Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2ESI:A21:B2
Extra
PDB:
ATOM 1 O3' C A 20 -9.968 -5.445 8.810 1.00 50.50 O
ATOM 2 P G A 21 -11.117 -6.544 9.085 1.00 51.43 P
ATOM 3 OP1 G A 21 -12.301 -6.096 8.286 1.00 51.47 O
ATOM 4 OP2 G A 21 -11.257 -6.706 10.574 1.00 50.85 O
ATOM 5 O5' G A 21 -10.520 -7.892 8.460 1.00 49.59 O
ATOM 6 C5' G A 21 -10.311 -7.989 7.062 1.00 48.63 C
ATOM 7 C4' G A 21 -9.357 -9.120 6.723 1.00 47.92 C
ATOM 8 O4' G A 21 -8.056 -8.886 7.331 1.00 47.44 O
ATOM 9 C3' G A 21 -9.694 -10.539 7.167 1.00 47.13 C
ATOM 10 O3' G A 21 -10.678 -11.137 6.337 1.00 46.83 O
ATOM 11 C2' G A 21 -8.341 -11.227 7.014 1.00 46.53 C
ATOM 12 O2' G A 21 -8.012 -11.523 5.671 1.00 45.42 O
ATOM 13 C1' G A 21 -7.411 -10.138 7.557 1.00 46.24 C
ATOM 14 N9 G A 21 -7.265 -10.333 8.996 1.00 45.14 N
ATOM 15 C8 G A 21 -7.781 -9.567 10.019 1.00 44.44 C
ATOM 16 N7 G A 21 -7.520 -10.054 11.204 1.00 43.76 N
ATOM 17 C5 G A 21 -6.781 -11.201 10.944 1.00 43.91 C
ATOM 18 C6 G A 21 -6.228 -12.157 11.829 1.00 43.26 C
ATOM 19 O6 G A 21 -6.292 -12.183 13.063 1.00 42.73 O
ATOM 20 N1 G A 21 -5.551 -13.168 11.138 1.00 42.84 N
ATOM 21 C2 G A 21 -5.438 -13.250 9.767 1.00 43.14 C
ATOM 22 N2 G A 21 -4.767 -14.311 9.280 1.00 42.79 N
ATOM 23 N3 G A 21 -5.951 -12.363 8.933 1.00 43.51 N
ATOM 24 C4 G A 21 -6.604 -11.375 9.585 1.00 44.37 C
ATOM 25 P C A 22 -11.582 -12.337 6.917 1.00 46.06 P
ATOM 26 OP1 C A 22 -12.569 -12.692 5.857 1.00 46.72 O
ATOM 27 OP2 C A 22 -12.071 -12.002 8.290 1.00 45.41 O
ATOM 28 O5' C A 22 -10.561 -13.558 6.964 1.00 45.12 O
TER
ATOM 1 O3' C B 1 1.582 -18.829 10.715 1.00 46.66 O
ATOM 2 P G B 2 2.691 -17.674 10.492 1.00 47.03 P
ATOM 3 OP1 G B 2 3.835 -18.237 9.725 1.00 46.78 O
ATOM 4 OP2 G B 2 2.925 -17.091 11.852 1.00 47.22 O
ATOM 5 O5' G B 2 1.971 -16.575 9.577 1.00 46.31 O
ATOM 6 C5' G B 2 1.735 -16.810 8.192 1.00 44.90 C
ATOM 7 C4' G B 2 0.918 -15.685 7.584 1.00 44.45 C
ATOM 8 O4' G B 2 -0.374 -15.576 8.246 1.00 43.55 O
ATOM 9 C3' G B 2 1.453 -14.270 7.712 1.00 44.76 C
ATOM 10 O3' G B 2 2.485 -13.972 6.774 1.00 46.00 O
ATOM 11 C2' G B 2 0.214 -13.438 7.397 1.00 44.18 C
ATOM 12 O2' G B 2 -0.025 -13.307 6.009 1.00 45.93 O
ATOM 13 C1' G B 2 -0.900 -14.271 8.025 1.00 42.79 C
ATOM 14 N9 G B 2 -1.336 -13.690 9.286 1.00 40.83 N
ATOM 15 C8 G B 2 -1.118 -14.170 10.553 1.00 40.09 C
ATOM 16 N7 G B 2 -1.629 -13.412 11.484 1.00 38.63 N
ATOM 17 C5 G B 2 -2.219 -12.367 10.788 1.00 39.03 C
ATOM 18 C6 G B 2 -2.920 -11.227 11.260 1.00 39.01 C
ATOM 19 O6 G B 2 -3.168 -10.900 12.421 1.00 40.32 O
ATOM 20 N1 G B 2 -3.348 -10.420 10.215 1.00 38.56 N
ATOM 21 C2 G B 2 -3.130 -10.667 8.885 1.00 38.58 C
ATOM 22 N2 G B 2 -3.628 -9.766 8.033 1.00 38.34 N
ATOM 23 N3 G B 2 -2.475 -11.724 8.426 1.00 39.13 N
ATOM 24 C4 G B 2 -2.049 -12.526 9.431 1.00 39.67 C
ATOM 25 P U B 3 3.741 -13.092 7.255 1.00 47.00 P
ATOM 26 OP1 U B 3 4.953 -13.397 6.428 1.00 45.69 O
ATOM 27 OP2 U B 3 3.746 -13.349 8.732 1.00 46.97 O
ATOM 28 O5' U B 3 3.322 -11.569 7.015 1.00 45.98 O
TER
ATOM 2 P G A 21 -11.117 -6.544 9.085 1.00 51.43 P
ATOM 3 OP1 G A 21 -12.301 -6.096 8.286 1.00 51.47 O
ATOM 4 OP2 G A 21 -11.257 -6.706 10.574 1.00 50.85 O
ATOM 5 O5' G A 21 -10.520 -7.892 8.460 1.00 49.59 O
ATOM 6 C5' G A 21 -10.311 -7.989 7.062 1.00 48.63 C
ATOM 7 C4' G A 21 -9.357 -9.120 6.723 1.00 47.92 C
ATOM 8 O4' G A 21 -8.056 -8.886 7.331 1.00 47.44 O
ATOM 9 C3' G A 21 -9.694 -10.539 7.167 1.00 47.13 C
ATOM 10 O3' G A 21 -10.678 -11.137 6.337 1.00 46.83 O
ATOM 11 C2' G A 21 -8.341 -11.227 7.014 1.00 46.53 C
ATOM 12 O2' G A 21 -8.012 -11.523 5.671 1.00 45.42 O
ATOM 13 C1' G A 21 -7.411 -10.138 7.557 1.00 46.24 C
ATOM 14 N9 G A 21 -7.265 -10.333 8.996 1.00 45.14 N
ATOM 15 C8 G A 21 -7.781 -9.567 10.019 1.00 44.44 C
ATOM 16 N7 G A 21 -7.520 -10.054 11.204 1.00 43.76 N
ATOM 17 C5 G A 21 -6.781 -11.201 10.944 1.00 43.91 C
ATOM 18 C6 G A 21 -6.228 -12.157 11.829 1.00 43.26 C
ATOM 19 O6 G A 21 -6.292 -12.183 13.063 1.00 42.73 O
ATOM 20 N1 G A 21 -5.551 -13.168 11.138 1.00 42.84 N
ATOM 21 C2 G A 21 -5.438 -13.250 9.767 1.00 43.14 C
ATOM 22 N2 G A 21 -4.767 -14.311 9.280 1.00 42.79 N
ATOM 23 N3 G A 21 -5.951 -12.363 8.933 1.00 43.51 N
ATOM 24 C4 G A 21 -6.604 -11.375 9.585 1.00 44.37 C
ATOM 25 P C A 22 -11.582 -12.337 6.917 1.00 46.06 P
ATOM 26 OP1 C A 22 -12.569 -12.692 5.857 1.00 46.72 O
ATOM 27 OP2 C A 22 -12.071 -12.002 8.290 1.00 45.41 O
ATOM 28 O5' C A 22 -10.561 -13.558 6.964 1.00 45.12 O
TER
ATOM 1 O3' C B 1 1.582 -18.829 10.715 1.00 46.66 O
ATOM 2 P G B 2 2.691 -17.674 10.492 1.00 47.03 P
ATOM 3 OP1 G B 2 3.835 -18.237 9.725 1.00 46.78 O
ATOM 4 OP2 G B 2 2.925 -17.091 11.852 1.00 47.22 O
ATOM 5 O5' G B 2 1.971 -16.575 9.577 1.00 46.31 O
ATOM 6 C5' G B 2 1.735 -16.810 8.192 1.00 44.90 C
ATOM 7 C4' G B 2 0.918 -15.685 7.584 1.00 44.45 C
ATOM 8 O4' G B 2 -0.374 -15.576 8.246 1.00 43.55 O
ATOM 9 C3' G B 2 1.453 -14.270 7.712 1.00 44.76 C
ATOM 10 O3' G B 2 2.485 -13.972 6.774 1.00 46.00 O
ATOM 11 C2' G B 2 0.214 -13.438 7.397 1.00 44.18 C
ATOM 12 O2' G B 2 -0.025 -13.307 6.009 1.00 45.93 O
ATOM 13 C1' G B 2 -0.900 -14.271 8.025 1.00 42.79 C
ATOM 14 N9 G B 2 -1.336 -13.690 9.286 1.00 40.83 N
ATOM 15 C8 G B 2 -1.118 -14.170 10.553 1.00 40.09 C
ATOM 16 N7 G B 2 -1.629 -13.412 11.484 1.00 38.63 N
ATOM 17 C5 G B 2 -2.219 -12.367 10.788 1.00 39.03 C
ATOM 18 C6 G B 2 -2.920 -11.227 11.260 1.00 39.01 C
ATOM 19 O6 G B 2 -3.168 -10.900 12.421 1.00 40.32 O
ATOM 20 N1 G B 2 -3.348 -10.420 10.215 1.00 38.56 N
ATOM 21 C2 G B 2 -3.130 -10.667 8.885 1.00 38.58 C
ATOM 22 N2 G B 2 -3.628 -9.766 8.033 1.00 38.34 N
ATOM 23 N3 G B 2 -2.475 -11.724 8.426 1.00 39.13 N
ATOM 24 C4 G B 2 -2.049 -12.526 9.431 1.00 39.67 C
ATOM 25 P U B 3 3.741 -13.092 7.255 1.00 47.00 P
ATOM 26 OP1 U B 3 4.953 -13.397 6.428 1.00 45.69 O
ATOM 27 OP2 U B 3 3.746 -13.349 8.732 1.00 46.97 O
ATOM 28 O5' U B 3 3.322 -11.569 7.015 1.00 45.98 O
TER
Atoms:
OP1: (-12.301,-6.096,8.286)
OP2: (-11.257,-6.706,10.574)
C3': (-9.694,-10.539,7.167)
C1': (-7.411,-10.138,7.557)
C5': (-10.311,-7.989,7.062)
O6: (-6.292,-12.183,13.063)
O4': (-8.056,-8.886,7.331)
C8: (-7.781,-9.567,10.019)
C2: (-5.438,-13.250,9.767)
C6: (-6.228,-12.157,11.829)
C5: (-6.781,-11.201,10.944)
C4: (-6.604,-11.375,9.585)
P: (-11.117,-6.544,9.085)
C4': (-9.357,-9.120,6.723)
C2': (-8.341,-11.227,7.014)
O2': (-8.012,-11.523,5.671)
N1: (-5.551,-13.168,11.138)
N2: (-4.767,-14.311,9.280)
N3: (-5.951,-12.363,8.933)
N7: (-7.520,-10.054,11.204)
N9: (-7.265,-10.333,8.996)
O5': (-10.520,-7.892,8.460)
O3': (-10.678,-11.137,6.337)
OP2: (-11.257,-6.706,10.574)
C3': (-9.694,-10.539,7.167)
C1': (-7.411,-10.138,7.557)
C5': (-10.311,-7.989,7.062)
O6: (-6.292,-12.183,13.063)
O4': (-8.056,-8.886,7.331)
C8: (-7.781,-9.567,10.019)
C2: (-5.438,-13.250,9.767)
C6: (-6.228,-12.157,11.829)
C5: (-6.781,-11.201,10.944)
C4: (-6.604,-11.375,9.585)
P: (-11.117,-6.544,9.085)
C4': (-9.357,-9.120,6.723)
C2': (-8.341,-11.227,7.014)
O2': (-8.012,-11.523,5.671)
N1: (-5.551,-13.168,11.138)
N2: (-4.767,-14.311,9.280)
N3: (-5.951,-12.363,8.933)
N7: (-7.520,-10.054,11.204)
N9: (-7.265,-10.333,8.996)
O5': (-10.520,-7.892,8.460)
O3': (-10.678,-11.137,6.337)
OP1: (3.835,-18.237,9.725)
OP2: (2.925,-17.091,11.852)
C3': (1.453,-14.270,7.712)
C1': (-0.900,-14.271,8.025)
C5': (1.735,-16.810,8.192)
O6: (-3.168,-10.900,12.421)
O4': (-0.374,-15.576,8.246)
C8: (-1.118,-14.170,10.553)
C2: (-3.130,-10.667,8.885)
C6: (-2.920,-11.227,11.260)
C5: (-2.219,-12.367,10.788)
C4: (-2.049,-12.526,9.431)
P: (2.691,-17.674,10.492)
C4': (0.918,-15.685,7.584)
C2': (0.214,-13.438,7.397)
O2': (-0.025,-13.307,6.009)
N1: (-3.348,-10.420,10.215)
N2: (-3.628,-9.766,8.033)
N3: (-2.475,-11.724,8.426)
N7: (-1.629,-13.412,11.484)
N9: (-1.336,-13.690,9.286)
O5': (1.971,-16.575,9.577)
O3': (2.485,-13.972,6.774)
OP2: (2.925,-17.091,11.852)
C3': (1.453,-14.270,7.712)
C1': (-0.900,-14.271,8.025)
C5': (1.735,-16.810,8.192)
O6: (-3.168,-10.900,12.421)
O4': (-0.374,-15.576,8.246)
C8: (-1.118,-14.170,10.553)
C2: (-3.130,-10.667,8.885)
C6: (-2.920,-11.227,11.260)
C5: (-2.219,-12.367,10.788)
C4: (-2.049,-12.526,9.431)
P: (2.691,-17.674,10.492)
C4': (0.918,-15.685,7.584)
C2': (0.214,-13.438,7.397)
O2': (-0.025,-13.307,6.009)
N1: (-3.348,-10.420,10.215)
N2: (-3.628,-9.766,8.033)
N3: (-2.475,-11.724,8.426)
N7: (-1.629,-13.412,11.484)
N9: (-1.336,-13.690,9.286)
O5': (1.971,-16.575,9.577)
O3': (2.485,-13.972,6.774)
Image (generated by PyMOL):