ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:B80:B81

Extra

PDB:
ATOM 1 O3' U A 79 -134.686 -73.827 15.230 1.00 17.20 O
ATOM 2 P G A 80 -133.491 -74.881 15.461 1.00 28.06 P
ATOM 3 OP1 G A 80 -132.346 -74.170 16.091 1.00 45.11 O
ATOM 4 OP2 G A 80 -133.265 -75.692 14.218 1.00 45.11 O
ATOM 5 O5' G A 80 -134.107 -75.825 16.570 1.00 37.63 O
ATOM 6 C5' G A 80 -133.495 -77.052 16.864 1.00 37.63 C
ATOM 7 C4' G A 80 -133.939 -77.531 18.203 1.00 37.63 C
ATOM 8 O4' G A 80 -135.349 -77.888 18.174 1.00 37.63 O
ATOM 9 C3' G A 80 -133.236 -78.808 18.573 1.00 37.63 C
ATOM 10 O3' G A 80 -131.954 -78.501 19.061 1.00 37.63 O
ATOM 11 C2' G A 80 -134.196 -79.452 19.554 1.00 37.63 C
ATOM 12 O2' G A 80 -134.050 -78.910 20.850 1.00 37.63 O
ATOM 13 C1' G A 80 -135.556 -79.056 18.953 1.00 37.63 C
ATOM 14 N9 G A 80 -136.140 -80.108 18.111 1.00 81.85 N
ATOM 15 C8 G A 80 -136.421 -81.396 18.510 1.00 81.85 C
ATOM 16 N7 G A 80 -136.898 -82.142 17.551 1.00 81.85 N
ATOM 17 C5 G A 80 -136.949 -81.300 16.452 1.00 81.85 C
ATOM 18 C6 G A 80 -137.369 -81.558 15.127 1.00 81.85 C
ATOM 19 O6 G A 80 -137.793 -82.606 14.648 1.00 81.85 O
ATOM 20 N1 G A 80 -137.251 -80.435 14.326 1.00 81.85 N
ATOM 21 C2 G A 80 -136.787 -79.215 14.742 1.00 81.85 C
ATOM 22 N2 G A 80 -136.737 -78.254 13.803 1.00 81.85 N
ATOM 23 N3 G A 80 -136.396 -78.954 15.981 1.00 81.85 N
ATOM 24 C4 G A 80 -136.498 -80.037 16.777 1.00 81.85 C
ATOM 25 P G A 81 -130.691 -78.819 18.134 1.00 45.40 P
ATOM 26 OP1 G A 81 -129.483 -78.750 18.987 1.00 34.92 O
ATOM 27 OP2 G A 81 -130.759 -77.990 16.909 1.00 34.83 O
ATOM 28 O5' G A 81 -130.960 -80.333 17.731 1.00 28.42 O
TER

ATOM 1 O3' G B 80 -131.954 -78.501 19.061 1.00 37.63 O
ATOM 2 P G B 81 -130.691 -78.819 18.134 1.00 45.40 P
ATOM 3 OP1 G B 81 -129.483 -78.750 18.987 1.00 34.92 O
ATOM 4 OP2 G B 81 -130.759 -77.990 16.909 1.00 34.83 O
ATOM 5 O5' G B 81 -130.960 -80.333 17.731 1.00 28.42 O
ATOM 6 C5' G B 81 -131.162 -81.322 18.757 1.00 28.42 C
ATOM 7 C4' G B 81 -131.486 -82.669 18.157 1.00 28.42 C
ATOM 8 O4' G B 81 -132.874 -82.716 17.744 1.00 28.42 O
ATOM 9 C3' G B 81 -130.706 -83.071 16.922 1.00 28.42 C
ATOM 10 O3' G B 81 -129.430 -83.596 17.222 1.00 28.42 O
ATOM 11 C2' G B 81 -131.611 -84.108 16.280 1.00 28.42 C
ATOM 12 O2' G B 81 -131.443 -85.374 16.893 1.00 28.42 O
ATOM 13 C1' G B 81 -133.003 -83.551 16.601 1.00 28.42 C
ATOM 14 N9 G B 81 -133.605 -82.762 15.526 1.00 55.00 N
ATOM 15 C8 G B 81 -133.862 -81.416 15.552 1.00 55.03 C
ATOM 16 N7 G B 81 -134.408 -80.975 14.454 1.00 55.04 N
ATOM 17 C5 G B 81 -134.522 -82.096 13.649 1.00 55.02 C
ATOM 18 C6 G B 81 -135.037 -82.227 12.338 1.00 54.99 C
ATOM 19 O6 G B 81 -135.540 -81.350 11.613 1.00 54.97 O
ATOM 20 N1 G B 81 -134.935 -83.539 11.880 1.00 54.97 N
ATOM 21 C2 G B 81 -134.418 -84.590 12.599 1.00 54.97 C
ATOM 22 N2 G B 81 -134.392 -85.778 11.974 1.00 54.97 N
ATOM 23 N3 G B 81 -133.954 -84.482 13.835 1.00 54.95 N
ATOM 24 C4 G B 81 -134.030 -83.212 14.292 1.00 55.00 C
ATOM 25 P G B 82 -128.270 -83.486 16.120 1.00 53.11 P
ATOM 26 OP1 G B 82 -127.018 -84.019 16.722 1.00103.71 O
ATOM 27 OP2 G B 82 -128.291 -82.102 15.570 1.00103.71 O
ATOM 28 O5' G B 82 -128.748 -84.486 14.973 1.00 18.14 O
TER

Atoms:
OP1: (-132.346,-74.170,16.091)
OP2: (-133.265,-75.692,14.218)
C3': (-133.236,-78.808,18.573)
C1': (-135.556,-79.056,18.953)
C5': (-133.495,-77.052,16.864)
O6: (-137.793,-82.606,14.648)
O4': (-135.349,-77.888,18.174)
C8: (-136.421,-81.396,18.510)
C2: (-136.787,-79.215,14.742)
C6: (-137.369,-81.558,15.127)
C5: (-136.949,-81.300,16.452)
C4: (-136.498,-80.037,16.777)
P: (-133.491,-74.881,15.461)
C4': (-133.939,-77.531,18.203)
C2': (-134.196,-79.452,19.554)
O2': (-134.050,-78.910,20.850)
N1: (-137.251,-80.435,14.326)
N2: (-136.737,-78.254,13.803)
N3: (-136.396,-78.954,15.981)
N7: (-136.898,-82.142,17.551)
N9: (-136.140,-80.108,18.111)
O5': (-134.107,-75.825,16.570)
O3': (-131.954,-78.501,19.061)
OP1: (-129.483,-78.750,18.987)
OP2: (-130.759,-77.990,16.909)
C3': (-130.706,-83.071,16.922)
C1': (-133.003,-83.551,16.601)
C5': (-131.162,-81.322,18.757)
O6: (-135.540,-81.350,11.613)
O4': (-132.874,-82.716,17.744)
C8: (-133.862,-81.416,15.552)
C2: (-134.418,-84.590,12.599)
C6: (-135.037,-82.227,12.338)
C5: (-134.522,-82.096,13.649)
C4: (-134.030,-83.212,14.292)
P: (-130.691,-78.819,18.134)
C4': (-131.486,-82.669,18.157)
C2': (-131.611,-84.108,16.280)
O2': (-131.443,-85.374,16.893)
N1: (-134.935,-83.539,11.880)
N2: (-134.392,-85.778,11.974)
N3: (-133.954,-84.482,13.835)
N7: (-134.408,-80.975,14.454)
N9: (-133.605,-82.762,15.526)
O5': (-130.960,-80.333,17.731)
O3': (-129.430,-83.596,17.222)
Image (generated by PyMOL):
PyMOL image
show in jmol