Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2Y9H:L7:L11
Extra
PDB:
ATOM 1 O3' C A 6 22.507 -28.002 -19.118 1.00 44.10 O
ATOM 2 P G A 7 22.763 -28.817 -20.471 1.00 44.35 P
ATOM 3 OP1 G A 7 24.110 -28.450 -20.941 1.00 30.73 O
ATOM 4 OP2 G A 7 21.605 -28.566 -21.359 1.00 61.24 O
ATOM 5 O5' G A 7 22.751 -30.334 -19.985 1.00 55.05 O
ATOM 6 C5' G A 7 23.797 -30.856 -19.176 1.00 39.59 C
ATOM 7 C4' G A 7 23.586 -32.320 -18.876 1.00 33.65 C
ATOM 8 O4' G A 7 22.339 -32.507 -18.144 1.00 37.34 O
ATOM 9 C3' G A 7 23.434 -33.233 -20.078 1.00 28.37 C
ATOM 10 O3' G A 7 24.671 -33.565 -20.683 1.00 23.23 O
ATOM 11 C2' G A 7 22.702 -34.428 -19.486 1.00 26.40 C
ATOM 12 O2' G A 7 23.592 -35.245 -18.761 1.00 26.00 O
ATOM 13 C1' G A 7 21.760 -33.746 -18.497 1.00 28.96 C
ATOM 14 N9 G A 7 20.440 -33.495 -19.102 1.00 42.62 N
ATOM 15 C8 G A 7 19.928 -32.310 -19.559 1.00 21.66 C
ATOM 16 N7 G A 7 18.738 -32.456 -20.072 1.00 45.27 N
ATOM 17 C5 G A 7 18.438 -33.807 -19.960 1.00 41.97 C
ATOM 18 C6 G A 7 17.286 -34.560 -20.341 1.00 36.45 C
ATOM 19 O6 G A 7 16.238 -34.179 -20.875 1.00 38.91 O
ATOM 20 N1 G A 7 17.423 -35.909 -20.030 1.00 34.22 N
ATOM 21 C2 G A 7 18.532 -36.468 -19.435 1.00 33.98 C
ATOM 22 N2 G A 7 18.492 -37.789 -19.216 1.00 31.94 N
ATOM 23 N3 G A 7 19.608 -35.784 -19.082 1.00 31.02 N
ATOM 24 C4 G A 7 19.492 -34.465 -19.361 1.00 43.96 C
ATOM 25 P C A 8 24.874 -33.317 -22.249 1.00 33.33 P
ATOM 26 OP1 C A 8 25.816 -32.201 -22.401 1.00 28.21 O
ATOM 27 OP2 C A 8 23.523 -33.188 -22.831 1.00 42.48 O
ATOM 28 O5' C A 8 25.568 -34.660 -22.753 1.00 29.87 O
TER
ATOM 1 O3' U B 10 18.691 -44.270 -15.381 1.00 80.26 O
ATOM 2 P G B 11 17.219 -44.312 -15.997 1.00 55.30 P
ATOM 3 OP1 G B 11 17.340 -44.618 -17.439 1.00 76.46 O
ATOM 4 OP2 G B 11 16.414 -45.212 -15.151 1.00 55.69 O
ATOM 5 O5' G B 11 16.752 -42.801 -15.799 1.00 77.08 O
ATOM 6 C5' G B 11 16.849 -42.170 -14.526 1.00 66.27 C
ATOM 7 C4' G B 11 18.064 -41.267 -14.408 1.00 47.68 C
ATOM 8 O4' G B 11 18.313 -40.579 -15.667 1.00 42.98 O
ATOM 9 C3' G B 11 17.942 -40.137 -13.397 1.00 29.32 C
ATOM 10 O3' G B 11 18.168 -40.559 -12.078 1.00 29.57 O
ATOM 11 C2' G B 11 18.959 -39.127 -13.899 1.00 23.89 C
ATOM 12 O2' G B 11 20.271 -39.524 -13.542 1.00 30.79 O
ATOM 13 C1' G B 11 18.801 -39.272 -15.414 1.00 26.36 C
ATOM 14 N9 G B 11 17.834 -38.298 -15.964 1.00 23.34 N
ATOM 15 C8 G B 11 16.608 -38.595 -16.492 1.00 19.96 C
ATOM 16 N7 G B 11 15.956 -37.538 -16.903 1.00 34.30 N
ATOM 17 C5 G B 11 16.793 -36.477 -16.616 1.00 33.53 C
ATOM 18 C6 G B 11 16.628 -35.081 -16.831 1.00 32.39 C
ATOM 19 O6 G B 11 15.676 -34.502 -17.321 1.00 35.80 O
ATOM 20 N1 G B 11 17.711 -34.329 -16.400 1.00 29.29 N
ATOM 21 C2 G B 11 18.827 -34.879 -15.821 1.00 35.68 C
ATOM 22 N2 G B 11 19.778 -34.005 -15.470 1.00 37.58 N
ATOM 23 N3 G B 11 19.007 -36.181 -15.610 1.00 34.66 N
ATOM 24 C4 G B 11 17.959 -36.927 -16.031 1.00 30.30 C
ATOM 25 P U B 12 17.292 -39.972 -10.876 1.00 30.11 P
ATOM 26 OP1 U B 12 17.508 -40.865 -9.711 1.00 39.34 O
ATOM 27 OP2 U B 12 15.932 -39.780 -11.365 1.00 24.95 O
ATOM 28 O5' U B 12 17.963 -38.571 -10.612 1.00 34.48 O
TER
ATOM 2 P G A 7 22.763 -28.817 -20.471 1.00 44.35 P
ATOM 3 OP1 G A 7 24.110 -28.450 -20.941 1.00 30.73 O
ATOM 4 OP2 G A 7 21.605 -28.566 -21.359 1.00 61.24 O
ATOM 5 O5' G A 7 22.751 -30.334 -19.985 1.00 55.05 O
ATOM 6 C5' G A 7 23.797 -30.856 -19.176 1.00 39.59 C
ATOM 7 C4' G A 7 23.586 -32.320 -18.876 1.00 33.65 C
ATOM 8 O4' G A 7 22.339 -32.507 -18.144 1.00 37.34 O
ATOM 9 C3' G A 7 23.434 -33.233 -20.078 1.00 28.37 C
ATOM 10 O3' G A 7 24.671 -33.565 -20.683 1.00 23.23 O
ATOM 11 C2' G A 7 22.702 -34.428 -19.486 1.00 26.40 C
ATOM 12 O2' G A 7 23.592 -35.245 -18.761 1.00 26.00 O
ATOM 13 C1' G A 7 21.760 -33.746 -18.497 1.00 28.96 C
ATOM 14 N9 G A 7 20.440 -33.495 -19.102 1.00 42.62 N
ATOM 15 C8 G A 7 19.928 -32.310 -19.559 1.00 21.66 C
ATOM 16 N7 G A 7 18.738 -32.456 -20.072 1.00 45.27 N
ATOM 17 C5 G A 7 18.438 -33.807 -19.960 1.00 41.97 C
ATOM 18 C6 G A 7 17.286 -34.560 -20.341 1.00 36.45 C
ATOM 19 O6 G A 7 16.238 -34.179 -20.875 1.00 38.91 O
ATOM 20 N1 G A 7 17.423 -35.909 -20.030 1.00 34.22 N
ATOM 21 C2 G A 7 18.532 -36.468 -19.435 1.00 33.98 C
ATOM 22 N2 G A 7 18.492 -37.789 -19.216 1.00 31.94 N
ATOM 23 N3 G A 7 19.608 -35.784 -19.082 1.00 31.02 N
ATOM 24 C4 G A 7 19.492 -34.465 -19.361 1.00 43.96 C
ATOM 25 P C A 8 24.874 -33.317 -22.249 1.00 33.33 P
ATOM 26 OP1 C A 8 25.816 -32.201 -22.401 1.00 28.21 O
ATOM 27 OP2 C A 8 23.523 -33.188 -22.831 1.00 42.48 O
ATOM 28 O5' C A 8 25.568 -34.660 -22.753 1.00 29.87 O
TER
ATOM 1 O3' U B 10 18.691 -44.270 -15.381 1.00 80.26 O
ATOM 2 P G B 11 17.219 -44.312 -15.997 1.00 55.30 P
ATOM 3 OP1 G B 11 17.340 -44.618 -17.439 1.00 76.46 O
ATOM 4 OP2 G B 11 16.414 -45.212 -15.151 1.00 55.69 O
ATOM 5 O5' G B 11 16.752 -42.801 -15.799 1.00 77.08 O
ATOM 6 C5' G B 11 16.849 -42.170 -14.526 1.00 66.27 C
ATOM 7 C4' G B 11 18.064 -41.267 -14.408 1.00 47.68 C
ATOM 8 O4' G B 11 18.313 -40.579 -15.667 1.00 42.98 O
ATOM 9 C3' G B 11 17.942 -40.137 -13.397 1.00 29.32 C
ATOM 10 O3' G B 11 18.168 -40.559 -12.078 1.00 29.57 O
ATOM 11 C2' G B 11 18.959 -39.127 -13.899 1.00 23.89 C
ATOM 12 O2' G B 11 20.271 -39.524 -13.542 1.00 30.79 O
ATOM 13 C1' G B 11 18.801 -39.272 -15.414 1.00 26.36 C
ATOM 14 N9 G B 11 17.834 -38.298 -15.964 1.00 23.34 N
ATOM 15 C8 G B 11 16.608 -38.595 -16.492 1.00 19.96 C
ATOM 16 N7 G B 11 15.956 -37.538 -16.903 1.00 34.30 N
ATOM 17 C5 G B 11 16.793 -36.477 -16.616 1.00 33.53 C
ATOM 18 C6 G B 11 16.628 -35.081 -16.831 1.00 32.39 C
ATOM 19 O6 G B 11 15.676 -34.502 -17.321 1.00 35.80 O
ATOM 20 N1 G B 11 17.711 -34.329 -16.400 1.00 29.29 N
ATOM 21 C2 G B 11 18.827 -34.879 -15.821 1.00 35.68 C
ATOM 22 N2 G B 11 19.778 -34.005 -15.470 1.00 37.58 N
ATOM 23 N3 G B 11 19.007 -36.181 -15.610 1.00 34.66 N
ATOM 24 C4 G B 11 17.959 -36.927 -16.031 1.00 30.30 C
ATOM 25 P U B 12 17.292 -39.972 -10.876 1.00 30.11 P
ATOM 26 OP1 U B 12 17.508 -40.865 -9.711 1.00 39.34 O
ATOM 27 OP2 U B 12 15.932 -39.780 -11.365 1.00 24.95 O
ATOM 28 O5' U B 12 17.963 -38.571 -10.612 1.00 34.48 O
TER
Atoms:
OP1: (24.110,-28.450,-20.941)
OP2: (21.605,-28.566,-21.359)
C3': (23.434,-33.233,-20.078)
C1': (21.760,-33.746,-18.497)
C5': (23.797,-30.856,-19.176)
O6: (16.238,-34.179,-20.875)
O4': (22.339,-32.507,-18.144)
C8: (19.928,-32.310,-19.559)
C2: (18.532,-36.468,-19.435)
C6: (17.286,-34.560,-20.341)
C5: (18.438,-33.807,-19.960)
C4: (19.492,-34.465,-19.361)
P: (22.763,-28.817,-20.471)
C4': (23.586,-32.320,-18.876)
C2': (22.702,-34.428,-19.486)
O2': (23.592,-35.245,-18.761)
N1: (17.423,-35.909,-20.030)
N2: (18.492,-37.789,-19.216)
N3: (19.608,-35.784,-19.082)
N7: (18.738,-32.456,-20.072)
N9: (20.440,-33.495,-19.102)
O5': (22.751,-30.334,-19.985)
O3': (24.671,-33.565,-20.683)
OP2: (21.605,-28.566,-21.359)
C3': (23.434,-33.233,-20.078)
C1': (21.760,-33.746,-18.497)
C5': (23.797,-30.856,-19.176)
O6: (16.238,-34.179,-20.875)
O4': (22.339,-32.507,-18.144)
C8: (19.928,-32.310,-19.559)
C2: (18.532,-36.468,-19.435)
C6: (17.286,-34.560,-20.341)
C5: (18.438,-33.807,-19.960)
C4: (19.492,-34.465,-19.361)
P: (22.763,-28.817,-20.471)
C4': (23.586,-32.320,-18.876)
C2': (22.702,-34.428,-19.486)
O2': (23.592,-35.245,-18.761)
N1: (17.423,-35.909,-20.030)
N2: (18.492,-37.789,-19.216)
N3: (19.608,-35.784,-19.082)
N7: (18.738,-32.456,-20.072)
N9: (20.440,-33.495,-19.102)
O5': (22.751,-30.334,-19.985)
O3': (24.671,-33.565,-20.683)
OP1: (17.340,-44.618,-17.439)
OP2: (16.414,-45.212,-15.151)
C3': (17.942,-40.137,-13.397)
C1': (18.801,-39.272,-15.414)
C5': (16.849,-42.170,-14.526)
O6: (15.676,-34.502,-17.321)
O4': (18.313,-40.579,-15.667)
C8: (16.608,-38.595,-16.492)
C2: (18.827,-34.879,-15.821)
C6: (16.628,-35.081,-16.831)
C5: (16.793,-36.477,-16.616)
C4: (17.959,-36.927,-16.031)
P: (17.219,-44.312,-15.997)
C4': (18.064,-41.267,-14.408)
C2': (18.959,-39.127,-13.899)
O2': (20.271,-39.524,-13.542)
N1: (17.711,-34.329,-16.400)
N2: (19.778,-34.005,-15.470)
N3: (19.007,-36.181,-15.610)
N7: (15.956,-37.538,-16.903)
N9: (17.834,-38.298,-15.964)
O5': (16.752,-42.801,-15.799)
O3': (18.168,-40.559,-12.078)
OP2: (16.414,-45.212,-15.151)
C3': (17.942,-40.137,-13.397)
C1': (18.801,-39.272,-15.414)
C5': (16.849,-42.170,-14.526)
O6: (15.676,-34.502,-17.321)
O4': (18.313,-40.579,-15.667)
C8: (16.608,-38.595,-16.492)
C2: (18.827,-34.879,-15.821)
C6: (16.628,-35.081,-16.831)
C5: (16.793,-36.477,-16.616)
C4: (17.959,-36.927,-16.031)
P: (17.219,-44.312,-15.997)
C4': (18.064,-41.267,-14.408)
C2': (18.959,-39.127,-13.899)
O2': (20.271,-39.524,-13.542)
N1: (17.711,-34.329,-16.400)
N2: (19.778,-34.005,-15.470)
N3: (19.007,-36.181,-15.610)
N7: (15.956,-37.538,-16.903)
N9: (17.834,-38.298,-15.964)
O5': (16.752,-42.801,-15.799)
O3': (18.168,-40.559,-12.078)
Image (generated by PyMOL):