Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2D2K:C15:D2
Extra
PDB:
ATOM 1 O3' C A 14 39.118 -4.760 42.288 1.00 37.24 O
ATOM 2 P G A 15 40.547 -5.315 41.830 1.00 47.73 P
ATOM 3 OP1 G A 15 40.464 -6.785 41.937 1.00 52.94 O
ATOM 4 OP2 G A 15 41.610 -4.584 42.572 1.00 45.19 O
ATOM 5 O5' G A 15 40.603 -4.953 40.282 1.00 46.91 O
ATOM 6 C5' G A 15 39.683 -5.565 39.403 1.00 48.17 C
ATOM 7 C4' G A 15 39.630 -4.846 38.087 1.00 51.66 C
ATOM 8 O4' G A 15 39.309 -3.453 38.335 1.00 56.44 O
ATOM 9 C3' G A 15 40.935 -4.766 37.314 1.00 57.66 C
ATOM 10 O3' G A 15 41.255 -5.940 36.597 1.00 56.82 O
ATOM 11 C2' G A 15 40.691 -3.570 36.410 1.00 57.93 C
ATOM 12 O2' G A 15 39.833 -3.887 35.329 1.00 55.52 O
ATOM 13 C1' G A 15 39.962 -2.637 37.371 1.00 56.19 C
ATOM 14 N9 G A 15 40.916 -1.759 38.041 1.00 54.27 N
ATOM 15 C8 G A 15 41.336 -1.783 39.350 1.00 55.79 C
ATOM 16 N7 G A 15 42.223 -0.861 39.615 1.00 55.92 N
ATOM 17 C5 G A 15 42.385 -0.191 38.410 1.00 54.62 C
ATOM 18 C6 G A 15 43.213 0.906 38.069 1.00 53.66 C
ATOM 19 O6 G A 15 43.984 1.536 38.791 1.00 53.57 O
ATOM 20 N1 G A 15 43.076 1.255 36.731 1.00 53.93 N
ATOM 21 C2 G A 15 42.245 0.628 35.835 1.00 54.49 C
ATOM 22 N2 G A 15 42.251 1.095 34.575 1.00 48.61 N
ATOM 23 N3 G A 15 41.463 -0.386 36.144 1.00 55.22 N
ATOM 24 C4 G A 15 41.585 -0.739 37.435 1.00 54.63 C
ATOM 25 P A A 16 42.780 -6.436 36.565 1.00 59.07 P
ATOM 26 OP1 A A 16 42.752 -7.823 36.044 1.00 61.04 O
ATOM 27 OP2 A A 16 43.384 -6.160 37.897 1.00 56.61 O
ATOM 28 O5' A A 16 43.494 -5.466 35.518 1.00 55.37 O
TER
ATOM 1 O3' C B 1 42.939 8.415 31.932 1.00 46.01 O
ATOM 2 P G B 2 41.488 8.819 32.484 1.00 52.12 P
ATOM 3 OP1 G B 2 40.892 9.829 31.576 1.00 44.07 O
ATOM 4 OP2 G B 2 41.675 9.123 33.929 1.00 41.31 O
ATOM 5 O5' G B 2 40.625 7.485 32.420 1.00 50.10 O
ATOM 6 C5' G B 2 40.377 6.812 31.189 1.00 51.33 C
ATOM 7 C4' G B 2 39.750 5.480 31.476 1.00 43.42 C
ATOM 8 O4' G B 2 40.640 4.749 32.349 1.00 40.12 O
ATOM 9 C3' G B 2 38.469 5.592 32.279 1.00 41.63 C
ATOM 10 O3' G B 2 37.374 5.770 31.394 1.00 40.62 O
ATOM 11 C2' G B 2 38.403 4.250 32.997 1.00 42.23 C
ATOM 12 O2' G B 2 37.880 3.202 32.216 1.00 41.35 O
ATOM 13 C1' G B 2 39.882 3.987 33.272 1.00 42.55 C
ATOM 14 N9 G B 2 40.351 4.303 34.616 1.00 42.87 N
ATOM 15 C8 G B 2 41.180 5.340 34.976 1.00 46.22 C
ATOM 16 N7 G B 2 41.504 5.322 36.242 1.00 47.83 N
ATOM 17 C5 G B 2 40.829 4.222 36.755 1.00 47.03 C
ATOM 18 C6 G B 2 40.798 3.698 38.076 1.00 47.69 C
ATOM 19 O6 G B 2 41.363 4.122 39.077 1.00 50.47 O
ATOM 20 N1 G B 2 40.002 2.562 38.158 1.00 47.55 N
ATOM 21 C2 G B 2 39.313 2.008 37.104 1.00 47.76 C
ATOM 22 N2 G B 2 38.608 0.904 37.377 1.00 48.98 N
ATOM 23 N3 G B 2 39.319 2.498 35.869 1.00 46.07 N
ATOM 24 C4 G B 2 40.099 3.593 35.767 1.00 45.59 C
ATOM 25 P U B 3 35.990 6.374 31.950 1.00 44.46 P
ATOM 26 OP1 U B 3 35.054 6.465 30.788 1.00 45.22 O
ATOM 27 OP2 U B 3 36.318 7.592 32.723 1.00 44.09 O
ATOM 28 O5' U B 3 35.466 5.282 32.988 1.00 35.20 O
TER
ATOM 2 P G A 15 40.547 -5.315 41.830 1.00 47.73 P
ATOM 3 OP1 G A 15 40.464 -6.785 41.937 1.00 52.94 O
ATOM 4 OP2 G A 15 41.610 -4.584 42.572 1.00 45.19 O
ATOM 5 O5' G A 15 40.603 -4.953 40.282 1.00 46.91 O
ATOM 6 C5' G A 15 39.683 -5.565 39.403 1.00 48.17 C
ATOM 7 C4' G A 15 39.630 -4.846 38.087 1.00 51.66 C
ATOM 8 O4' G A 15 39.309 -3.453 38.335 1.00 56.44 O
ATOM 9 C3' G A 15 40.935 -4.766 37.314 1.00 57.66 C
ATOM 10 O3' G A 15 41.255 -5.940 36.597 1.00 56.82 O
ATOM 11 C2' G A 15 40.691 -3.570 36.410 1.00 57.93 C
ATOM 12 O2' G A 15 39.833 -3.887 35.329 1.00 55.52 O
ATOM 13 C1' G A 15 39.962 -2.637 37.371 1.00 56.19 C
ATOM 14 N9 G A 15 40.916 -1.759 38.041 1.00 54.27 N
ATOM 15 C8 G A 15 41.336 -1.783 39.350 1.00 55.79 C
ATOM 16 N7 G A 15 42.223 -0.861 39.615 1.00 55.92 N
ATOM 17 C5 G A 15 42.385 -0.191 38.410 1.00 54.62 C
ATOM 18 C6 G A 15 43.213 0.906 38.069 1.00 53.66 C
ATOM 19 O6 G A 15 43.984 1.536 38.791 1.00 53.57 O
ATOM 20 N1 G A 15 43.076 1.255 36.731 1.00 53.93 N
ATOM 21 C2 G A 15 42.245 0.628 35.835 1.00 54.49 C
ATOM 22 N2 G A 15 42.251 1.095 34.575 1.00 48.61 N
ATOM 23 N3 G A 15 41.463 -0.386 36.144 1.00 55.22 N
ATOM 24 C4 G A 15 41.585 -0.739 37.435 1.00 54.63 C
ATOM 25 P A A 16 42.780 -6.436 36.565 1.00 59.07 P
ATOM 26 OP1 A A 16 42.752 -7.823 36.044 1.00 61.04 O
ATOM 27 OP2 A A 16 43.384 -6.160 37.897 1.00 56.61 O
ATOM 28 O5' A A 16 43.494 -5.466 35.518 1.00 55.37 O
TER
ATOM 1 O3' C B 1 42.939 8.415 31.932 1.00 46.01 O
ATOM 2 P G B 2 41.488 8.819 32.484 1.00 52.12 P
ATOM 3 OP1 G B 2 40.892 9.829 31.576 1.00 44.07 O
ATOM 4 OP2 G B 2 41.675 9.123 33.929 1.00 41.31 O
ATOM 5 O5' G B 2 40.625 7.485 32.420 1.00 50.10 O
ATOM 6 C5' G B 2 40.377 6.812 31.189 1.00 51.33 C
ATOM 7 C4' G B 2 39.750 5.480 31.476 1.00 43.42 C
ATOM 8 O4' G B 2 40.640 4.749 32.349 1.00 40.12 O
ATOM 9 C3' G B 2 38.469 5.592 32.279 1.00 41.63 C
ATOM 10 O3' G B 2 37.374 5.770 31.394 1.00 40.62 O
ATOM 11 C2' G B 2 38.403 4.250 32.997 1.00 42.23 C
ATOM 12 O2' G B 2 37.880 3.202 32.216 1.00 41.35 O
ATOM 13 C1' G B 2 39.882 3.987 33.272 1.00 42.55 C
ATOM 14 N9 G B 2 40.351 4.303 34.616 1.00 42.87 N
ATOM 15 C8 G B 2 41.180 5.340 34.976 1.00 46.22 C
ATOM 16 N7 G B 2 41.504 5.322 36.242 1.00 47.83 N
ATOM 17 C5 G B 2 40.829 4.222 36.755 1.00 47.03 C
ATOM 18 C6 G B 2 40.798 3.698 38.076 1.00 47.69 C
ATOM 19 O6 G B 2 41.363 4.122 39.077 1.00 50.47 O
ATOM 20 N1 G B 2 40.002 2.562 38.158 1.00 47.55 N
ATOM 21 C2 G B 2 39.313 2.008 37.104 1.00 47.76 C
ATOM 22 N2 G B 2 38.608 0.904 37.377 1.00 48.98 N
ATOM 23 N3 G B 2 39.319 2.498 35.869 1.00 46.07 N
ATOM 24 C4 G B 2 40.099 3.593 35.767 1.00 45.59 C
ATOM 25 P U B 3 35.990 6.374 31.950 1.00 44.46 P
ATOM 26 OP1 U B 3 35.054 6.465 30.788 1.00 45.22 O
ATOM 27 OP2 U B 3 36.318 7.592 32.723 1.00 44.09 O
ATOM 28 O5' U B 3 35.466 5.282 32.988 1.00 35.20 O
TER
Atoms:
OP1: (40.464,-6.785,41.937)
OP2: (41.610,-4.584,42.572)
C3': (40.935,-4.766,37.314)
C1': (39.962,-2.637,37.371)
C5': (39.683,-5.565,39.403)
O6: (43.984,1.536,38.791)
O4': (39.309,-3.453,38.335)
C8: (41.336,-1.783,39.350)
C2: (42.245,0.628,35.835)
C6: (43.213,0.906,38.069)
C5: (42.385,-0.191,38.410)
C4: (41.585,-0.739,37.435)
P: (40.547,-5.315,41.830)
C4': (39.630,-4.846,38.087)
C2': (40.691,-3.570,36.410)
O2': (39.833,-3.887,35.329)
N1: (43.076,1.255,36.731)
N2: (42.251,1.095,34.575)
N3: (41.463,-0.386,36.144)
N7: (42.223,-0.861,39.615)
N9: (40.916,-1.759,38.041)
O5': (40.603,-4.953,40.282)
O3': (41.255,-5.940,36.597)
OP2: (41.610,-4.584,42.572)
C3': (40.935,-4.766,37.314)
C1': (39.962,-2.637,37.371)
C5': (39.683,-5.565,39.403)
O6: (43.984,1.536,38.791)
O4': (39.309,-3.453,38.335)
C8: (41.336,-1.783,39.350)
C2: (42.245,0.628,35.835)
C6: (43.213,0.906,38.069)
C5: (42.385,-0.191,38.410)
C4: (41.585,-0.739,37.435)
P: (40.547,-5.315,41.830)
C4': (39.630,-4.846,38.087)
C2': (40.691,-3.570,36.410)
O2': (39.833,-3.887,35.329)
N1: (43.076,1.255,36.731)
N2: (42.251,1.095,34.575)
N3: (41.463,-0.386,36.144)
N7: (42.223,-0.861,39.615)
N9: (40.916,-1.759,38.041)
O5': (40.603,-4.953,40.282)
O3': (41.255,-5.940,36.597)
OP1: (40.892,9.829,31.576)
OP2: (41.675,9.123,33.929)
C3': (38.469,5.592,32.279)
C1': (39.882,3.987,33.272)
C5': (40.377,6.812,31.189)
O6: (41.363,4.122,39.077)
O4': (40.640,4.749,32.349)
C8: (41.180,5.340,34.976)
C2: (39.313,2.008,37.104)
C6: (40.798,3.698,38.076)
C5: (40.829,4.222,36.755)
C4: (40.099,3.593,35.767)
P: (41.488,8.819,32.484)
C4': (39.750,5.480,31.476)
C2': (38.403,4.250,32.997)
O2': (37.880,3.202,32.216)
N1: (40.002,2.562,38.158)
N2: (38.608,0.904,37.377)
N3: (39.319,2.498,35.869)
N7: (41.504,5.322,36.242)
N9: (40.351,4.303,34.616)
O5': (40.625,7.485,32.420)
O3': (37.374,5.770,31.394)
OP2: (41.675,9.123,33.929)
C3': (38.469,5.592,32.279)
C1': (39.882,3.987,33.272)
C5': (40.377,6.812,31.189)
O6: (41.363,4.122,39.077)
O4': (40.640,4.749,32.349)
C8: (41.180,5.340,34.976)
C2: (39.313,2.008,37.104)
C6: (40.798,3.698,38.076)
C5: (40.829,4.222,36.755)
C4: (40.099,3.593,35.767)
P: (41.488,8.819,32.484)
C4': (39.750,5.480,31.476)
C2': (38.403,4.250,32.997)
O2': (37.880,3.202,32.216)
N1: (40.002,2.562,38.158)
N2: (38.608,0.904,37.377)
N3: (39.319,2.498,35.869)
N7: (41.504,5.322,36.242)
N9: (40.351,4.303,34.616)
O5': (40.625,7.485,32.420)
O3': (37.374,5.770,31.394)
Image (generated by PyMOL):