10.037 1.00 80.26 O
ATOM 5 O5' G A 19 -9.906 -8.401 7.846 1.00 69.18 O
ATOM 6 C5' G A 19 -9.730 -8.405 6.434 1.00 67.36 C
ATOM 7 C4' G A 19 -8.722 -9.452 6.025 1.00 64.74 C
ATOM 8 O4' G A 19 -7.473 -9.214 6.727 1.00 65.81 O
ATOM 9 C3' G A 19 -9.058 -10.886 6.384 1.00 67.92 C
ATOM 10 O3' G A 19 -9.939 -11.465 5.435 1.00 79.80 O
ATOM 11 C2' G A 19 -7.684 -11.538 6.343 1.00 66.99 C
ATOM 12 O2' G A 19 -7.220 -11.756 5.028 1.00 66.75 O
ATOM 13 C1' G A 19 -6.833 -10.454 7.002 1.00 63.08 C
ATOM 14 N9 G A 19 -6.740 -10.634 8.453 1.00 58.36 N
ATOM 15 C8 G A 19 -7.256 -9.825 9.445 1.00 54.00 C
ATOM 16 N7 G A 19 -7.015 -10.274 10.648 1.00 50.18 N
ATOM 17 C5 G A 19 -6.294 -11.446 10.439 1.00 46.03 C
ATOM 18 C6 G A 19 -5.754 -12.381 11.370 1.00 45.80 C
ATOM 19 O6 G A 19 -5.798 -12.356 12.614 1.00 42.03 O
ATOM 20 N1 G A 19 -5.109 -13.431 10.719 1.00 41.65 N
ATOM 21 C2 G A 19 -4.995 -13.566 9.358 1.00 39.62 C
ATOM 22 N2 G A 19 -4.357 -14.652 8.914 1.00 27.87 N
ATOM 23 N3 G A 19 -5.479 -12.701 8.489 1.00 42.76 N
ATOM 24 C4 G A 19 -6.114 -11.677 9.093 1.00 43.45 C
ATOM 25 P C A 20 -10.854 -12.719 5.860 1.00 82.01 P
ATOM 26 OP1 C A 20 -11.613 -13.129 4.647 1.00 79.19 O
ATOM 27 OP2 C A 20 -11.584 -12.388 7.113 1.00 73.48 O
ATOM 28 O5' C A 20 -9.807 -13.870 6.190 1.00 70.62 O
TER
ATOM 1 O3' C B 1 1.989 -18.813 11.387 1.00 82.86 O
ATOM 2 P G B 2 3.050 -17.611 11.258 1.00 86.67 P
ATOM 3 OP1 G B 2 4.294 -18.224 10.724 1.00 84.35 O
ATOM 4 OP2 G B 2 3.099 -16.822 12.522 1.00 87.92 O
ATOM 5 O5' G B 2 2.432 -16.695 10.115 1.00 80.85 O
ATOM 6 C5' G B 2 2.341 -17.187 8.785 1.00 79.01 C
ATOM 7 C4' G B 2 1.781 -16.131 7.879 1.00 71.30 C
ATOM 8 O4' G B 2 0.359 -15.972 8.105 1.00 71.19 O
ATOM 9 C3' G B 2 2.335 -14.745 8.117 1.00 73.55 C
ATOM 10 O3' G B 2 3.629 -14.613 7.540 1.00 79.88 O
ATOM 11 C2' G B 2 1.267 -13.876 7.464 1.00 71.02 C
ATOM 12 O2' G B 2 1.361 -13.817 6.059 1.00 72.14 O
ATOM 13 C1' G B 2 -0.008 -14.624 7.860 1.00 68.51 C
ATOM 14 N9 G B 2 -0.568 -14.075 9.086 1.00 64.55 N
ATOM 15 C8 G B 2 -0.413 -14.557 10.362 1.00 63.78 C
ATOM 16 N7 G B 2 -0.985 -13.809 11.265 1.00 59.22 N
ATOM 17 C5 G B 2 -1.560 -12.777 10.540 1.00 55.16 C
ATOM 18 C6 G B 2 -2.304 -11.652 10.980 1.00 55.53 C
ATOM 19 O6 G B 2 -2.596 -11.328 12.143 1.00 47.02 O
ATOM 20 N1 G B 2 -2.711 -10.860 9.906 1.00 52.25 N
ATOM 21 C2 G B 2 -2.426 -11.118 8.580 1.00 58.77 C
ATOM 22 N2 G B 2 -2.899 -10.241 7.681 1.00 58.20 N
ATOM 23 N3 G B 2 -1.724 -12.160 8.164 1.00 54.98 N
ATOM 24 C4 G B 2 -1.327 -12.940 9.190 1.00 58.82 C
ATOM 25 P U B 3 4.553 -13.366 7.945 1.00 73.18 P
ATOM 26 OP1 U B 3 5.864 -13.581 7.283 1.00 74.42 O
ATOM 27 OP2 U B 3 4.493 -13.194 9.419 1.00 75.31 O
ATOM 28 O5' U B 3 3.806 -12.148 7.244 1.00 64.44 O
TER
ATOM 2 P G A 19 -10.594 -7.159 8.571 1.00 75.89 P
ATOM 3 OP1 G A 19 -11.862 -6.865 7.865 1.00 80.06 O
ATOM 4 OP2 G A 19 -10.610 -7.402 10.037 1.00 80.26 O
ATOM 5 O5' G A 19 -9.906 -8.401 7.846 1.00 69.18 O
ATOM 6 C5' G A 19 -9.730 -8.405 6.434 1.00 67.36 C
ATOM 7 C4' G A 19 -8.722 -9.452 6.025 1.00 64.74 C
ATOM 8 O4' G A 19 -7.473 -9.214 6.727 1.00 65.81 O
ATOM 9 C3' G A 19 -9.058 -10.886 6.384 1.00 67.92 C
ATOM 10 O3' G A 19 -9.939 -11.465 5.435 1.00 79.80 O
ATOM 11 C2' G A 19 -7.684 -11.538 6.343 1.00 66.99 C
ATOM 12 O2' G A 19 -7.220 -11.756 5.028 1.00 66.75 O
ATOM 13 C1' G A 19 -6.833 -10.454 7.002 1.00 63.08 C
ATOM 14 N9 G A 19 -6.740 -10.634 8.453 1.00 58.36 N
ATOM 15 C8 G A 19 -7.256 -9.825 9.445 1.00 54.00 C
ATOM 16 N7 G A 19 -7.015 -10.274 10.648 1.00 50.18 N
ATOM 17 C5 G A 19 -6.294 -11.446 10.439 1.00 46.03 C
ATOM 18 C6 G A 19 -5.754 -12.381 11.370 1.00 45.80 C
ATOM 19 O6 G A 19 -5.798 -12.356 12.614 1.00 42.03 O
ATOM 20 N1 G A 19 -5.109 -13.431 10.719 1.00 41.65 N
ATOM 21 C2 G A 19 -4.995 -13.566 9.358 1.00 39.62 C
ATOM 22 N2 G A 19 -4.357 -14.652 8.914 1.00 27.87 N
ATOM 23 N3 G A 19 -5.479 -12.701 8.489 1.00 42.76 N
ATOM 24 C4 G A 19 -6.114 -11.677 9.093 1.00 43.45 C
ATOM 25 P C A 20 -10.854 -12.719 5.860 1.00 82.01 P
ATOM 26 OP1 C A 20 -11.613 -13.129 4.647 1.00 79.19 O
ATOM 27 OP2 C A 20 -11.584 -12.388 7.113 1.00 73.48 O
ATOM 28 O5' C A 20 -9.807 -13.870 6.190 1.00 70.62 O
TER
ATOM 1 O3' C B 1 1.989 -18.813 11.387 1.00 82.86 O
ATOM 2 P G B 2 3.050 -17.611 11.258 1.00 86.67 P
ATOM 3 OP1 G B 2 4.294 -18.224 10.724 1.00 84.35 O
ATOM 4 OP2 G B 2 3.099 -16.822 12.522 1.00 87.92 O
ATOM 5 O5' G B 2 2.432 -16.695 10.115 1.00 80.85 O
ATOM 6 C5' G B 2 2.341 -17.187 8.785 1.00 79.01 C
ATOM 7 C4' G B 2 1.781 -16.131 7.879 1.00 71.30 C
ATOM 8 O4' G B 2 0.359 -15.972 8.105 1.00 71.19 O
ATOM 9 C3' G B 2 2.335 -14.745 8.117 1.00 73.55 C
ATOM 10 O3' G B 2 3.629 -14.613 7.540 1.00 79.88 O
ATOM 11 C2' G B 2 1.267 -13.876 7.464 1.00 71.02 C
ATOM 12 O2' G B 2 1.361 -13.817 6.059 1.00 72.14 O
ATOM 13 C1' G B 2 -0.008 -14.624 7.860 1.00 68.51 C
ATOM 14 N9 G B 2 -0.568 -14.075 9.086 1.00 64.55 N
ATOM 15 C8 G B 2 -0.413 -14.557 10.362 1.00 63.78 C
ATOM 16 N7 G B 2 -0.985 -13.809 11.265 1.00 59.22 N
ATOM 17 C5 G B 2 -1.560 -12.777 10.540 1.00 55.16 C
ATOM 18 C6 G B 2 -2.304 -11.652 10.980 1.00 55.53 C
ATOM 19 O6 G B 2 -2.596 -11.328 12.143 1.00 47.02 O
ATOM 20 N1 G B 2 -2.711 -10.860 9.906 1.00 52.25 N
ATOM 21 C2 G B 2 -2.426 -11.118 8.580 1.00 58.77 C
ATOM 22 N2 G B 2 -2.899 -10.241 7.681 1.00 58.20 N
ATOM 23 N3 G B 2 -1.724 -12.160 8.164 1.00 54.98 N
ATOM 24 C4 G B 2 -1.327 -12.940 9.190 1.00 58.82 C
ATOM 25 P U B 3 4.553 -13.366 7.945 1.00 73.18 P
ATOM 26 OP1 U B 3 5.864 -13.581 7.283 1.00 74.42 O
ATOM 27 OP2 U B 3 4.493 -13.194 9.419 1.00 75.31 O
ATOM 28 O5' U B 3 3.806 -12.148 7.244 1.00 64.44 O
TER
Atoms:
OP1: (-11.862,-6.865,7.865)
OP2: (-10.610,-7.402,10.037)
C3': (-9.058,-10.886,6.384)
C1': (-6.833,-10.454,7.002)
C5': (-9.730,-8.405,6.434)
O6: (-5.798,-12.356,12.614)
O4': (-7.473,-9.214,6.727)
C8: (-7.256,-9.825,9.445)
C2: (-4.995,-13.566,9.358)
C6: (-5.754,-12.381,11.370)
C5: (-6.294,-11.446,10.439)
C4: (-6.114,-11.677,9.093)
P: (-10.594,-7.159,8.571)
C4': (-8.722,-9.452,6.025)
C2': (-7.684,-11.538,6.343)
O2': (-7.220,-11.756,5.028)
N1: (-5.109,-13.431,10.719)
N2: (-4.357,-14.652,8.914)
N3: (-5.479,-12.701,8.489)
N7: (-7.015,-10.274,10.648)
N9: (-6.740,-10.634,8.453)
O5': (-9.906,-8.401,7.846)
O3': (-9.939,-11.465,5.435)
OP2: (-10.610,-7.402,10.037)
C3': (-9.058,-10.886,6.384)
C1': (-6.833,-10.454,7.002)
C5': (-9.730,-8.405,6.434)
O6: (-5.798,-12.356,12.614)
O4': (-7.473,-9.214,6.727)
C8: (-7.256,-9.825,9.445)
C2: (-4.995,-13.566,9.358)
C6: (-5.754,-12.381,11.370)
C5: (-6.294,-11.446,10.439)
C4: (-6.114,-11.677,9.093)
P: (-10.594,-7.159,8.571)
C4': (-8.722,-9.452,6.025)
C2': (-7.684,-11.538,6.343)
O2': (-7.220,-11.756,5.028)
N1: (-5.109,-13.431,10.719)
N2: (-4.357,-14.652,8.914)
N3: (-5.479,-12.701,8.489)
N7: (-7.015,-10.274,10.648)
N9: (-6.740,-10.634,8.453)
O5': (-9.906,-8.401,7.846)
O3': (-9.939,-11.465,5.435)
OP1: (4.294,-18.224,10.724)
OP2: (3.099,-16.822,12.522)
C3': (2.335,-14.745,8.117)
C1': (-0.008,-14.624,7.860)
C5': (2.341,-17.187,8.785)
O6: (-2.596,-11.328,12.143)
O4': (0.359,-15.972,8.105)
C8: (-0.413,-14.557,10.362)
C2: (-2.426,-11.118,8.580)
C6: (-2.304,-11.652,10.980)
C5: (-1.560,-12.777,10.540)
C4: (-1.327,-12.940,9.190)
P: (3.050,-17.611,11.258)
C4': (1.781,-16.131,7.879)
C2': (1.267,-13.876,7.464)
O2': (1.361,-13.817,6.059)
N1: (-2.711,-10.860,9.906)
N2: (-2.899,-10.241,7.681)
N3: (-1.724,-12.160,8.164)
N7: (-0.985,-13.809,11.265)
N9: (-0.568,-14.075,9.086)
O5': (2.432,-16.695,10.115)
O3': (3.629,-14.613,7.540)
OP2: (3.099,-16.822,12.522)
C3': (2.335,-14.745,8.117)
C1': (-0.008,-14.624,7.860)
C5': (2.341,-17.187,8.785)
O6: (-2.596,-11.328,12.143)
O4': (0.359,-15.972,8.105)
C8: (-0.413,-14.557,10.362)
C2: (-2.426,-11.118,8.580)
C6: (-2.304,-11.652,10.980)
C5: (-1.560,-12.777,10.540)
C4: (-1.327,-12.940,9.190)
P: (3.050,-17.611,11.258)
C4': (1.781,-16.131,7.879)
C2': (1.267,-13.876,7.464)
O2': (1.361,-13.817,6.059)
N1: (-2.711,-10.860,9.906)
N2: (-2.899,-10.241,7.681)
N3: (-1.724,-12.160,8.164)
N7: (-0.985,-13.809,11.265)
N9: (-0.568,-14.075,9.086)
O5': (2.432,-16.695,10.115)
O3': (3.629,-14.613,7.540)
Image (generated by PyMOL):